RNA–Protein interactions for RNA: ENST00000565018.6

TCF4-226, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-226ENST00000565018 FAM223BA6NKX1 122 aa7.11□□□□□ -1.27
TCF4-226ENST00000565018 HIGD1CA8MV81 97 aa7.11□□□□□ -1.27
TCF4-226ENST00000565018 H3BUA1 57 aa7.11□□□□□ -1.27
TCF4-226ENST00000565018 CIDEAO60543 219 aa7.11□□□□□ -1.27
TCF4-226ENST00000565018 CA1P00915 261 aaPredicted RBP7.11□□□□□ -1.27
TCF4-226ENST00000565018 P01737 135 aa7.11□□□□□ -1.27
TCF4-226ENST00000565018 TCL1AP56279 114 aa7.11□□□□□ -1.27
TCF4-226ENST00000565018 PRR27Q6MZM9 219 aa7.11□□□□□ -1.27
TCF4-226ENST00000565018 GOLT1AQ6ZVE7 132 aa7.11□□□□□ -1.27
TCF4-226ENST00000565018 FAM223AQ8IWN6 122 aa7.11□□□□□ -1.27
TCF4-226ENST00000565018 BCL6BQ8N143 479 aaPredicted RBP7.11□□□□□ -1.27
TCF4-226ENST00000565018 EEF1AKMT3Q96AZ1 226 aa7.11□□□□□ -1.27
TCF4-226ENST00000565018 CCDC140Q96MF4 163 aa7.11□□□□□ -1.27
TCF4-226ENST00000565018 ASH1LQ9NR48 2969 aaKnown RBP7.1□□□□□ -1.27
TCF4-226ENST00000565018 ACACBO00763 2458 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 A6NDX4 124 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 LINC00310P59036 64 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 TOMM20LQ6UXN7 152 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 PRDM13Q9H4Q3 707 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 RPH3ALQ9UNE2 315 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 COL12A1Q99715 3063 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 A0A096LNT2 108 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 TRAV41A0A0B4J266 112 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 G3V318 75 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 IGHG2P01859 326 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 CLEC3BP05452 202 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 IGHV4-38-2P0DP08 117 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 GPR183P32249 361 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 C1orf194Q5T5A4 169 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 MRPL54Q6P161 138 aaKnown RBP7.1□□□□□ -1.27
TCF4-226ENST00000565018 TMEM256Q8N2U0 113 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 ZNF843Q8N446 348 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 DAZAP1Q96EP5 407 aaKnown RBP7.1□□□□□ -1.27
TCF4-226ENST00000565018 SGK494Q96LW2 274 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 BBC3Q96PG8 261 aaPredicted RBP7.1□□□□□ -1.27
TCF4-226ENST00000565018 PSG8Q9UQ74 426 aa7.1□□□□□ -1.27
TCF4-226ENST00000565018 TRAV8-1A0A0A6YYK1 113 aa7.09□□□□□ -1.27
TCF4-226ENST00000565018 LINC01548A6NM66 108 aa7.09□□□□□ -1.27
TCF4-226ENST00000565018 ZNF785A8K8V0 405 aa7.09□□□□□ -1.27
TCF4-226ENST00000565018 BUB3O43684 328 aa7.09□□□□□ -1.27
TCF4-226ENST00000565018 IGHV3-23P01764 117 aa7.09□□□□□ -1.27
TCF4-226ENST00000565018 GZMBP10144 247 aa7.09□□□□□ -1.27
TCF4-226ENST00000565018 CSN1S1P47710 185 aa7.09□□□□□ -1.27
TCF4-226ENST00000565018 BRD3OSQ6XYD6 125 aa7.09□□□□□ -1.27
TCF4-226ENST00000565018 VPS13CQ709C8 3753 aa7.09□□□□□ -1.27
TCF4-226ENST00000565018 CLPSL1A2RUU4 121 aa7.09□□□□□ -1.28
TCF4-226ENST00000565018 GRIFINA4D1Z8 144 aa7.09□□□□□ -1.28
TCF4-226ENST00000565018 APCSP02743 223 aa7.09□□□□□ -1.28
TCF4-226ENST00000565018 COL8A1P27658 744 aa7.09□□□□□ -1.28
TCF4-226ENST00000565018 ODF1Q14990 250 aa7.09□□□□□ -1.28
TCF4-226ENST00000565018 RBPMS2Q6ZRY4 209 aaKnown RBP7.09□□□□□ -1.28
TCF4-226ENST00000565018 PRNTQ86SH4 94 aa7.09□□□□□ -1.28
TCF4-226ENST00000565018 GTSF1Q8WW33 167 aa7.09□□□□□ -1.28
TCF4-226ENST00000565018 SMAD5-AS1Q9Y6J3 95 aa7.09□□□□□ -1.28
TCF4-226ENST00000565018 U3KQE9 123 aa7.09□□□□□ -1.28
TCF4-226ENST00000565018 MED13LQ71F56 2210 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 USP24Q9UPU5 2620 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 SVEP1Q4LDE5 3571 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 USP9XQ93008 2570 aaPredicted RBP7.08□□□□□ -1.28
TCF4-226ENST00000565018 HSBP1L1C9JCN9 74 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 J3QLI3 93 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 NUPR1O60356 82 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 PPIFP30405 207 aaKnown RBP7.08□□□□□ -1.28
TCF4-226ENST00000565018 SLC35B1P78383 322 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 CDPF1Q6NVV7 123 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 CIARTQ8N365 385 aaPredicted RBP7.08□□□□□ -1.28
TCF4-226ENST00000565018 GATD1Q8NB37 220 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 GNB4Q9HAV0 340 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 A8MWP6 167 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 M0R3E3 92 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 SPINK4O60575 86 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 SERF1AO75920 110 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 COX6B1P14854 86 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 TPPP2P59282 170 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 RAB4BP61018 213 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 HBBP68871 147 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 ATP5G2Q06055 141 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 SRSF1Q07955 248 aaKnown RBP eCLIP7.08□□□□□ -1.28
TCF4-226ENST00000565018 SLAQ13239 276 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 KLF5Q13887 457 aaPredicted RBP7.08□□□□□ -1.28
TCF4-226ENST00000565018 SAPCD1Q5SSQ6 148 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 DMRTA1Q5VZB9 504 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 Q6AWC8 147 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 TMEM219Q86XT9 240 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 ZC2HC1AQ96GY0 325 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 SLC50A1Q9BRV3 221 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 HIF1ANQ9NWT6 349 aa7.08□□□□□ -1.28
TCF4-226ENST00000565018 IGHV3OR16-10A0A075B7F0 116 aa7.07□□□□□ -1.28
TCF4-226ENST00000565018 A0A1B0GUS0 222 aa7.07□□□□□ -1.28
TCF4-226ENST00000565018 RBAKDNA6NC62 111 aa7.07□□□□□ -1.28
TCF4-226ENST00000565018 IGHG4P01861 327 aa7.07□□□□□ -1.28
TCF4-226ENST00000565018 APOHP02749 345 aaPredicted RBP7.07□□□□□ -1.28
TCF4-226ENST00000565018 IQCJQ1A5X6 159 aa7.07□□□□□ -1.28
TCF4-226ENST00000565018 GDF5OSQ5U4N7 250 aa7.07□□□□□ -1.28
TCF4-226ENST00000565018 CLEC19AQ6UXS0 136 aa7.07□□□□□ -1.28
TCF4-226ENST00000565018 BAGE3Q86Y29 109 aa7.07□□□□□ -1.28
TCF4-226ENST00000565018 LINC01356Q8N9X3 169 aa7.07□□□□□ -1.28
TCF4-226ENST00000565018 MRPL53Q96EL3 112 aaKnown RBP7.07□□□□□ -1.28
TCF4-226ENST00000565018 USMG5Q96IX5 58 aa7.07□□□□□ -1.28
TCF4-226ENST00000565018 AKAP6Q13023 2319 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms