RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 NDUFS7O75251 213 aa13.07□□□□□ -0.32
TPM1-228ENST00000560975 CNTFRP26992 372 aa13.07□□□□□ -0.32
TPM1-228ENST00000560975 CCL8P80075 99 aa13.07□□□□□ -0.32
TPM1-228ENST00000560975 PRB3Q04118 309 aaPredicted RBP13.06□□□□□ -0.32
TPM1-228ENST00000560975 MRPL51Q4U2R6 128 aaKnown RBP13.06□□□□□ -0.32
TPM1-228ENST00000560975 NHP2Q9NX24 153 aaKnown RBP13.06□□□□□ -0.32
TPM1-228ENST00000560975 GLRXP35754 106 aa13.06□□□□□ -0.32
TPM1-228ENST00000560975 FAM104BQ5XKR9 115 aa13.06□□□□□ -0.32
TPM1-228ENST00000560975 PLSCR4Q9NRQ2 329 aa13.06□□□□□ -0.32
TPM1-228ENST00000560975 NPYP01303 97 aa13.06□□□□□ -0.32
TPM1-228ENST00000560975 MRGPRG-AS1Q2M3A8 158 aa13.06□□□□□ -0.32
TPM1-228ENST00000560975 TMEM200BQ69YZ2 307 aa13.06□□□□□ -0.32
TPM1-228ENST00000560975 TMEM133Q9H2Q1 129 aa13.06□□□□□ -0.32
TPM1-228ENST00000560975 COL27A1Q8IZC6 1860 aaPredicted RBP13.05□□□□□ -0.32
TPM1-228ENST00000560975 KALRNO60229 2985 aa13.05□□□□□ -0.32
TPM1-228ENST00000560975 MAP1BP46821 2468 aaKnown RBP13.05□□□□□ -0.32
TPM1-228ENST00000560975 PPIAL4EA0A075B759 164 aa13.05□□□□□ -0.32
TPM1-228ENST00000560975 PPIAL4FP0DN26 164 aa13.05□□□□□ -0.32
TPM1-228ENST00000560975 CKS2P33552 79 aa13.05□□□□□ -0.32
TPM1-228ENST00000560975 RPL27AP46776 148 aaKnown RBP13.05□□□□□ -0.32
TPM1-228ENST00000560975 WFDC2Q14508 124 aa13.05□□□□□ -0.32
TPM1-228ENST00000560975 TDHQ8IZJ6 230 aa13.05□□□□□ -0.32
TPM1-228ENST00000560975 MTURNQ8N3F0 131 aa13.05□□□□□ -0.32
TPM1-228ENST00000560975 A0A1B0GW15 77 aa13.05□□□□□ -0.32
TPM1-228ENST00000560975 PRR33A8MZF0 331 aa13.05□□□□□ -0.32
TPM1-228ENST00000560975 WT1P19544 449 aaPredicted RBP13.05□□□□□ -0.32
TPM1-228ENST00000560975 TMEM108Q6UXF1 575 aa13.05□□□□□ -0.32
TPM1-228ENST00000560975 GATD1Q8NB37 220 aa13.05□□□□□ -0.32
TPM1-228ENST00000560975 HOXB4P17483 251 aaPredicted RBP13.04□□□□□ -0.32
TPM1-228ENST00000560975 VGLL1Q99990 258 aa13.04□□□□□ -0.32
TPM1-228ENST00000560975 CT45A10P0DMU9 189 aa13.04□□□□□ -0.32
TPM1-228ENST00000560975 GATA4P43694 442 aa13.04□□□□□ -0.32
TPM1-228ENST00000560975 CCL11P51671 97 aa13.04□□□□□ -0.32
TPM1-228ENST00000560975 DLX1P56177 255 aa13.04□□□□□ -0.32
TPM1-228ENST00000560975 CHAC1Q9BUX1 264 aa13.04□□□□□ -0.32
TPM1-228ENST00000560975 DKK4Q9UBT3 224 aa13.04□□□□□ -0.32
TPM1-228ENST00000560975 TPRP12270 2363 aaKnown RBP13.03□□□□□ -0.32
TPM1-228ENST00000560975 GAGE12HA6NDE8 117 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 ZNF493Q6ZR52 646 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 SH2D6Q7Z4S9 175 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 TMEM75Q8N9X5 138 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 NGBQ9NPG2 151 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 PKDREJQ9NTG1 2253 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 TMEM189A5PLL7 270 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 K7EQM0 130 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 FCN3O75636 299 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 IGHG3P01860 377 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 TMEM30BQ3MIR4 351 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 TRBV19A0A075B6N1 114 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 FTH1P19P0C7X4 201 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 GTSCR1Q86UQ5 136 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 RASL11BQ9BPW5 248 aa13.03□□□□□ -0.32
TPM1-228ENST00000560975 WI2-2373I1.2A0A1W2PRP0 233 aa13.02□□□□□ -0.33
TPM1-228ENST00000560975 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.02□□□□□ -0.33
TPM1-228ENST00000560975 LAMTOR5O43504 91 aa13.02□□□□□ -0.33
TPM1-228ENST00000560975 TWIST1Q15672 202 aa13.02□□□□□ -0.33
TPM1-228ENST00000560975 U3KQK5 164 aa13.02□□□□□ -0.33
TPM1-228ENST00000560975 TRIOBPQ9H2D6 2365 aa13.02□□□□□ -0.33
TPM1-228ENST00000560975 IGLV3-9A0A075B6K5 115 aa13.02□□□□□ -0.33
TPM1-228ENST00000560975 PRSS1P07477 247 aa13.02□□□□□ -0.33
TPM1-228ENST00000560975 PAX8Q06710 450 aa13.02□□□□□ -0.33
TPM1-228ENST00000560975 SIGLEC15Q6ZMC9 328 aa13.02□□□□□ -0.33
TPM1-228ENST00000560975 TMEM14CQ9P0S9 112 aa13.02□□□□□ -0.33
TPM1-228ENST00000560975 CD300EQ496F6 205 aaPredicted RBP13.01□□□□□ -0.33
TPM1-228ENST00000560975 Q6AWC8 147 aa13.01□□□□□ -0.33
TPM1-228ENST00000560975 ARPC1AQ92747 370 aa13.01□□□□□ -0.33
TPM1-228ENST00000560975 CEP250Q9BV73 2442 aa13.01□□□□□ -0.33
TPM1-228ENST00000560975 GAS8-AS1O95177 125 aa13.01□□□□□ -0.33
TPM1-228ENST00000560975 ETDBQ3ZM63 59 aa13.01□□□□□ -0.33
TPM1-228ENST00000560975 AMTNQ6UX39 209 aa13.01□□□□□ -0.33
TPM1-228ENST00000560975 H3BMG7 143 aa13□□□□□ -0.33
TPM1-228ENST00000560975 SH2D1AO60880 128 aa13□□□□□ -0.33
TPM1-228ENST00000560975 SCNM1Q9BWG6 230 aa13□□□□□ -0.33
TPM1-228ENST00000560975 S4R3C0 116 aa13□□□□□ -0.33
TPM1-228ENST00000560975 LEPP41159 167 aa13□□□□□ -0.33
TPM1-228ENST00000560975 SPANXB1Q9NS25 103 aaPredicted RBP13□□□□□ -0.33
TPM1-228ENST00000560975 TRBV25-1A0A075B6N4 114 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 SPAARA0A1B0GVQ0 90 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 CEACAM3P40198 252 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 PHLDA1Q8WV24 401 aaPredicted RBP12.99□□□□□ -0.33
TPM1-228ENST00000560975 DMXL2Q8TDJ6 3036 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 A0A1B0GV72 72 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 CCDC144NLQ6NUI1 221 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 ZNF474Q6S9Z5 364 aaPredicted RBP12.99□□□□□ -0.33
TPM1-228ENST00000560975 LYPD2Q6UXB3 125 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 ATP6V0BQ99437 205 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 MSRB1Q9NZV6 116 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 TRBV6-1A0A0K0K1D8 114 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 C19orf67A6NJJ6 358 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 EVI2AP22794 236 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 SRSF6Q13247 344 aaKnown RBP12.99□□□□□ -0.33
TPM1-228ENST00000560975 ZNF562Q6V9R5 426 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 C22orf34Q6ZV56 151 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 FDCSPQ8NFU4 85 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 HHLA3Q9XRX5 114 aa12.99□□□□□ -0.33
TPM1-228ENST00000560975 MALRD1Q5VYJ5 2156 aa12.98□□□□□ -0.33
TPM1-228ENST00000560975 IGKV1-17P01599 117 aa12.98□□□□□ -0.33
TPM1-228ENST00000560975 ODF1Q14990 250 aa12.98□□□□□ -0.33
TPM1-228ENST00000560975 TEX36Q5VZQ5 186 aa12.98□□□□□ -0.33
TPM1-228ENST00000560975 SPAG8Q99932 426 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms