RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 LINC00869P0C866 280 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 ORM2P19652 201 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 GATA2P23769 480 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-223ENST00000545440 PLP1P60201 277 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 ASAH1Q13510 395 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 TMEM182Q6ZP80 229 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-223ENST00000545440 CYP2G1PQ6ZSU1 146 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 S100A7AQ86SG5 101 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 OR10P1Q8NGE3 313 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 OR1B1Q8NGR6 318 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 SHANK2-AS3Q9BTD1 123 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 GGACTQ9BVM4 153 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 SLC25A22Q9H936 323 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 GSKIPQ9P0R6 139 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 FAM240BA0A1B0GVZ2 78 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 C7orf66A4D0T2 115 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 GAGE10A6NGK3 116 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 C11orf94C9JXX5 98 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 RHODO00212 210 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 CCSO14618 274 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 DEFB4AO15263 64 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 CCNKO75909 580 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 RPL7P18124 248 aaKnown RBP5.54□□□□□ -1.52
SNHG1-223ENST00000545440 TCTAP57738 103 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 NANOS2P60321 138 aaKnown RBP5.54□□□□□ -1.52
SNHG1-223ENST00000545440 RRAS2P62070 204 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-223ENST00000545440 PXDC1Q5TGL8 231 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 GDF5OSQ5U4N7 250 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 MZT2BQ6NZ67 158 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 ZNF705AQ6ZN79 300 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-223ENST00000545440 ZNF546Q86UE3 836 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 ZNF709Q8N972 641 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 LINC00052Q96N35 136 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 SEC22CQ9BRL7 303 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 SCRT1Q9BWW7 348 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 SLC25A39Q9BZJ4 359 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-223ENST00000545440 NPVFQ9HCQ7 196 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 RPRMQ9NS64 109 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 CLEC5AQ9NY25 188 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 PTTG2Q9NZH5 202 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 XCL2Q9UBD3 114 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 RNF24Q9Y225 148 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 HIGD1AQ9Y241 93 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 PLECQ15149 4684 aaKnown RBP5.54□□□□□ -1.52
SNHG1-223ENST00000545440 HYDINQ4G0P3 5121 aa5.54□□□□□ -1.52
SNHG1-223ENST00000545440 A0A087X0K7 114 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 A0A0J9YX75 114 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 C5orf51A6NDU8 294 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 A8MTW9 85 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 ZNF705FA8MVS1 300 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-223ENST00000545440 FAM25EA8MYX2 175 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 L7N2F9 121 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 HYPMO75409 117 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 DEDDO75618 318 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 UPK1BO75841 260 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 ZNF705DP0CH99 300 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-223ENST00000545440 ZNF705BP0CI00 300 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-223ENST00000545440 RBMY1A1P0DJD3 496 aaKnown RBP5.53□□□□□ -1.52
SNHG1-223ENST00000545440 RBMY1CP0DJD4 496 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 PVALBP20472 110 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-223ENST00000545440 SLC38A11Q08AI6 406 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 RBMY1FQ15415 496 aaKnown RBP5.53□□□□□ -1.52
SNHG1-223ENST00000545440 EBLN2Q6P2I7 272 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 C12orf45Q8N5I9 185 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-223ENST00000545440 C2CD4CQ8TF44 421 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 C2orf50Q96LR7 162 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 C17orf77Q96MU5 243 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 RSG1Q9BU20 258 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 C11orf1Q9H5F2 150 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 DOK5Q9P104 306 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 C11orf21Q9P2W6 132 aa5.53□□□□□ -1.52
SNHG1-223ENST00000545440 LSM5Q9Y4Y9 91 aaKnown RBP5.53□□□□□ -1.52
SNHG1-223ENST00000545440 SMIM9A6NGZ8 99 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 GOSR2O14653 212 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 AGPAT2O15120 278 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 LY6G6CO95867 125 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 OR5G3P0C626 314 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 CXCL2P19875 107 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 HLA-DMBP28068 263 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 CAV2P51636 162 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 DEFB1P60022 68 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 PSG9Q00887 426 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 ARL16Q0P5N6 197 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 VWC2Q2TAL6 325 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 FAM78BQ5VT40 261 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 LGALS9CQ6DKI2 356 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 GSG1LQ6UXU4 331 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 OR4B1Q8NGF8 309 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 ENKURQ8TC29 256 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 UHRF2Q96PU4 802 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 MGST2Q99735 147 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 ARL6Q9H0F7 186 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 ARV1Q9H2C2 271 aa5.52□□□□□ -1.53
SNHG1-223ENST00000545440 LYRM2Q9NU23 88 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-223ENST00000545440 NACAE9PAV3 2078 aa5.51□□□□□ -1.53
SNHG1-223ENST00000545440 TRAV8-2A0A0B4J237 113 aa5.51□□□□□ -1.53
SNHG1-223ENST00000545440 TRAV10A0A0B4J240 114 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms