RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 ALKBH7Q9BT30 221 aaPredicted RBP14.46□□□□□ -0.09
PRPF40B-208ENST00000548436 NRN1Q9NPD7 142 aa14.46□□□□□ -0.09
PRPF40B-208ENST00000548436 PSG8Q9UQ74 426 aa14.46□□□□□ -0.09
PRPF40B-208ENST00000548436 PSG3Q16557 428 aa14.46□□□□□ -0.09
PRPF40B-208ENST00000548436 TDRG1Q3Y452 100 aa14.46□□□□□ -0.09
PRPF40B-208ENST00000548436 RBPMS2Q6ZRY4 209 aaKnown RBP14.46□□□□□ -0.09
PRPF40B-208ENST00000548436 S100A7AQ86SG5 101 aa14.46□□□□□ -0.09
PRPF40B-208ENST00000548436 TMEM190Q8WZ59 177 aa14.46□□□□□ -0.09
PRPF40B-208ENST00000548436 NDUFAF3Q9BU61 184 aa14.46□□□□□ -0.09
PRPF40B-208ENST00000548436 TMUB1Q9BVT8 246 aa14.46□□□□□ -0.09
PRPF40B-208ENST00000548436 NPFFO15130 113 aa14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 ATP6V0E1O15342 81 aa14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 PDE6HQ13956 83 aa14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 ECSCRQ19T08 205 aa14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 UNQ5815/PRO19632Q6UWF5 114 aa14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 FAM19A2Q8N3H0 131 aa14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 ZFP30Q9Y2G7 519 aa14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 KIR2DL5BA0A0G2JN68 375 aa14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 KIR2DL5BA0A0G2JPC4 375 aa14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 CENPVL3A0A0U1RRI6 287 aa14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 KLF5Q13887 457 aaPredicted RBP14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 TEX43Q6ZNM6 134 aa14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 KIR2DL5AQ8N109 375 aa14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 FAM110DQ8TAY7 271 aaPredicted RBP14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 VN1R17PQ8TDU5 208 aa14.45□□□□□ -0.1
PRPF40B-208ENST00000548436 FAM231BA6NCW3 169 aa14.44□□□□□ -0.1
PRPF40B-208ENST00000548436 SH2D7A6NKC9 451 aaPredicted RBP14.44□□□□□ -0.1
PRPF40B-208ENST00000548436 LINC01548A6NM66 108 aa14.44□□□□□ -0.1
PRPF40B-208ENST00000548436 K7EQM0 130 aa14.44□□□□□ -0.1
PRPF40B-208ENST00000548436 NIT1Q86X76 327 aa14.44□□□□□ -0.1
PRPF40B-208ENST00000548436 OR4B1Q8NGF8 309 aa14.44□□□□□ -0.1
PRPF40B-208ENST00000548436 TXN2Q99757 166 aa14.44□□□□□ -0.1
PRPF40B-208ENST00000548436 SOX21Q9Y651 276 aaPredicted RBP14.44□□□□□ -0.1
PRPF40B-208ENST00000548436 IGHV3-35A0A0C4DH35 117 aa14.43□□□□□ -0.1
PRPF40B-208ENST00000548436 CRIP1P50238 77 aa14.43□□□□□ -0.1
PRPF40B-208ENST00000548436 KRTDAPP60985 99 aa14.43□□□□□ -0.1
PRPF40B-208ENST00000548436 LURAP1LQ8IV03 231 aa14.43□□□□□ -0.1
PRPF40B-208ENST00000548436 Q8N976 141 aa14.43□□□□□ -0.1
PRPF40B-208ENST00000548436 IGHV3OR16-8A0A075B7F1 116 aa14.43□□□□□ -0.1
PRPF40B-208ENST00000548436 C15orf32Q32M92 178 aa14.43□□□□□ -0.1
PRPF40B-208ENST00000548436 AAMDCQ9H7C9 122 aa14.43□□□□□ -0.1
PRPF40B-208ENST00000548436 APOHP02749 345 aaPredicted RBP14.42□□□□□ -0.1
PRPF40B-208ENST00000548436 ZNF502Q8TBZ5 544 aa14.42□□□□□ -0.1
PRPF40B-208ENST00000548436 RABAC1Q9UI14 185 aa14.42□□□□□ -0.1
PRPF40B-208ENST00000548436 SMAD5-AS1Q9Y6J3 95 aa14.42□□□□□ -0.1
PRPF40B-208ENST00000548436 G3V318 75 aa14.42□□□□□ -0.1
PRPF40B-208ENST00000548436 GPR183P32249 361 aa14.42□□□□□ -0.1
PRPF40B-208ENST00000548436 SPTAN1Q13813 2472 aaKnown RBP14.42□□□□□ -0.1
PRPF40B-208ENST00000548436 KLK9Q2XQG4 91 aa14.42□□□□□ -0.1
PRPF40B-208ENST00000548436 C8orf49Q96NF6 230 aa14.42□□□□□ -0.1
PRPF40B-208ENST00000548436 KLK9Q9UKQ9 250 aa14.42□□□□□ -0.1
PRPF40B-208ENST00000548436 RPL7P18124 248 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-208ENST00000548436 NTF3P20783 257 aa14.41□□□□□ -0.1
PRPF40B-208ENST00000548436 FOXA3P55318 350 aaPredicted RBP14.41□□□□□ -0.1
PRPF40B-208ENST00000548436 RHOGP84095 191 aa14.41□□□□□ -0.1
PRPF40B-208ENST00000548436 CELSR1Q9NYQ6 3014 aa14.41□□□□□ -0.1
PRPF40B-208ENST00000548436 IGHV3OR16-10A0A075B7F0 116 aa14.4□□□□□ -0.1
PRPF40B-208ENST00000548436 SCGB2A1O75556 95 aa14.4□□□□□ -0.1
PRPF40B-208ENST00000548436 PSG9Q00887 426 aa14.4□□□□□ -0.1
PRPF40B-208ENST00000548436 PAX8Q06710 450 aa14.4□□□□□ -0.1
PRPF40B-208ENST00000548436 COL12A1Q99715 3063 aa14.39□□□□□ -0.11
PRPF40B-208ENST00000548436 HAX1O00165 279 aa14.39□□□□□ -0.11
PRPF40B-208ENST00000548436 CLEC3BP05452 202 aa14.39□□□□□ -0.11
PRPF40B-208ENST00000548436 C5orf56Q8N8D9 126 aa14.39□□□□□ -0.11
PRPF40B-208ENST00000548436 URB1-AS1Q96HZ7 61 aa14.39□□□□□ -0.11
PRPF40B-208ENST00000548436 CFAP46Q8IYW2 2715 aa14.39□□□□□ -0.11
PRPF40B-208ENST00000548436 IGKV2-40A0A087WW87 121 aaPredicted RBP14.38□□□□□ -0.11
PRPF40B-208ENST00000548436 IGHV4-61A0A0C4DH41 118 aa14.38□□□□□ -0.11
PRPF40B-208ENST00000548436 IGKV2D-40P01614 121 aaPredicted RBP14.38□□□□□ -0.11
PRPF40B-208ENST00000548436 C3orf79P0CE67 100 aa14.38□□□□□ -0.11
PRPF40B-208ENST00000548436 CSN1S1P47710 185 aa14.38□□□□□ -0.11
PRPF40B-208ENST00000548436 TMEM219Q86XT9 240 aa14.38□□□□□ -0.11
PRPF40B-208ENST00000548436 ZFAND3Q9H8U3 227 aa14.38□□□□□ -0.11
PRPF40B-208ENST00000548436 PAM16Q9Y3D7 125 aa14.38□□□□□ -0.11
PRPF40B-208ENST00000548436 IGSF10Q6WRI0 2623 aa14.38□□□□□ -0.11
PRPF40B-208ENST00000548436 HSBP1O75506 76 aa14.38□□□□□ -0.11
PRPF40B-208ENST00000548436 IGFL4Q6B9Z1 124 aa14.38□□□□□ -0.11
PRPF40B-208ENST00000548436 RNASEKQ6P5S7 137 aaKnown RBP14.38□□□□□ -0.11
PRPF40B-208ENST00000548436 CCDC140Q96MF4 163 aa14.38□□□□□ -0.11
PRPF40B-208ENST00000548436 IGHG4P01861 327 aa14.37□□□□□ -0.11
PRPF40B-208ENST00000548436 VAMP8Q9BV40 100 aa14.37□□□□□ -0.11
PRPF40B-208ENST00000548436 CHEK1O14757 476 aa14.37□□□□□ -0.11
PRPF40B-208ENST00000548436 ARMS2P0C7Q2 107 aa14.37□□□□□ -0.11
PRPF40B-208ENST00000548436 HLA-DMBP28068 263 aa14.37□□□□□ -0.11
PRPF40B-208ENST00000548436 CLEC19AQ6UXS0 136 aa14.37□□□□□ -0.11
PRPF40B-208ENST00000548436 CCL19Q99731 98 aa14.37□□□□□ -0.11
PRPF40B-208ENST00000548436 C20orf144Q9BQM9 153 aa14.37□□□□□ -0.11
PRPF40B-208ENST00000548436 LOC102724200A0A096LPH7 203 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-208ENST00000548436 SERTM2A0A1B0GWG4 89 aa14.36□□□□□ -0.11
PRPF40B-208ENST00000548436 BRD3OSQ6XYD6 125 aa14.36□□□□□ -0.11
PRPF40B-208ENST00000548436 PIFOQ8TCI5 191 aa14.36□□□□□ -0.11
PRPF40B-208ENST00000548436 PIMREGQ9BSJ6 248 aa14.36□□□□□ -0.11
PRPF40B-208ENST00000548436 ZFYVE26Q68DK2 2539 aa14.36□□□□□ -0.11
PRPF40B-208ENST00000548436 IGHV1-69DA0A0B4J2H0 117 aa14.35□□□□□ -0.11
PRPF40B-208ENST00000548436 A0A1B0GUT8 65 aa14.35□□□□□ -0.11
PRPF40B-208ENST00000548436 M0QZ24 198 aa14.35□□□□□ -0.11
PRPF40B-208ENST00000548436 IGHV1-69P01742 117 aa14.35□□□□□ -0.11
PRPF40B-208ENST00000548436 BORCS7Q96B45 105 aa14.35□□□□□ -0.11
PRPF40B-208ENST00000548436 A0A1B0GV90 55 aa14.35□□□□□ -0.11
PRPF40B-208ENST00000548436 M0R2Z0 102 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms