RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 MRAPQ8TCY5 172 aa8.75□□□□□ -1.01
SNHG1-221ENST00000544983 PAXXQ9BUH6 204 aa8.75□□□□□ -1.01
SNHG1-221ENST00000544983 SLC25A2Q9BXI2 301 aa8.75□□□□□ -1.01
SNHG1-221ENST00000544983 MAP6D1Q9H9H5 199 aa8.75□□□□□ -1.01
SNHG1-221ENST00000544983 RPRMQ9NS64 109 aa8.75□□□□□ -1.01
SNHG1-221ENST00000544983 TRBV19A0A075B6N1 114 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 TRAV5A0A0B4J249 113 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 CTXND1A0A1B0GTU2 59 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 OR7C2O60412 319 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 PRB2P02812 416 aaPredicted RBP8.74□□□□□ -1.01
SNHG1-221ENST00000544983 NBEAP1P0C6P0 100 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 ZNF688P0C7X2 276 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 IGHV4-30-4P0DP06 118 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 PSG9Q00887 426 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 DEFB121Q5J5C9 76 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 FAM122CQ6P4D5 195 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 LYPD1Q8N2G4 141 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 RNF141Q8WVD5 230 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 RAB24Q969Q5 203 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 PHYHIPLQ96FC7 376 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 ZNF331Q9NQX6 463 aaPredicted RBP8.74□□□□□ -1.01
SNHG1-221ENST00000544983 RFNGQ9Y644 331 aa8.74□□□□□ -1.01
SNHG1-221ENST00000544983 DNAH3Q8TD57 4116 aa8.73□□□□□ -1.01
SNHG1-221ENST00000544983 H3BQ15 152 aa8.73□□□□□ -1.01
SNHG1-221ENST00000544983 CXorf1O96002 111 aa8.73□□□□□ -1.01
SNHG1-221ENST00000544983 STAG3L2P0CL84 134 aa8.73□□□□□ -1.01
SNHG1-221ENST00000544983 STAG3L3P0CL85 134 aa8.73□□□□□ -1.01
SNHG1-221ENST00000544983 DEFB131AP59861 70 aa8.73□□□□□ -1.01
SNHG1-221ENST00000544983 PSMG4Q5JS54 123 aa8.73□□□□□ -1.01
SNHG1-221ENST00000544983 SAT2Q96F10 170 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-221ENST00000544983 C17orf77Q96MU5 243 aa8.73□□□□□ -1.01
SNHG1-221ENST00000544983 AAMDCQ9H7C9 122 aa8.73□□□□□ -1.01
SNHG1-221ENST00000544983 SRD5A3Q9H8P0 318 aa8.73□□□□□ -1.01
SNHG1-221ENST00000544983 PRELID1Q9Y255 219 aa8.73□□□□□ -1.01
SNHG1-221ENST00000544983 PYYP10082 97 aa8.72□□□□□ -1.01
SNHG1-221ENST00000544983 UBE2L3P68036 154 aaKnown RBP8.72□□□□□ -1.01
SNHG1-221ENST00000544983 PSG3Q16557 428 aa8.72□□□□□ -1.01
SNHG1-221ENST00000544983 FOXI2Q6ZQN5 318 aa8.72□□□□□ -1.01
SNHG1-221ENST00000544983 FAM24BQ8N5W8 94 aa8.72□□□□□ -1.01
SNHG1-221ENST00000544983 DEFB125Q8N687 156 aa8.72□□□□□ -1.01
SNHG1-221ENST00000544983 TMED6Q8WW62 240 aa8.72□□□□□ -1.01
SNHG1-221ENST00000544983 FXYD5Q96DB9 178 aa8.72□□□□□ -1.01
SNHG1-221ENST00000544983 MRPL53Q96EL3 112 aaKnown RBP8.72□□□□□ -1.01
SNHG1-221ENST00000544983 LINC00052Q96N35 136 aa8.72□□□□□ -1.01
SNHG1-221ENST00000544983 CLUHP3Q96NS8 147 aa8.72□□□□□ -1.01
SNHG1-221ENST00000544983 TMEM167BQ9NRX6 74 aa8.72□□□□□ -1.01
SNHG1-221ENST00000544983 ZNF586Q9NXT0 402 aa8.72□□□□□ -1.01
SNHG1-221ENST00000544983 UBQLN2Q9UHD9 624 aa8.72□□□□□ -1.01
SNHG1-221ENST00000544983 LOC102724200A0A096LPH7 203 aaPredicted RBP8.71□□□□□ -1.02
SNHG1-221ENST00000544983 KIR2DL5BA0A0G2JN68 375 aa8.71□□□□□ -1.02
SNHG1-221ENST00000544983 KIR2DL5BA0A0G2JPC4 375 aa8.71□□□□□ -1.02
SNHG1-221ENST00000544983 ARL14EPLP0DKL9 152 aa8.71□□□□□ -1.02
SNHG1-221ENST00000544983 EBLN2Q6P2I7 272 aa8.71□□□□□ -1.02
SNHG1-221ENST00000544983 APRG1Q8IVJ8 170 aa8.71□□□□□ -1.02
SNHG1-221ENST00000544983 STHQ8IWL8 128 aa8.71□□□□□ -1.02
SNHG1-221ENST00000544983 KIR2DL5AQ8N109 375 aa8.71□□□□□ -1.02
SNHG1-221ENST00000544983 ARL6IP6Q8N6S5 226 aa8.71□□□□□ -1.02
SNHG1-221ENST00000544983 KIR2DL5BQ8NHK3 375 aa8.71□□□□□ -1.02
SNHG1-221ENST00000544983 SUN5Q8TC36 379 aa8.71□□□□□ -1.02
SNHG1-221ENST00000544983 ZNF503Q96F45 646 aa8.71□□□□□ -1.02
SNHG1-221ENST00000544983 TRAV8-2A0A0B4J237 113 aa8.7□□□□□ -1.02
SNHG1-221ENST00000544983 TEX46H3BTG2 121 aa8.7□□□□□ -1.02
SNHG1-221ENST00000544983 UBE2CO00762 179 aa8.7□□□□□ -1.02
SNHG1-221ENST00000544983 OR10J4P0C629 311 aa8.7□□□□□ -1.02
SNHG1-221ENST00000544983 FRMD6-AS1P0C7T7 363 aa8.7□□□□□ -1.02
SNHG1-221ENST00000544983 HLA-DRB4P13762 266 aa8.7□□□□□ -1.02
SNHG1-221ENST00000544983 SULT1A2P50226 295 aa8.7□□□□□ -1.02
SNHG1-221ENST00000544983 NKX2-5P52952 324 aaPredicted RBP8.7□□□□□ -1.02
SNHG1-221ENST00000544983 APOC4P55056 127 aa8.7□□□□□ -1.02
SNHG1-221ENST00000544983 NUTF2P61970 127 aaKnown RBP8.7□□□□□ -1.02
SNHG1-221ENST00000544983 FAM74A1Q5RGS3 127 aa8.7□□□□□ -1.02
SNHG1-221ENST00000544983 LINC00322Q6ZN03 302 aaPredicted RBP8.7□□□□□ -1.02
SNHG1-221ENST00000544983 ZNF738Q8NE65 137 aa8.7□□□□□ -1.02
SNHG1-221ENST00000544983 BLNKQ8WV28 456 aa8.7□□□□□ -1.02
SNHG1-221ENST00000544983 MBD3L1Q8WWY6 194 aa8.7□□□□□ -1.02
SNHG1-221ENST00000544983 B9D2Q9BPU9 175 aa8.7□□□□□ -1.02
SNHG1-221ENST00000544983 SAV1Q9H4B6 383 aaPredicted RBP8.7□□□□□ -1.02
SNHG1-221ENST00000544983 HLA-DRB4X5D2U9 266 aa8.7□□□□□ -1.02
SNHG1-221ENST00000544983 A0A0J9YX75 114 aa8.69□□□□□ -1.02
SNHG1-221ENST00000544983 MAP1LC3B2A6NCE7 125 aa8.69□□□□□ -1.02
SNHG1-221ENST00000544983 SLC17A3O00476 420 aa8.69□□□□□ -1.02
SNHG1-221ENST00000544983 DUSP14O95147 198 aaKnown RBP8.69□□□□□ -1.02
SNHG1-221ENST00000544983 NDUFB4O95168 129 aa8.69□□□□□ -1.02
SNHG1-221ENST00000544983 GCHFRP30047 84 aa8.69□□□□□ -1.02
SNHG1-221ENST00000544983 FAM213BQ8TBF2 198 aa8.69□□□□□ -1.02
SNHG1-221ENST00000544983 RXFP4Q8TDU9 374 aa8.69□□□□□ -1.02
SNHG1-221ENST00000544983 CITED4Q96RK1 184 aa8.69□□□□□ -1.02
SNHG1-221ENST00000544983 NKX6-2Q9C056 277 aaPredicted RBP8.69□□□□□ -1.02
SNHG1-221ENST00000544983 MAP1LC3BQ9GZQ8 125 aa8.69□□□□□ -1.02
SNHG1-221ENST00000544983 WFDC10AQ9H1F0 79 aa8.69□□□□□ -1.02
SNHG1-221ENST00000544983 TRAV1-1A0A0B4J248 108 aa8.68□□□□□ -1.02
SNHG1-221ENST00000544983 RBMY1BA6NDE4 496 aaKnown RBP8.68□□□□□ -1.02
SNHG1-221ENST00000544983 RBMY1EA6NEQ0 496 aaKnown RBP8.68□□□□□ -1.02
SNHG1-221ENST00000544983 H3BMM0 161 aa8.68□□□□□ -1.02
SNHG1-221ENST00000544983 HMGB3O15347 200 aaKnown RBP8.68□□□□□ -1.02
SNHG1-221ENST00000544983 H2AFB1P0C5Y9 115 aa8.68□□□□□ -1.02
SNHG1-221ENST00000544983 RBMY1DP0C7P1 496 aaKnown RBP8.68□□□□□ -1.02
SNHG1-221ENST00000544983 NHLRC4P0CG21 123 aaPredicted RBP8.68□□□□□ -1.02
SNHG1-221ENST00000544983 CSN1S1P47710 185 aa8.68□□□□□ -1.02
SNHG1-221ENST00000544983 PPT1P50897 306 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms