RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 TSSC4Q9Y5U2 329 aaPredicted RBP10.72□□□□□ -0.69
SPG7-206ENST00000562775 ZNF785A8K8V0 405 aa10.71□□□□□ -0.69
SPG7-206ENST00000562775 A8MWP6 167 aa10.71□□□□□ -0.69
SPG7-206ENST00000562775 ZNF253O75346 499 aa10.71□□□□□ -0.69
SPG7-206ENST00000562775 SNAPINO95295 136 aa10.71□□□□□ -0.69
SPG7-206ENST00000562775 MEOX2P50222 304 aa10.71□□□□□ -0.69
SPG7-206ENST00000562775 KLF5Q13887 457 aaPredicted RBP10.71□□□□□ -0.69
SPG7-206ENST00000562775 ZNF674Q2M3X9 581 aa10.71□□□□□ -0.69
SPG7-206ENST00000562775 DEFB136Q30KP8 78 aa10.71□□□□□ -0.69
SPG7-206ENST00000562775 SIGLEC15Q6ZMC9 328 aa10.71□□□□□ -0.69
SPG7-206ENST00000562775 C1QL4Q86Z23 238 aa10.71□□□□□ -0.69
SPG7-206ENST00000562775 C11orf44Q8N8P7 122 aa10.71□□□□□ -0.69
SPG7-206ENST00000562775 C5orf17Q8NAS9 161 aa10.71□□□□□ -0.69
SPG7-206ENST00000562775 HIST1H2BAQ96A08 127 aa10.71□□□□□ -0.69
SPG7-206ENST00000562775 CITED2Q99967 270 aaPredicted RBP10.71□□□□□ -0.69
SPG7-206ENST00000562775 SLC25A5P05141 298 aaKnown RBP10.7□□□□□ -0.7
SPG7-206ENST00000562775 SYNJ2BPP57105 145 aa10.7□□□□□ -0.7
SPG7-206ENST00000562775 PSG9Q00887 426 aa10.7□□□□□ -0.7
SPG7-206ENST00000562775 TVP23CQ96ET8 276 aa10.7□□□□□ -0.7
SPG7-206ENST00000562775 RHPN1-AS1Q9BWJ2 59 aa10.7□□□□□ -0.7
SPG7-206ENST00000562775 EPDR1Q9UM22 224 aa10.7□□□□□ -0.7
SPG7-206ENST00000562775 TMEM213A2RRL7 107 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 SLC17A3O00476 420 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 CHEK1O14757 476 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 BMI1P35226 326 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 TMEM241Q24JQ0 296 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 C8orf86Q6ZUL3 223 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 EXOC3-AS1Q8N2X6 119 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 CLRN3Q8NCR9 226 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 C2CD4CQ8TF44 421 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 DERL1Q9BUN8 251 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 AAMDCQ9H7C9 122 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 SDF2L1Q9HCN8 221 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 NAT8Q9UHE5 227 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 PEX7O00628 323 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 SLURP1P55000 103 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 PNRC1Q12796 327 aaPredicted RBP10.69□□□□□ -0.7
SPG7-206ENST00000562775 HIST2H2BDQ6DRA6 164 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 CMTM2Q8TAZ6 248 aa10.69□□□□□ -0.7
SPG7-206ENST00000562775 HELTA6NFD8 242 aa10.68□□□□□ -0.7
SPG7-206ENST00000562775 M0R036 132 aa10.68□□□□□ -0.7
SPG7-206ENST00000562775 TCRAP04437 139 aa10.68□□□□□ -0.7
SPG7-206ENST00000562775 AKR1C3P42330 323 aa10.68□□□□□ -0.7
SPG7-206ENST00000562775 RPL35P42766 123 aaKnown RBP10.68□□□□□ -0.7
SPG7-206ENST00000562775 GNG5P63218 68 aa10.68□□□□□ -0.7
SPG7-206ENST00000562775 ATRAIDQ6UW56 229 aa10.68□□□□□ -0.7
SPG7-206ENST00000562775 SLC50A1Q9BRV3 221 aa10.68□□□□□ -0.7
SPG7-206ENST00000562775 ATG101Q9BSB4 218 aa10.68□□□□□ -0.7
SPG7-206ENST00000562775 ZNF331Q9NQX6 463 aaPredicted RBP10.68□□□□□ -0.7
SPG7-206ENST00000562775 C2CD3Q4AC94 2353 aa10.67□□□□□ -0.7
SPG7-206ENST00000562775 CUBNO60494 3623 aa10.67□□□□□ -0.7
SPG7-206ENST00000562775 A0A1W2PRX2 142 aa10.67□□□□□ -0.7
SPG7-206ENST00000562775 C9JCJ5 164 aa10.67□□□□□ -0.7
SPG7-206ENST00000562775 CNN1P51911 297 aaKnown RBP10.67□□□□□ -0.7
SPG7-206ENST00000562775 FHL3Q13643 280 aa10.67□□□□□ -0.7
SPG7-206ENST00000562775 AWAT1Q58HT5 328 aa10.67□□□□□ -0.7
SPG7-206ENST00000562775 ARL6IP6Q8N6S5 226 aa10.67□□□□□ -0.7
SPG7-206ENST00000562775 RAX2Q96IS3 184 aa10.67□□□□□ -0.7
SPG7-206ENST00000562775 DUX3Q96PT4 197 aa10.67□□□□□ -0.7
SPG7-206ENST00000562775 TRBV20OR9-2A0A075B6H5 130 aa10.66□□□□□ -0.7
SPG7-206ENST00000562775 C2orf70A6NJV1 201 aa10.66□□□□□ -0.7
SPG7-206ENST00000562775 CCL24O00175 119 aa10.66□□□□□ -0.7
SPG7-206ENST00000562775 EDN2P20800 178 aa10.66□□□□□ -0.7
SPG7-206ENST00000562775 CBLN1P23435 193 aa10.66□□□□□ -0.7
SPG7-206ENST00000562775 TAS2R60P59551 318 aa10.66□□□□□ -0.7
SPG7-206ENST00000562775 FOXL1Q12952 345 aa10.66□□□□□ -0.7
SPG7-206ENST00000562775 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.66□□□□□ -0.7
SPG7-206ENST00000562775 PEMTQ9UBM1 199 aa10.66□□□□□ -0.7
SPG7-206ENST00000562775 M0R3E3 92 aa10.65□□□□□ -0.7
SPG7-206ENST00000562775 S100A9P06702 114 aaKnown RBP10.65□□□□□ -0.7
SPG7-206ENST00000562775 CSN1S1P47710 185 aa10.65□□□□□ -0.7
SPG7-206ENST00000562775 RPL23P62829 140 aaKnown RBP10.65□□□□□ -0.7
SPG7-206ENST00000562775 OR9G4Q8NGQ1 327 aa10.65□□□□□ -0.7
SPG7-206ENST00000562775 DLX4Q92988 240 aaPredicted RBP10.65□□□□□ -0.7
SPG7-206ENST00000562775 CLEC5AQ9NY25 188 aa10.65□□□□□ -0.7
SPG7-206ENST00000562775 RPH3ALQ9UNE2 315 aa10.65□□□□□ -0.7
SPG7-206ENST00000562775 PRELID1Q9Y255 219 aa10.65□□□□□ -0.7
SPG7-206ENST00000562775 KLF12Q9Y4X4 402 aa10.65□□□□□ -0.7
SPG7-206ENST00000562775 LY96Q9Y6Y9 160 aa10.65□□□□□ -0.7
SPG7-206ENST00000562775 SETD2Q9BYW2 2564 aaPredicted RBP10.65□□□□□ -0.71
SPG7-206ENST00000562775 C7orf77A4D0Y5 90 aa10.65□□□□□ -0.71
SPG7-206ENST00000562775 ADARB2-AS1A8MUL3 147 aa10.65□□□□□ -0.71
SPG7-206ENST00000562775 B4DEV8 164 aa10.65□□□□□ -0.71
SPG7-206ENST00000562775 M0QZ24 198 aa10.65□□□□□ -0.71
SPG7-206ENST00000562775 SCO1O75880 301 aa10.65□□□□□ -0.71
SPG7-206ENST00000562775 FOLR2P14207 255 aa10.65□□□□□ -0.71
SPG7-206ENST00000562775 KRTAP10-3P60369 221 aa10.65□□□□□ -0.71
SPG7-206ENST00000562775 RHEBQ15382 184 aa10.65□□□□□ -0.71
SPG7-206ENST00000562775 TMEM183BQ1AE95 376 aa10.65□□□□□ -0.71
SPG7-206ENST00000562775 TCF24Q7RTU0 167 aa10.65□□□□□ -0.71
SPG7-206ENST00000562775 LINC00479Q96M42 142 aa10.65□□□□□ -0.71
SPG7-206ENST00000562775 NRN1Q9NPD7 142 aa10.65□□□□□ -0.71
SPG7-206ENST00000562775 TRAV8-2A0A0B4J237 113 aa10.64□□□□□ -0.71
SPG7-206ENST00000562775 DIRC3C9JPN6 131 aa10.64□□□□□ -0.71
SPG7-206ENST00000562775 GNG4P50150 75 aa10.64□□□□□ -0.71
SPG7-206ENST00000562775 UBE2G1P62253 170 aa10.64□□□□□ -0.71
SPG7-206ENST00000562775 RPL11P62913 178 aaKnown RBP10.64□□□□□ -0.71
SPG7-206ENST00000562775 ADIRFQ15847 76 aa10.64□□□□□ -0.71
SPG7-206ENST00000562775 CENPWQ5EE01 88 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms