RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 RBAKDNA6NC62 111 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 HIGD1CA8MV81 97 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 C16orf97H3BN30 126 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 ATOX1O00244 68 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 TIMM23O14925 209 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 SLC25A20O43772 301 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 NDUFC2O95298 119 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 HBDP02042 147 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 PSMB8P28062 276 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 FAM53BQ14153 422 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 HES3Q5TGS1 186 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 TXNDC8Q6A555 127 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 SLC25A48Q6ZT89 311 aaKnown RBP4.79□□□□□ -1.64
SMAD4-203ENST00000585448 POM121L12Q8N7R1 296 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 KLHDC9Q8NEP7 349 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 MGST2Q99735 147 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 MRPL20Q9BYC9 149 aaKnown RBP4.79□□□□□ -1.64
SMAD4-203ENST00000585448 AICDAQ9GZX7 198 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 ZNF492Q9P255 531 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 PYGO1Q9Y3Y4 419 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 KIAA2026Q5HYC2 2103 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 DOCK9Q9BZ29 2069 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 IGHV3OR15-7A0A075B7D8 119 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 TRAV13-1A0A0B4J241 112 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 LOC107984156A0A0G2JMH3 177 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 MS4A18H0YCH9 400 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 K7EM74 188 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 LGALS9O00182 355 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 CLDN14O95500 239 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 IGKV1-5P01602 117 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 IGLV3-1P01715 115 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 IGKCP01834 107 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 CISD3P0C7P0 127 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 PFN2P35080 140 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 FOXA3P55318 350 aaPredicted RBP4.78□□□□□ -1.64
SMAD4-203ENST00000585448 EDDM3BP56851 147 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 RIGQ13278 110 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 Q6ZR03 302 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 ZNF493Q6ZR52 646 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 Q6ZT83 130 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 LINC00336Q6ZUF6 198 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 RNF144BQ7Z419 303 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 ARL17AQ8IVW1 177 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 Q8N7P7 452 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 RFESDQ8TAC1 157 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 NT5CQ8TCD5 201 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 TRGV9Q99603 122 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 PLA2G2FQ9BZM2 168 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 RPP21Q9H633 154 aaKnown RBP4.78□□□□□ -1.64
SMAD4-203ENST00000585448 C6orf106Q9H6K1 298 aaPredicted RBP4.78□□□□□ -1.64
SMAD4-203ENST00000585448 PLEKHA3Q9HB20 300 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 OCIAD1Q9NX40 245 aa4.78□□□□□ -1.64
SMAD4-203ENST00000585448 TRBV6-6A0A0A6YYG2 114 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 NPIPB11E5RHQ5 1161 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 H3BVH4 76 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 J3QQQ9 107 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 KLK10O43240 276 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 WISP2O76076 250 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 LTAP01374 205 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 UBE2D1P51668 147 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 FBXW4P57775 412 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 NUMA1Q14980 2115 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 OR1C1Q15619 314 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 RSPO1Q2MKA7 263 aaPredicted RBP4.77□□□□□ -1.65
SMAD4-203ENST00000585448 TMEM52BQ4KMG9 183 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 DEFB121Q5J5C9 76 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 RPS19BP1Q86WX3 136 aaKnown RBP4.77□□□□□ -1.65
SMAD4-203ENST00000585448 DRAM1Q8N682 238 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 C3orf56Q8N813 242 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 WDR31Q8NA23 367 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 COPS9Q8WXC6 57 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 ZNF488Q96MN9 340 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 AGPAT4-IT1Q9H0P7 198 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 ZNF442Q9H7R0 627 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 MAP6D1Q9H9H5 199 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 ZNF355PQ9NSJ1 428 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 FANCMQ8IYD8 2048 aa4.77□□□□□ -1.65
SMAD4-203ENST00000585448 TRIP12Q14669 1992 aaPredicted RBP4.76□□□□□ -1.65
SMAD4-203ENST00000585448 LINC01549A6NIU2 74 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 NCBP2LA6PVI3 153 aaKnown RBP4.76□□□□□ -1.65
SMAD4-203ENST00000585448 A8MZ25 164 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 H3BMM0 161 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 TCL1BO95988 128 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 IGKV1-39P01597 117 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 IGKV1D-39P04432 117 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 COL4A2P08572 1712 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 P0DMU3 169 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 FAM231AP0DMU4 169 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 FAM231CP0DMU5 169 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 COX6A1P12074 109 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 PRDX2P32119 198 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 UBE2L3P68036 154 aaKnown RBP4.76□□□□□ -1.65
SMAD4-203ENST00000585448 AAED1Q7RTV5 226 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 LINC00643Q86TS7 51 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 DOCK3Q8IZD9 2030 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 UBE2WQ96B02 151 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 AAMDCQ9H7C9 122 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 PKIGQ9Y2B9 76 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 KIF26BQ2KJY2 2108 aa4.76□□□□□ -1.65
SMAD4-203ENST00000585448 TNS1Q9HBL0 1735 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms