RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 PKHD1P08F94 4074 aa11.48□□□□□ -0.57
CHMP1A-206ENST00000549139 DNAH6Q9C0G6 4158 aa11.48□□□□□ -0.57
CHMP1A-206ENST00000549139 ABCA13Q86UQ4 5058 aa11.47□□□□□ -0.57
CHMP1A-206ENST00000549139 H3BMM0 161 aa11.47□□□□□ -0.57
CHMP1A-206ENST00000549139 HLA-DRB4P13762 266 aa11.47□□□□□ -0.57
CHMP1A-206ENST00000549139 MORN5Q5VZ52 161 aa11.47□□□□□ -0.57
CHMP1A-206ENST00000549139 SPATA31B1PQ5VZV4 182 aa11.47□□□□□ -0.57
CHMP1A-206ENST00000549139 FOXI2Q6ZQN5 318 aa11.47□□□□□ -0.57
CHMP1A-206ENST00000549139 SAV1Q9H4B6 383 aaPredicted RBP11.47□□□□□ -0.57
CHMP1A-206ENST00000549139 RPRMQ9NS64 109 aa11.47□□□□□ -0.57
CHMP1A-206ENST00000549139 HLA-DRB4X5D2U9 266 aa11.47□□□□□ -0.57
CHMP1A-206ENST00000549139 FAT2Q9NYQ8 4349 aa11.46□□□□□ -0.57
CHMP1A-206ENST00000549139 C17orf112F2Z3M2 114 aa11.46□□□□□ -0.57
CHMP1A-206ENST00000549139 CA1P00915 261 aaPredicted RBP11.46□□□□□ -0.57
CHMP1A-206ENST00000549139 IFNA5P01569 189 aa11.46□□□□□ -0.57
CHMP1A-206ENST00000549139 Q5BKY6 102 aa11.46□□□□□ -0.57
CHMP1A-206ENST00000549139 ZNF709Q8N972 641 aa11.46□□□□□ -0.57
CHMP1A-206ENST00000549139 C20orf173Q96LM9 149 aa11.46□□□□□ -0.57
CHMP1A-206ENST00000549139 CLUHP3Q96NS8 147 aa11.46□□□□□ -0.57
CHMP1A-206ENST00000549139 PARD6GQ9BYG4 376 aaPredicted RBP11.46□□□□□ -0.57
CHMP1A-206ENST00000549139 KCNIP2Q9NS61 270 aa11.46□□□□□ -0.57
CHMP1A-206ENST00000549139 TRAV8-2A0A0B4J237 113 aa11.45□□□□□ -0.58
CHMP1A-206ENST00000549139 A0A0J9YWU9 116 aa11.45□□□□□ -0.58
CHMP1A-206ENST00000549139 GIG44P09565 113 aaPredicted RBP11.45□□□□□ -0.58
CHMP1A-206ENST00000549139 CXCL2P19875 107 aa11.45□□□□□ -0.58
CHMP1A-206ENST00000549139 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
CHMP1A-206ENST00000549139 GDF5OSQ5U4N7 250 aa11.45□□□□□ -0.58
CHMP1A-206ENST00000549139 LGALS9CQ6DKI2 356 aa11.45□□□□□ -0.58
CHMP1A-206ENST00000549139 SCGB1C1Q8TD33 95 aa11.45□□□□□ -0.58
CHMP1A-206ENST00000549139 AQP10Q96PS8 301 aa11.45□□□□□ -0.58
CHMP1A-206ENST00000549139 SMIM3Q9BZL3 60 aa11.45□□□□□ -0.58
CHMP1A-206ENST00000549139 DNAH2Q9P225 4427 aa11.45□□□□□ -0.58
CHMP1A-206ENST00000549139 TRAV5A0A0B4J249 113 aa11.44□□□□□ -0.58
CHMP1A-206ENST00000549139 DEFB1P60022 68 aa11.44□□□□□ -0.58
CHMP1A-206ENST00000549139 EBLN2Q6P2I7 272 aa11.44□□□□□ -0.58
CHMP1A-206ENST00000549139 LCN15Q6UWW0 184 aa11.44□□□□□ -0.58
CHMP1A-206ENST00000549139 LRRC20Q8TCA0 184 aa11.44□□□□□ -0.58
CHMP1A-206ENST00000549139 HRH4Q9H3N8 390 aa11.44□□□□□ -0.58
CHMP1A-206ENST00000549139 WFDC1Q9HC57 220 aa11.44□□□□□ -0.58
CHMP1A-206ENST00000549139 DNAH11Q96DT5 4516 aa11.43□□□□□ -0.58
CHMP1A-206ENST00000549139 A0A0J9YX75 114 aa11.43□□□□□ -0.58
CHMP1A-206ENST00000549139 IGLC2P0DOY2 106 aa11.43□□□□□ -0.58
CHMP1A-206ENST00000549139 FAM78BQ5VT40 261 aa11.43□□□□□ -0.58
CHMP1A-206ENST00000549139 IGFL4Q6B9Z1 124 aa11.43□□□□□ -0.58
CHMP1A-206ENST00000549139 RARRES2Q99969 163 aa11.43□□□□□ -0.58
CHMP1A-206ENST00000549139 SLC50A1Q9BRV3 221 aa11.43□□□□□ -0.58
CHMP1A-206ENST00000549139 C1QTNF4Q9BXJ3 329 aa11.43□□□□□ -0.58
CHMP1A-206ENST00000549139 KLK5Q9Y337 293 aaPredicted RBP11.43□□□□□ -0.58
CHMP1A-206ENST00000549139 C4BPBP20851 252 aa11.42□□□□□ -0.58
CHMP1A-206ENST00000549139 PSG3Q16557 428 aa11.42□□□□□ -0.58
CHMP1A-206ENST00000549139 GUK1Q16774 197 aa11.42□□□□□ -0.58
CHMP1A-206ENST00000549139 GCSAMLQ5JQS6 135 aa11.42□□□□□ -0.58
CHMP1A-206ENST00000549139 CSNK1G2-AS1Q8NCQ2 148 aa11.42□□□□□ -0.58
CHMP1A-206ENST00000549139 OR2T35Q8NGX2 323 aa11.42□□□□□ -0.58
CHMP1A-206ENST00000549139 ZNF331Q9NQX6 463 aaPredicted RBP11.42□□□□□ -0.58
CHMP1A-206ENST00000549139 TMEM14CQ9P0S9 112 aa11.42□□□□□ -0.58
CHMP1A-206ENST00000549139 DYNC1H1Q14204 4646 aaKnown RBP11.42□□□□□ -0.58
CHMP1A-206ENST00000549139 A8MTW9 85 aa11.41□□□□□ -0.58
CHMP1A-206ENST00000549139 F6UB75 175 aa11.41□□□□□ -0.58
CHMP1A-206ENST00000549139 H3BQ15 152 aa11.41□□□□□ -0.58
CHMP1A-206ENST00000549139 ZNF266Q14584 549 aa11.41□□□□□ -0.58
CHMP1A-206ENST00000549139 RNF182Q8N6D2 247 aa11.41□□□□□ -0.58
CHMP1A-206ENST00000549139 INO80EQ8NBZ0 244 aaPredicted RBP11.41□□□□□ -0.58
CHMP1A-206ENST00000549139 OR4B1Q8NGF8 309 aa11.41□□□□□ -0.58
CHMP1A-206ENST00000549139 OR11H2Q8NH07 326 aa11.41□□□□□ -0.58
CHMP1A-206ENST00000549139 SAT2Q96F10 170 aaPredicted RBP11.41□□□□□ -0.58
CHMP1A-206ENST00000549139 MRPL32Q9BYC8 188 aaKnown RBP11.41□□□□□ -0.58
CHMP1A-206ENST00000549139 CLEC5AQ9NY25 188 aa11.41□□□□□ -0.58
CHMP1A-206ENST00000549139 DNAH17Q9UFH2 4485 aa11.41□□□□□ -0.58
CHMP1A-206ENST00000549139 ZNF253O75346 499 aa11.4□□□□□ -0.58
CHMP1A-206ENST00000549139 DUSP14O95147 198 aaKnown RBP11.4□□□□□ -0.58
CHMP1A-206ENST00000549139 HIST1H1EP10412 219 aaKnown RBP11.4□□□□□ -0.58
CHMP1A-206ENST00000549139 HLA-DMBP28068 263 aa11.4□□□□□ -0.58
CHMP1A-206ENST00000549139 PSG9Q00887 426 aa11.4□□□□□ -0.58
CHMP1A-206ENST00000549139 ZNF738Q8NE65 137 aa11.4□□□□□ -0.58
CHMP1A-206ENST00000549139 ZNF586Q9NXT0 402 aa11.4□□□□□ -0.58
CHMP1A-206ENST00000549139 TNFSF18Q9UNG2 199 aa11.4□□□□□ -0.58
CHMP1A-206ENST00000549139 TIMM9Q9Y5J7 89 aa11.4□□□□□ -0.58
CHMP1A-206ENST00000549139 FXYD6-FXYD2A0A087WZ82 144 aa11.39□□□□□ -0.59
CHMP1A-206ENST00000549139 G3V3Q6 166 aa11.39□□□□□ -0.59
CHMP1A-206ENST00000549139 IGKV3-20P01619 116 aa11.39□□□□□ -0.59
CHMP1A-206ENST00000549139 SNRPCP09234 159 aaKnown RBP11.39□□□□□ -0.59
CHMP1A-206ENST00000549139 FFAR4Q5NUL3 377 aa11.39□□□□□ -0.59
CHMP1A-206ENST00000549139 MIR17HGQ75NE6 70 aa11.39□□□□□ -0.59
CHMP1A-206ENST00000549139 FAM167A-AS1Q96KT0 104 aa11.39□□□□□ -0.59
CHMP1A-206ENST00000549139 SLC25A2Q9BXI2 301 aa11.39□□□□□ -0.59
CHMP1A-206ENST00000549139 XCL2Q9UBD3 114 aa11.39□□□□□ -0.59
CHMP1A-206ENST00000549139 FUT9Q9Y231 359 aa11.39□□□□□ -0.59
CHMP1A-206ENST00000549139 RNF222A6NCQ9 220 aa11.38□□□□□ -0.59
CHMP1A-206ENST00000549139 ZNF705EA8MWA4 302 aaPredicted RBP11.38□□□□□ -0.59
CHMP1A-206ENST00000549139 TRBV19A0A075B6N1 114 aa11.37□□□□□ -0.59
CHMP1A-206ENST00000549139 H3BTX0 84 aa11.37□□□□□ -0.59
CHMP1A-206ENST00000549139 SLC17A3O00476 420 aa11.37□□□□□ -0.59
CHMP1A-206ENST00000549139 PYYP10082 97 aa11.37□□□□□ -0.59
CHMP1A-206ENST00000549139 CNN1P51911 297 aaKnown RBP11.37□□□□□ -0.59
CHMP1A-206ENST00000549139 RHOBP62745 196 aa11.37□□□□□ -0.59
CHMP1A-206ENST00000549139 PDE6HQ13956 83 aa11.37□□□□□ -0.59
CHMP1A-206ENST00000549139 ACOT6Q3I5F7 207 aaPredicted RBP11.37□□□□□ -0.59
CHMP1A-206ENST00000549139 AMTNQ6UX39 209 aa11.37□□□□□ -0.59
CHMP1A-206ENST00000549139 OR8A1Q8NGG7 326 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms