RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 RRAS2P62070 204 aaPredicted RBP7.26□□□□□ -1.25
USP3-207ENST00000558218 IL15RAQ13261 267 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 ASAH1Q13510 395 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 C12orf74Q32Q52 190 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 GSG1LQ6UXU4 331 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 PATE2Q6UY27 113 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 Q6ZRG5 221 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 CHAC2Q8WUX2 184 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 FAM210BQ96KR6 192 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 C20orf173Q96LM9 149 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 IGF2BP2-AS1Q96M15 143 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 SCRT1Q9BWW7 348 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 ARL6Q9H0F7 186 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 ARV1Q9H2C2 271 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 DEFB131BA0A096LNP1 70 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 TRAV8-2A0A0B4J237 113 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 FAM25EA8MYX2 175 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 F6UB75 175 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 CCNKO75909 580 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 IGKV3-20P01619 116 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 HBE1P02100 147 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 CXCL3P19876 107 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 BCAP31P51572 246 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 ARL16Q0P5N6 197 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 ATP6V1FQ16864 119 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 VWC2Q2TAL6 325 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 AMTNQ6UX39 209 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 Q6ZTC4 211 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 BPIFA4PQ86YQ2 179 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 SLC50A1Q9BRV3 221 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 SLC35B3Q9H1N7 401 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 C11orf1Q9H5F2 150 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 GPN1Q9HCN4 374 aaPredicted RBP7.25□□□□□ -1.25
USP3-207ENST00000558218 DNAJC4Q9NNZ3 241 aa7.25□□□□□ -1.25
USP3-207ENST00000558218 LYRM2Q9NU23 88 aaPredicted RBP7.25□□□□□ -1.25
USP3-207ENST00000558218 IGHV4-4A0A075B6R2 117 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 MRPS12O15235 138 aaKnown RBP7.24□□□□□ -1.25
USP3-207ENST00000558218 CAMLGP49069 296 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 SULT1A1P50225 295 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 CAV2P51636 162 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 CNN1P51911 297 aaKnown RBP7.24□□□□□ -1.25
USP3-207ENST00000558218 FXYD7P58549 80 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 DEFB1P60022 68 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 HBG1P69891 147 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 HBG2P69892 147 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 FGL1Q08830 312 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 SLC38A11Q08AI6 406 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 PSG3Q16557 428 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 RRN3P1Q2M238 152 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 LCN15Q6UWW0 184 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 LINC00305Q7Z4B0 112 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 C1orf158Q8N1D5 194 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 LRRC20Q8TCA0 184 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 UHRF2Q96PU4 802 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 PFDN5Q99471 154 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 SEC22CQ9BRL7 303 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 DKK2Q9UBU2 259 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 WDR83OSQ9Y284 106 aa7.24□□□□□ -1.25
USP3-207ENST00000558218 LSM5Q9Y4Y9 91 aaKnown RBP7.24□□□□□ -1.25
USP3-207ENST00000558218 FAM24AA6NFZ4 105 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 CCSO14618 274 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 COX7A2P2O60397 106 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 PRAF2O60831 178 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 MPDU1O75352 247 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 UPK1BO75841 260 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 TSPOP30536 169 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 RPL29P47914 159 aaKnown RBP7.23□□□□□ -1.25
USP3-207ENST00000558218 SRSF3P84103 164 aaKnown RBP7.23□□□□□ -1.25
USP3-207ENST00000558218 CYCSP99999 105 aaKnown RBP7.23□□□□□ -1.25
USP3-207ENST00000558218 GUK1Q16774 197 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 C10orf113Q5VZT2 155 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 STX12Q86Y82 276 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 TMEM256Q8N2U0 113 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 TMEM252Q8N6L7 170 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 ZNF738Q8NE65 137 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 OR11H7Q8NGC8 314 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 OR8A1Q8NGG7 326 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 OR1L4Q8NGR5 311 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 TMEM37Q8WXS4 190 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 ANAPC16Q96DE5 110 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 MGST2Q99735 147 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 NIPSNAP3BQ9BS92 247 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 TMEM208Q9BTX3 173 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 NDUFAF3Q9BU61 184 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 ZNF331Q9NQX6 463 aaPredicted RBP7.23□□□□□ -1.25
USP3-207ENST00000558218 UQCC1Q9NVA1 299 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 CELA1Q9UNI1 258 aa7.23□□□□□ -1.25
USP3-207ENST00000558218 IGHV3OR16-12A0A075B7B8 117 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 LOC102723971A0A1B0GUV8 181 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 CRXO43186 299 aaPredicted RBP7.22□□□□□ -1.25
USP3-207ENST00000558218 CST7O76096 145 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 INSP01308 110 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 RLN2P04090 185 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 P0DMU3 169 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 FAM231AP0DMU4 169 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 FAM231CP0DMU5 169 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 LINC00310P59036 64 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 NRARPQ7Z6K4 114 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 RPP25LQ8N5L8 163 aaKnown RBP7.22□□□□□ -1.25
USP3-207ENST00000558218 ENKURQ8TC29 256 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms