RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 RNF125Q96EQ8 232 aa10.84□□□□□ -0.67
VPS33A-208ENST00000543633 RAXQ9Y2V3 346 aa10.84□□□□□ -0.67
VPS33A-208ENST00000543633 SVILO95425 2214 aa10.84□□□□□ -0.67
VPS33A-208ENST00000543633 IGF2RP11717 2491 aa10.84□□□□□ -0.67
VPS33A-208ENST00000543633 B9A039 149 aa10.84□□□□□ -0.67
VPS33A-208ENST00000543633 CT45A10P0DMU9 189 aa10.84□□□□□ -0.67
VPS33A-208ENST00000543633 SEC11AP67812 179 aa10.84□□□□□ -0.67
VPS33A-208ENST00000543633 PLGLAQ15195 96 aa10.84□□□□□ -0.67
VPS33A-208ENST00000543633 ZNF491Q8N8L2 437 aa10.84□□□□□ -0.67
VPS33A-208ENST00000543633 E7EQL1 145 aa10.83□□□□□ -0.68
VPS33A-208ENST00000543633 APOBEC3AP31941 199 aaPredicted RBP10.83□□□□□ -0.68
VPS33A-208ENST00000543633 GPR183P32249 361 aa10.83□□□□□ -0.68
VPS33A-208ENST00000543633 ARF6P62330 175 aa10.83□□□□□ -0.68
VPS33A-208ENST00000543633 PRSS3P2Q8NHM4 247 aa10.83□□□□□ -0.68
VPS33A-208ENST00000543633 ZNF414Q96IQ9 312 aa10.83□□□□□ -0.68
VPS33A-208ENST00000543633 NPFFR1Q9GZQ6 430 aa10.83□□□□□ -0.68
VPS33A-208ENST00000543633 MUC21A0A0G2JKD1 596 aa10.82□□□□□ -0.68
VPS33A-208ENST00000543633 MUC21A0A140T8X8 626 aa10.82□□□□□ -0.68
VPS33A-208ENST00000543633 APELAP0DMC3 54 aa10.82□□□□□ -0.68
VPS33A-208ENST00000543633 LGALS9BQ3B8N2 356 aa10.82□□□□□ -0.68
VPS33A-208ENST00000543633 MUC21Q5SSG8 566 aa10.82□□□□□ -0.68
VPS33A-208ENST00000543633 LGALS9CQ6DKI2 356 aa10.82□□□□□ -0.68
VPS33A-208ENST00000543633 AAMDCQ9H7C9 122 aa10.82□□□□□ -0.68
VPS33A-208ENST00000543633 ICE1Q9Y2F5 2266 aa10.82□□□□□ -0.68
VPS33A-208ENST00000543633 MALRD1Q5VYJ5 2156 aa10.82□□□□□ -0.68
VPS33A-208ENST00000543633 PPBPP02775 128 aa10.82□□□□□ -0.68
VPS33A-208ENST00000543633 SAPCD1Q5SSQ6 148 aa10.82□□□□□ -0.68
VPS33A-208ENST00000543633 NDUFA3O95167 84 aa10.81□□□□□ -0.68
VPS33A-208ENST00000543633 CSN3P07498 182 aa10.81□□□□□ -0.68
VPS33A-208ENST00000543633 ZNF138P52744 262 aa10.81□□□□□ -0.68
VPS33A-208ENST00000543633 PSG9Q00887 426 aa10.81□□□□□ -0.68
VPS33A-208ENST00000543633 PRR31Q5SQ13 230 aa10.81□□□□□ -0.68
VPS33A-208ENST00000543633 PEF1Q9UBV8 284 aaKnown RBP10.81□□□□□ -0.68
VPS33A-208ENST00000543633 PIEZO2Q9H5I5 2752 aa10.81□□□□□ -0.68
VPS33A-208ENST00000543633 PPIAL4CA0A0B4J2A2 164 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 PLXNB1O43157 2135 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 PPIAL4GP0DN37 164 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 CRIP1P50238 77 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 UCNP55089 124 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 SRSF2Q01130 221 aaKnown RBP10.8□□□□□ -0.68
VPS33A-208ENST00000543633 PSMG4Q5JS54 123 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 FAM104BQ5XKR9 115 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 C2orf91Q6ZV80 131 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 NPBQ8NG41 125 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 IGFBPL1Q8WX77 278 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 NCOR2Q9Y618 2525 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 ARFGEF3Q5TH69 2177 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 NBR2O15453 112 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 CNIH1O95406 144 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 IL4P05112 153 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 ORMDL3Q8N138 153 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 Q8NA96 180 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 TP73-AS1Q9UF72 201 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 CACNA1AO00555 2505 aa10.8□□□□□ -0.68
VPS33A-208ENST00000543633 TMEM189A5PLL7 270 aa10.79□□□□□ -0.68
VPS33A-208ENST00000543633 NPIPB5A8MRT5 1133 aa10.79□□□□□ -0.68
VPS33A-208ENST00000543633 SIVA1O15304 175 aa10.79□□□□□ -0.68
VPS33A-208ENST00000543633 Q71RC1 249 aaPredicted RBP10.79□□□□□ -0.68
VPS33A-208ENST00000543633 LY6G5BQ8NDX9 201 aa10.79□□□□□ -0.68
VPS33A-208ENST00000543633 C17orf77Q96MU5 243 aa10.79□□□□□ -0.68
VPS33A-208ENST00000543633 DSPP15924 2871 aaKnown RBP10.79□□□□□ -0.68
VPS33A-208ENST00000543633 A0A096LNJ9 63 aa10.79□□□□□ -0.68
VPS33A-208ENST00000543633 CD3EP07766 207 aa10.79□□□□□ -0.68
VPS33A-208ENST00000543633 S100A7P31151 101 aa10.79□□□□□ -0.68
VPS33A-208ENST00000543633 MFAP4P55083 255 aa10.79□□□□□ -0.68
VPS33A-208ENST00000543633 OR9G4Q8NGQ1 327 aa10.79□□□□□ -0.68
VPS33A-208ENST00000543633 PRELID3AQ96N28 172 aa10.79□□□□□ -0.68
VPS33A-208ENST00000543633 SIGLEC8Q9NYZ4 499 aa10.79□□□□□ -0.68
VPS33A-208ENST00000543633 OR2T8A6NH00 312 aa10.78□□□□□ -0.68
VPS33A-208ENST00000543633 TIMM23O14925 209 aa10.78□□□□□ -0.68
VPS33A-208ENST00000543633 SCGB2A1O75556 95 aa10.78□□□□□ -0.68
VPS33A-208ENST00000543633 FGF6P10767 208 aa10.78□□□□□ -0.68
VPS33A-208ENST00000543633 COX7A1P24310 79 aa10.78□□□□□ -0.68
VPS33A-208ENST00000543633 CEACAM3P40198 252 aa10.78□□□□□ -0.68
VPS33A-208ENST00000543633 ANKRD39Q53RE8 183 aa10.78□□□□□ -0.68
VPS33A-208ENST00000543633 GFRALQ6UXV0 394 aa10.78□□□□□ -0.68
VPS33A-208ENST00000543633 OR11H6Q8NGC7 330 aa10.78□□□□□ -0.68
VPS33A-208ENST00000543633 A0A087X0K7 114 aa10.77□□□□□ -0.68
VPS33A-208ENST00000543633 D6R8Y8 96 aa10.77□□□□□ -0.68
VPS33A-208ENST00000543633 GNG7O60262 68 aa10.77□□□□□ -0.68
VPS33A-208ENST00000543633 SH2D1AO60880 128 aa10.77□□□□□ -0.68
VPS33A-208ENST00000543633 HBDP02042 147 aa10.77□□□□□ -0.68
VPS33A-208ENST00000543633 IFI27P40305 119 aaPredicted RBP10.77□□□□□ -0.68
VPS33A-208ENST00000543633 TMEM97Q5BJF2 176 aa10.77□□□□□ -0.68
VPS33A-208ENST00000543633 LYZL1Q6UWQ5 148 aa10.77□□□□□ -0.68
VPS33A-208ENST00000543633 CFHR4Q92496 578 aa10.77□□□□□ -0.68
VPS33A-208ENST00000543633 NBEAQ8NFP9 2946 aa10.77□□□□□ -0.69
VPS33A-208ENST00000543633 CHD8Q9HCK8 2581 aa10.77□□□□□ -0.69
VPS33A-208ENST00000543633 IGLV11-55A0A075B6I3 123 aa10.77□□□□□ -0.69
VPS33A-208ENST00000543633 A6NDN8 102 aa10.77□□□□□ -0.69
VPS33A-208ENST00000543633 H0Y8G0 127 aa10.77□□□□□ -0.69
VPS33A-208ENST00000543633 RPL7P18124 248 aaKnown RBP10.77□□□□□ -0.69
VPS33A-208ENST00000543633 FCGR2BP31994 310 aaPredicted RBP10.77□□□□□ -0.69
VPS33A-208ENST00000543633 BMI1P35226 326 aa10.77□□□□□ -0.69
VPS33A-208ENST00000543633 PAX8Q06710 450 aa10.77□□□□□ -0.69
VPS33A-208ENST00000543633 BOD1L2Q8IYS8 172 aa10.77□□□□□ -0.69
VPS33A-208ENST00000543633 CST9LQ9H4G1 147 aa10.77□□□□□ -0.69
VPS33A-208ENST00000543633 DPM3Q9P2X0 92 aa10.77□□□□□ -0.69
VPS33A-208ENST00000543633 NCR2O95944 276 aa10.76□□□□□ -0.69
VPS33A-208ENST00000543633 LINC01559Q495D7 138 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms