RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 GLRX5Q86SX6 157 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 NAA38Q9BRA0 125 aaKnown RBP9.11□□□□□ -0.95
RPAP1-204ENST00000562303 KLK9Q9UKQ9 250 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 GAGE12BA1L429 117 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 GAGE7O76087 117 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 GAGE12FP0CL80 117 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 GAGE12GP0CL81 117 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 GAGE12IP0CL82 117 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 AZU1P20160 251 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 RMI2Q96E14 147 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 SIGMAR1Q99720 223 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 SRSF8Q9BRL6 282 aaKnown RBP9.11□□□□□ -0.95
RPAP1-204ENST00000562303 PAX9P55771 341 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 OCIAD2Q56VL3 154 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 ZMAT4Q9H898 229 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 TNFRSF6BO95407 300 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 NMSQ5H8A3 153 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 TMEM14EPQ6UXP3 125 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 PNRC2Q9NPJ4 139 aaKnown RBP9.11□□□□□ -0.95
RPAP1-204ENST00000562303 C5orf63A6NC05 138 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 RNASE2P10153 161 aaKnown RBP9.1□□□□□ -0.95
RPAP1-204ENST00000562303 PMVKQ15126 192 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 RBMY1FQ15415 496 aaKnown RBP9.1□□□□□ -0.95
RPAP1-204ENST00000562303 SHANK2-AS3Q9BTD1 123 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 RHODO00212 210 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 B3GALT5-AS1P59052 145 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 NDUFAF3Q9BU61 184 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 GAGE2AQ6NT46 116 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 AMN1Q8IY45 258 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 CLPSP04118 112 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 GAGE2BQ13066 116 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 MLANAQ16655 118 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 LINC01551Q86U37 167 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 LHFPL1Q86WI0 220 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 ARHGEF17Q96PE2 2063 aaPredicted RBP9.1□□□□□ -0.95
RPAP1-204ENST00000562303 FGF16O43320 207 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 RPP25LQ8N5L8 163 aaKnown RBP9.1□□□□□ -0.95
RPAP1-204ENST00000562303 THAP8Q8NA92 274 aa9.1□□□□□ -0.95
RPAP1-204ENST00000562303 DICER1Q9UPY3 1922 aaKnown RBP9.09□□□□□ -0.95
RPAP1-204ENST00000562303 GAS1P54826 345 aa9.09□□□□□ -0.95
RPAP1-204ENST00000562303 PTPRFP10586 1907 aa9.09□□□□□ -0.95
RPAP1-204ENST00000562303 IGKV1-16P04430 117 aa9.09□□□□□ -0.95
RPAP1-204ENST00000562303 MRAPQ8TCY5 172 aa9.09□□□□□ -0.95
RPAP1-204ENST00000562303 TRBV6-6A0A0A6YYG2 114 aa9.09□□□□□ -0.95
RPAP1-204ENST00000562303 hDV102S1A0JD36 115 aa9.09□□□□□ -0.95
RPAP1-204ENST00000562303 PFN2P35080 140 aa9.09□□□□□ -0.95
RPAP1-204ENST00000562303 Q86TA4 180 aa9.09□□□□□ -0.95
RPAP1-204ENST00000562303 TMEM242Q9NWH2 141 aa9.09□□□□□ -0.95
RPAP1-204ENST00000562303 CACNA1EQ15878 2313 aa9.09□□□□□ -0.96
RPAP1-204ENST00000562303 IGHV2-70DA0A0C4DH43 119 aa9.08□□□□□ -0.96
RPAP1-204ENST00000562303 RBBP6Q7Z6E9 1792 aaKnown RBP9.08□□□□□ -0.96
RPAP1-204ENST00000562303 VWC2Q2TAL6 325 aa9.08□□□□□ -0.96
RPAP1-204ENST00000562303 G3V318 75 aa9.08□□□□□ -0.96
RPAP1-204ENST00000562303 ZNRD1Q9P1U0 126 aa9.08□□□□□ -0.96
RPAP1-204ENST00000562303 NDUFB8O95169 186 aa9.08□□□□□ -0.96
RPAP1-204ENST00000562303 CXCL1P09341 107 aa9.08□□□□□ -0.96
RPAP1-204ENST00000562303 GAGE6Q13070 117 aa9.08□□□□□ -0.96
RPAP1-204ENST00000562303 TCTEX1D4Q5JR98 221 aa9.08□□□□□ -0.96
RPAP1-204ENST00000562303 HIST1H2BLQ99880 126 aa9.08□□□□□ -0.96
RPAP1-204ENST00000562303 TRAV1-1A0A0B4J248 108 aa9.08□□□□□ -0.96
RPAP1-204ENST00000562303 A0A1W2PPI3 338 aa9.08□□□□□ -0.96
RPAP1-204ENST00000562303 ADAMTS7Q9UKP4 1686 aa9.08□□□□□ -0.96
RPAP1-204ENST00000562303 C15orf62A8K5M9 175 aa9.07□□□□□ -0.96
RPAP1-204ENST00000562303 ZC2HC1BQ5TFG8 222 aa9.07□□□□□ -0.96
RPAP1-204ENST00000562303 ZFAND6Q6FIF0 208 aa9.07□□□□□ -0.96
RPAP1-204ENST00000562303 CRIPAKQ8N1N5 446 aa9.07□□□□□ -0.96
RPAP1-204ENST00000562303 J3QLI3 93 aa9.07□□□□□ -0.96
RPAP1-204ENST00000562303 KLF5Q13887 457 aaPredicted RBP9.07□□□□□ -0.96
RPAP1-204ENST00000562303 KLHDC3Q9BQ90 382 aa9.07□□□□□ -0.96
RPAP1-204ENST00000562303 TRBV24-1A0A075B6N3 115 aa9.07□□□□□ -0.96
RPAP1-204ENST00000562303 PDE6HQ13956 83 aa9.07□□□□□ -0.96
RPAP1-204ENST00000562303 PATJQ8NI35 1801 aa9.07□□□□□ -0.96
RPAP1-204ENST00000562303 TP53TG1Q9Y2A0 90 aa9.07□□□□□ -0.96
RPAP1-204ENST00000562303 CFHR2P36980 270 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 ZNRF2Q8NHG8 242 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 LY96Q9Y6Y9 160 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 A0A096LPF7 62 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 I3L3M4 83 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 TMEM243Q9BU79 118 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 DOPEY2Q9Y3R5 2298 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 IGHV1OR15-1A0A075B7D0 117 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 NXPH4O95158 308 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 A0A087X0K7 114 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 PLXNA1Q9UIW2 1896 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 WDR90Q96KV7 1748 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 TRAV25A0A0B4J276 109 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 IGHV3-38A0A0C4DH36 116 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 ZNF581Q9P0T4 197 aa9.06□□□□□ -0.96
RPAP1-204ENST00000562303 GVINP1Q7Z2Y8 2422 aa9.05□□□□□ -0.96
RPAP1-204ENST00000562303 C22orf46C9J442 243 aa9.05□□□□□ -0.96
RPAP1-204ENST00000562303 ANXA2RQ3ZCQ2 193 aa9.05□□□□□ -0.96
RPAP1-204ENST00000562303 DOCK3Q8IZD9 2030 aa9.05□□□□□ -0.96
RPAP1-204ENST00000562303 NRXN2Q9P2S2 1712 aa9.05□□□□□ -0.96
RPAP1-204ENST00000562303 TRAV12-2A0A075B6T6 113 aa9.05□□□□□ -0.96
RPAP1-204ENST00000562303 RNF144BQ7Z419 303 aa9.05□□□□□ -0.96
RPAP1-204ENST00000562303 C8orf49Q96NF6 230 aa9.05□□□□□ -0.96
RPAP1-204ENST00000562303 CHAC1Q9BUX1 264 aa9.05□□□□□ -0.96
RPAP1-204ENST00000562303 BRCA1P38398 1863 aaKnown RBP9.05□□□□□ -0.96
RPAP1-204ENST00000562303 SYS1-DBNDD2H3BUS1 97 aa9.05□□□□□ -0.96
RPAP1-204ENST00000562303 CYTL1Q9NRR1 136 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms