RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 PROCRQ9UNN8 238 aa9.1□□□□□ -0.95
CDH4-201ENST00000543233 LOC107984156A0A0G2JMH3 177 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 TCRBV4S1A1TA0A5B7 111 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 NPIPB6E9PJ23 425 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 SPRY3O43610 288 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 RPL30P62888 115 aaKnown RBP9.09□□□□□ -0.95
CDH4-201ENST00000543233 Q6ZS49 121 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 H2BFWTQ7Z2G1 175 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 ARL17AQ8IVW1 177 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 OR1L8Q8NGR8 309 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 ZZEF1O43149 2961 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 PRRG2O14669 202 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 FCN3O75636 299 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 PSMB2P49721 201 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 TREML4Q6UXN2 200 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 C1orf162Q8NEQ5 155 aaPredicted RBP9.09□□□□□ -0.95
CDH4-201ENST00000543233 OR13A1Q8NGR1 328 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 LEAP2Q969E1 77 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 TPPP3Q9BW30 176 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 TMEM30CPA0ZSE6 113 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 IGLV2-8P01709 118 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 ERVK11-1P61568 191 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 PIP4P1Q86T03 277 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 Q8N7P7 452 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 AJUBAQ96IF1 538 aa9.09□□□□□ -0.95
CDH4-201ENST00000543233 AGRNO00468 2067 aa9.09□□□□□ -0.96
CDH4-201ENST00000543233 LOC107984640A0A0U1RRK4 108 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 IQCF6A8MYZ5 107 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 MSMPQ1L6U9 139 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 LINC00596Q86U02 117 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 C11orf53Q8IXP5 236 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 ZNRF1Q8ND25 227 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 COQ2Q96H96 371 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 PRO0461Q9UI25 63 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 TNCP24821 2201 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 IGHV1-18A0A0C4DH31 117 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 SMIM9A6NGZ8 99 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 C17orf98A8MV24 154 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 GGTLC3B5MD39 225 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 AREGP15514 252 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 MOGAT3Q86VF5 341 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 Q8IYB0 196 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 ZNF414Q96IQ9 312 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 GNG12Q9UBI6 72 aa9.08□□□□□ -0.96
CDH4-201ENST00000543233 MGST3O14880 152 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 IGHG3P01860 377 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 DKK4Q9UBT3 224 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 PTPRQQ9UMZ3 2332 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 TACC2O95359 2948 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 TMEM8BA6NDV4 472 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 C15orf62A8K5M9 175 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 VKORC1L1Q8N0U8 176 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 PPDPFLQ8WWR9 84 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 TMEM167BQ9NRX6 74 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 IGKV3-15P01624 115 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 C12orf74Q32Q52 190 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 CEND1Q8N111 149 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 PHLDA1Q8WV24 401 aaPredicted RBP9.07□□□□□ -0.96
CDH4-201ENST00000543233 NRGNQ92686 78 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 CXXC4Q9H2H0 198 aa9.07□□□□□ -0.96
CDH4-201ENST00000543233 TRAV4A0A0B4J268 109 aa9.06□□□□□ -0.96
CDH4-201ENST00000543233 C16orf97H3BN30 126 aa9.06□□□□□ -0.96
CDH4-201ENST00000543233 RHODO00212 210 aa9.06□□□□□ -0.96
CDH4-201ENST00000543233 MPDU1O75352 247 aa9.06□□□□□ -0.96
CDH4-201ENST00000543233 MFAP4P55083 255 aa9.06□□□□□ -0.96
CDH4-201ENST00000543233 SEM1Q6ZVN7 128 aa9.06□□□□□ -0.96
CDH4-201ENST00000543233 FBXL15Q9H469 300 aa9.06□□□□□ -0.96
CDH4-201ENST00000543233 TRAV8-2A0A0B4J237 113 aa9.06□□□□□ -0.96
CDH4-201ENST00000543233 CENPVL3A0A0U1RRI6 287 aa9.06□□□□□ -0.96
CDH4-201ENST00000543233 ZNF688P0C7X2 276 aa9.06□□□□□ -0.96
CDH4-201ENST00000543233 ZCCHC24Q8N2G6 241 aaKnown RBP9.06□□□□□ -0.96
CDH4-201ENST00000543233 HIST1H4GQ99525 98 aa9.06□□□□□ -0.96
CDH4-201ENST00000543233 TM4SF5O14894 197 aa9.05□□□□□ -0.96
CDH4-201ENST00000543233 FAM27E3Q08E93 113 aa9.05□□□□□ -0.96
CDH4-201ENST00000543233 UTF1Q5T230 341 aa9.05□□□□□ -0.96
CDH4-201ENST00000543233 DUX4L9Q6RFH8 374 aaPredicted RBP9.05□□□□□ -0.96
CDH4-201ENST00000543233 CD177Q8N6Q3 437 aa9.05□□□□□ -0.96
CDH4-201ENST00000543233 ZNF71Q9NQZ8 489 aaPredicted RBP9.05□□□□□ -0.96
CDH4-201ENST00000543233 SVEP1Q4LDE5 3571 aa9.05□□□□□ -0.96
CDH4-201ENST00000543233 TRBV6-6A0A0A6YYG2 114 aa9.05□□□□□ -0.96
CDH4-201ENST00000543233 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.05□□□□□ -0.96
CDH4-201ENST00000543233 PRDX2P32119 198 aa9.05□□□□□ -0.96
CDH4-201ENST00000543233 C22orf34Q6ZV56 151 aa9.05□□□□□ -0.96
CDH4-201ENST00000543233 ATP5L2Q7Z4Y8 100 aa9.05□□□□□ -0.96
CDH4-201ENST00000543233 PPP1R27Q86WC6 154 aa9.05□□□□□ -0.96
CDH4-201ENST00000543233 TCF19Q9Y242 345 aa9.05□□□□□ -0.96
CDH4-201ENST00000543233 LINC00473A8K010 186 aa9.05□□□□□ -0.96
CDH4-201ENST00000543233 SRSF1Q07955 248 aaKnown RBP eCLIP9.05□□□□□ -0.96
CDH4-201ENST00000543233 RRN3P1Q2M238 152 aa9.05□□□□□ -0.96
CDH4-201ENST00000543233 ZNF474Q6S9Z5 364 aaPredicted RBP9.05□□□□□ -0.96
CDH4-201ENST00000543233 RBMXL3Q8N7X1 1067 aaKnown RBP9.05□□□□□ -0.96
CDH4-201ENST00000543233 IGF2BP2-AS1Q96M15 143 aa9.05□□□□□ -0.96
CDH4-201ENST00000543233 LINC01548A6NM66 108 aa9.04□□□□□ -0.96
CDH4-201ENST00000543233 FCGR3BO75015 233 aa9.04□□□□□ -0.96
CDH4-201ENST00000543233 FAM106CPP0CH98 169 aa9.04□□□□□ -0.96
CDH4-201ENST00000543233 LINC00694P0DN24 101 aa9.04□□□□□ -0.96
CDH4-201ENST00000543233 RPL7P18124 248 aaKnown RBP9.04□□□□□ -0.96
CDH4-201ENST00000543233 FAM106AQ4KMX7 169 aa9.04□□□□□ -0.96
CDH4-201ENST00000543233 DLX4Q92988 240 aaPredicted RBP9.04□□□□□ -0.96
CDH4-201ENST00000543233 DKK2Q9UBU2 259 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms