RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 NPVFQ9HCQ7 196 aa9.16□□□□□ -0.94
CDK5RAP3-212ENST00000579175 TRAV1-1A0A0B4J248 108 aa9.15□□□□□ -0.94
CDK5RAP3-212ENST00000579175 CORTO00230 105 aa9.15□□□□□ -0.94
CDK5RAP3-212ENST00000579175 OPRK1P41145 380 aa9.15□□□□□ -0.94
CDK5RAP3-212ENST00000579175 NPBWR1P48145 328 aa9.15□□□□□ -0.94
CDK5RAP3-212ENST00000579175 PVRIGQ6DKI7 326 aa9.15□□□□□ -0.94
CDK5RAP3-212ENST00000579175 FAM24BQ8N5W8 94 aa9.15□□□□□ -0.94
CDK5RAP3-212ENST00000579175 ZNF414Q96IQ9 312 aa9.15□□□□□ -0.94
CDK5RAP3-212ENST00000579175 TMEM231Q9H6L2 316 aa9.15□□□□□ -0.94
CDK5RAP3-212ENST00000579175 CLEC5AQ9NY25 188 aa9.15□□□□□ -0.94
CDK5RAP3-212ENST00000579175 PUS1Q9Y606 427 aaKnown RBP eCLIP9.15□□□□□ -0.94
CDK5RAP3-212ENST00000579175 DEFB131BA0A096LNP1 70 aa9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 SMCO3A2RU48 225 aa9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 KNCNA6PVL3 124 aa9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 H2AFB1P0C5Y9 115 aa9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 NPPCP23582 126 aa9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 GPX4P36969 197 aaPredicted RBP9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 FHITP49789 147 aa9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 AKR1C1Q04828 323 aa9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 MORN3Q6PF18 240 aaPredicted RBP9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 TMEM144Q7Z5S9 345 aa9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 PBDC1Q9BVG4 233 aa9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 VSIRQ9H7M9 311 aa9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 RPRMQ9NS64 109 aa9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 RFNGQ9Y644 331 aa9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 PCLOQ9Y6V0 5065 aa9.14□□□□□ -0.95
CDK5RAP3-212ENST00000579175 ELOA3CA0A087WX78 387 aaPredicted RBP9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 TRAV2A0A0B4J234 112 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 A0A1W2PS18 150 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 ZNF688P0C7X2 276 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 P0DMU3 169 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 FAM231AP0DMU4 169 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 FAM231CP0DMU5 169 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 RAB31Q13636 194 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 ACOT6Q3I5F7 207 aaPredicted RBP9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 ACTL10Q5JWF8 245 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 FFAR4Q5NUL3 377 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 ETFRF1Q6IPR1 90 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 TEPPQ6URK8 271 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 ZNF600Q6ZNG1 722 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 POM121L12Q8N7R1 296 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 MBD3L1Q8WWY6 194 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 NARS2Q96I59 477 aaKnown RBP9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 SLC35E1Q96K37 410 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 MGST2Q99735 147 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 NDUFAF3Q9BU61 184 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 SMDT1Q9H4I9 107 aa9.13□□□□□ -0.95
CDK5RAP3-212ENST00000579175 AGRNO00468 2067 aa9.12□□□□□ -0.95
CDK5RAP3-212ENST00000579175 CTXND1A0A1B0GTU2 59 aa9.12□□□□□ -0.95
CDK5RAP3-212ENST00000579175 A0A1B0GVY2 172 aa9.12□□□□□ -0.95
CDK5RAP3-212ENST00000579175 M6PRP20645 277 aa9.12□□□□□ -0.95
CDK5RAP3-212ENST00000579175 PEA15Q15121 130 aa9.12□□□□□ -0.95
CDK5RAP3-212ENST00000579175 TRPT1Q86TN4 253 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-212ENST00000579175 CCDC28AQ8IWP9 274 aa9.12□□□□□ -0.95
CDK5RAP3-212ENST00000579175 BPIFCQ8NFQ6 507 aa9.12□□□□□ -0.95
CDK5RAP3-212ENST00000579175 LINC00052Q96N35 136 aa9.12□□□□□ -0.95
CDK5RAP3-212ENST00000579175 TMEM218A2RU14 115 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 MAP1LC3B2A6NCE7 125 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 AGPAT2O15120 278 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 GIG44P09565 113 aaPredicted RBP9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 RPL29P47914 159 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 GUK1Q16774 197 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 UBE2DNLQ8IWF7 75 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 OR10G4Q8NGN3 311 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 OR10G9Q8NGN4 311 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 OR10G7Q8NGN6 311 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 SFT2D1Q8WV19 159 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 METTL26Q96S19 204 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 ACTR3CQ9C0K3 210 aaPredicted RBP9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 MAP1LC3BQ9GZQ8 125 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 TREM1Q9NP99 234 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 PXMP4Q9Y6I8 212 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 X6R8D5 127 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 MUC4Q99102 2169 aa9.11□□□□□ -0.95
CDK5RAP3-212ENST00000579175 KIAA1109Q2LD37 5005 aa9.1□□□□□ -0.95
CDK5RAP3-212ENST00000579175 K7EQG2 157 aa9.1□□□□□ -0.95
CDK5RAP3-212ENST00000579175 SCGB2A1O75556 95 aa9.1□□□□□ -0.95
CDK5RAP3-212ENST00000579175 TAGLN2P37802 199 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-212ENST00000579175 CDC34P49427 236 aaPredicted RBP9.1□□□□□ -0.95
CDK5RAP3-212ENST00000579175 B2MP61769 119 aa9.1□□□□□ -0.95
CDK5RAP3-212ENST00000579175 GAMTQ14353 236 aa9.1□□□□□ -0.95
CDK5RAP3-212ENST00000579175 ZNF726P1Q15940 193 aa9.1□□□□□ -0.95
CDK5RAP3-212ENST00000579175 C12orf74Q32Q52 190 aa9.1□□□□□ -0.95
CDK5RAP3-212ENST00000579175 GRAMD2BQ96HH9 432 aa9.1□□□□□ -0.95
CDK5RAP3-212ENST00000579175 SCRT1Q9BWW7 348 aa9.1□□□□□ -0.95
CDK5RAP3-212ENST00000579175 ZFAND3Q9H8U3 227 aa9.1□□□□□ -0.95
CDK5RAP3-212ENST00000579175 CELA1Q9UNI1 258 aa9.1□□□□□ -0.95
CDK5RAP3-212ENST00000579175 CARHSP1Q9Y2V2 147 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-212ENST00000579175 RTL8CO15255 209 aa9.09□□□□□ -0.95
CDK5RAP3-212ENST00000579175 IFNA1P01562 189 aa9.09□□□□□ -0.95
CDK5RAP3-212ENST00000579175 NUTF2P61970 127 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-212ENST00000579175 PSMG4Q5JS54 123 aa9.09□□□□□ -0.95
CDK5RAP3-212ENST00000579175 ZNF506Q5JVG8 444 aa9.09□□□□□ -0.95
CDK5RAP3-212ENST00000579175 C10orf91Q5T1B1 145 aa9.09□□□□□ -0.95
CDK5RAP3-212ENST00000579175 FAM122CQ6P4D5 195 aa9.09□□□□□ -0.95
CDK5RAP3-212ENST00000579175 THAP8Q8NA92 274 aa9.09□□□□□ -0.95
CDK5RAP3-212ENST00000579175 SEC11CQ9BY50 192 aa9.09□□□□□ -0.95
CDK5RAP3-212ENST00000579175 SLC39A9Q9NUM3 307 aa9.09□□□□□ -0.95
CDK5RAP3-212ENST00000579175 SLC45A2Q9UMX9 530 aa9.09□□□□□ -0.95
CDK5RAP3-212ENST00000579175 DNAH10Q8IVF4 4471 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms