RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	MAP1LC3B	Q9GZQ8	125 aa		12.48	□□□□□ -0.41
TCF3-208	ENST00000586318	ZNF586	Q9NXT0	402 aa		12.48	□□□□□ -0.41
TCF3-208	ENST00000586318	ZNF256	Q9Y2P7	627 aa	Predicted RBP	12.48	□□□□□ -0.41
TCF3-208	ENST00000586318	SOCS3	O14543	225 aa		12.47	□□□□□ -0.41
TCF3-208	ENST00000586318	H2AFB1	P0C5Y9	115 aa		12.47	□□□□□ -0.41
TCF3-208	ENST00000586318	NBEAP1	P0C6P0	100 aa		12.47	□□□□□ -0.41
TCF3-208	ENST00000586318	GCHFR	P30047	84 aa		12.47	□□□□□ -0.41
TCF3-208	ENST00000586318	ZNF680	Q8NEM1	530 aa		12.47	□□□□□ -0.41
TCF3-208	ENST00000586318	SORL1	Q92673	2214 aa		12.47	□□□□□ -0.41
TCF3-208	ENST00000586318	TRBV19	A0A075B6N1	114 aa		12.46	□□□□□ -0.41
TCF3-208	ENST00000586318	ZNF705E	A8MWA4	302 aa	Predicted RBP	12.46	□□□□□ -0.41
TCF3-208	ENST00000586318	ZNF253	O75346	499 aa		12.46	□□□□□ -0.41
TCF3-208	ENST00000586318	IFNA7	P01567	189 aa		12.46	□□□□□ -0.41
TCF3-208	ENST00000586318	SNRPC	P09234	159 aa	Known RBP	12.46	□□□□□ -0.41
TCF3-208	ENST00000586318	PDE6H	Q13956	83 aa		12.46	□□□□□ -0.41
TCF3-208	ENST00000586318	KPRP	Q5T749	579 aa	Predicted RBP	12.46	□□□□□ -0.41
TCF3-208	ENST00000586318	SUN5	Q8TC36	379 aa		12.46	□□□□□ -0.41
TCF3-208	ENST00000586318	SFT2D1	Q8WV19	159 aa		12.46	□□□□□ -0.41
TCF3-208	ENST00000586318	SAT2	Q96F10	170 aa	Predicted RBP	12.46	□□□□□ -0.41
TCF3-208	ENST00000586318	C16orf92	Q96LL3	132 aa		12.46	□□□□□ -0.41
TCF3-208	ENST00000586318	SLC50A1	Q9BRV3	221 aa		12.46	□□□□□ -0.41
TCF3-208	ENST00000586318	TMEM167B	Q9NRX6	74 aa		12.46	□□□□□ -0.41
TCF3-208	ENST00000586318	CMYA5	Q8N3K9	4069 aa		12.46	□□□□□ -0.42
TCF3-208	ENST00000586318	TRAV1-1	A0A0B4J248	108 aa		12.45	□□□□□ -0.42
TCF3-208	ENST00000586318		H3BTX0	84 aa		12.45	□□□□□ -0.42
TCF3-208	ENST00000586318	ISLR	O14498	428 aa		12.45	□□□□□ -0.42
TCF3-208	ENST00000586318	ID1	P41134	155 aa		12.45	□□□□□ -0.42
TCF3-208	ENST00000586318	PSMB3	P49720	205 aa		12.45	□□□□□ -0.42
TCF3-208	ENST00000586318	FGF8	P55075	233 aa	Predicted RBP	12.45	□□□□□ -0.42
TCF3-208	ENST00000586318	KRTAP10-11	P60412	298 aa		12.45	□□□□□ -0.42
TCF3-208	ENST00000586318	LRRC20	Q8TCA0	184 aa		12.45	□□□□□ -0.42
TCF3-208	ENST00000586318	BLNK	Q8WV28	456 aa		12.45	□□□□□ -0.42
TCF3-208	ENST00000586318	ZNF331	Q9NQX6	463 aa	Predicted RBP	12.45	□□□□□ -0.42
TCF3-208	ENST00000586318	SLC17A3	O00476	420 aa		12.44	□□□□□ -0.42
TCF3-208	ENST00000586318	NDUFB4	O95168	129 aa		12.44	□□□□□ -0.42
TCF3-208	ENST00000586318	HBE1	P02100	147 aa		12.44	□□□□□ -0.42
TCF3-208	ENST00000586318	CMC4	P56277	68 aa	Predicted RBP	12.44	□□□□□ -0.42
TCF3-208	ENST00000586318	SNRPD3	P62318	126 aa	Known RBP	12.44	□□□□□ -0.42
TCF3-208	ENST00000586318	BLOC1S1	P78537	153 aa		12.44	□□□□□ -0.42
TCF3-208	ENST00000586318	GTSCR1	Q86UQ5	136 aa		12.44	□□□□□ -0.42
TCF3-208	ENST00000586318	FAM24B	Q8N5W8	94 aa		12.44	□□□□□ -0.42
TCF3-208	ENST00000586318	UBQLN2	Q9UHD9	624 aa		12.44	□□□□□ -0.42
TCF3-208	ENST00000586318	TRAV8-2	A0A0B4J237	113 aa		12.43	□□□□□ -0.42
TCF3-208	ENST00000586318	TEX46	H3BTG2	121 aa		12.43	□□□□□ -0.42
TCF3-208	ENST00000586318	PSG9	Q00887	426 aa		12.43	□□□□□ -0.42
TCF3-208	ENST00000586318	IQCF2	Q8IXL9	164 aa		12.43	□□□□□ -0.42
TCF3-208	ENST00000586318	FAM110A	Q9BQ89	295 aa		12.43	□□□□□ -0.42
TCF3-208	ENST00000586318	CLEC5A	Q9NY25	188 aa		12.43	□□□□□ -0.42
TCF3-208	ENST00000586318	CD7	P09564	240 aa		12.42	□□□□□ -0.42
TCF3-208	ENST00000586318	ZNF688	P0C7X2	276 aa		12.42	□□□□□ -0.42
TCF3-208	ENST00000586318	CD81	P60033	236 aa		12.42	□□□□□ -0.42
TCF3-208	ENST00000586318	ODF3L2	Q3SX64	289 aa		12.42	□□□□□ -0.42
TCF3-208	ENST00000586318	LYPD1	Q8N2G4	141 aa		12.42	□□□□□ -0.42
TCF3-208	ENST00000586318	PRR25	Q96S07	402 aa		12.42	□□□□□ -0.42
TCF3-208	ENST00000586318	TMPRSS5	Q9H3S3	457 aa		12.42	□□□□□ -0.42
TCF3-208	ENST00000586318	MAP6D1	Q9H9H5	199 aa		12.42	□□□□□ -0.42
TCF3-208	ENST00000586318		A0A1B0GV50	99 aa		12.41	□□□□□ -0.42
TCF3-208	ENST00000586318	IFITM2	Q01629	132 aa		12.41	□□□□□ -0.42
TCF3-208	ENST00000586318	C19orf73	Q9NVV2	129 aa		12.41	□□□□□ -0.42
TCF3-208	ENST00000586318	MGAM2	Q2M2H8	2515 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318	OR11H12	B2RN74	326 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318	HLA-DMB	P28068	263 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318	PPT1	P50897	306 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318	DEFB131A	P59861	70 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318	RAN	P62826	216 aa	Known RBP	12.4	□□□□□ -0.42
TCF3-208	ENST00000586318	PSG3	Q16557	428 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318	PSMG4	Q5JS54	123 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318	IGFL4	Q6B9Z1	124 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318	ZNF767P	Q75MW2	155 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318	RNF182	Q8N6D2	247 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318	C20orf173	Q96LM9	149 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318	LINC00052	Q96N35	136 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318		Q9H3A6	140 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318	AAMDC	Q9H7C9	122 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318	PRELID1	Q9Y255	219 aa		12.4	□□□□□ -0.42
TCF3-208	ENST00000586318		A0A1W2PRE2	83 aa		12.39	□□□□□ -0.43
TCF3-208	ENST00000586318		Q8N1Y9	231 aa		12.39	□□□□□ -0.43
TCF3-208	ENST00000586318	EXOC3-AS1	Q8N2X6	119 aa		12.39	□□□□□ -0.43
TCF3-208	ENST00000586318	LYPD6B	Q8NI32	183 aa		12.39	□□□□□ -0.43
TCF3-208	ENST00000586318	MRPL53	Q96EL3	112 aa	Known RBP	12.39	□□□□□ -0.43
TCF3-208	ENST00000586318	OTOR	Q9NRC9	128 aa		12.39	□□□□□ -0.43
TCF3-208	ENST00000586318	ARL2-SNX15	V9GYD0	113 aa		12.39	□□□□□ -0.43
TCF3-208	ENST00000586318	PKD1L1	Q8TDX9	2849 aa		12.39	□□□□□ -0.43
TCF3-208	ENST00000586318	CCL20	P78556	96 aa		12.38	□□□□□ -0.43
TCF3-208	ENST00000586318	ICAM4	Q14773	271 aa		12.38	□□□□□ -0.43
TCF3-208	ENST00000586318	FAM74A7	A6NL05	159 aa		12.37	□□□□□ -0.43
TCF3-208	ENST00000586318	NMB	P08949	121 aa		12.37	□□□□□ -0.43
TCF3-208	ENST00000586318	PMS2P11	Q13670	270 aa		12.37	□□□□□ -0.43
TCF3-208	ENST00000586318	ZNF738	Q8NE65	137 aa		12.37	□□□□□ -0.43
TCF3-208	ENST00000586318	NKX6-2	Q9C056	277 aa	Predicted RBP	12.37	□□□□□ -0.43
TCF3-208	ENST00000586318	MANBAL	Q9NQG1	85 aa		12.37	□□□□□ -0.43
TCF3-208	ENST00000586318	YTHDF2	Q9Y5A9	579 aa	Known RBP	12.37	□□□□□ -0.43
TCF3-208	ENST00000586318	PGP	A6NDG6	321 aa		12.36	□□□□□ -0.43
TCF3-208	ENST00000586318		M0R3E3	92 aa		12.36	□□□□□ -0.43
TCF3-208	ENST00000586318	UBE2G2	P60604	165 aa		12.36	□□□□□ -0.43
TCF3-208	ENST00000586318	FOXI2	Q6ZQN5	318 aa		12.36	□□□□□ -0.43
TCF3-208	ENST00000586318	APRG1	Q8IVJ8	170 aa		12.36	□□□□□ -0.43
TCF3-208	ENST00000586318	RPUSD4	Q96CM3	377 aa	Known RBP	12.36	□□□□□ -0.43
TCF3-208	ENST00000586318	WFDC10A	Q9H1F0	79 aa		12.36	□□□□□ -0.43
TCF3-208	ENST00000586318	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	12.36	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms