RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 SFT2D1Q8WV19 159 aa17.32■□□□□ 0.36
HOMER3-205ENST00000542541 MBD3L1Q8WWY6 194 aa17.32■□□□□ 0.36
HOMER3-205ENST00000542541 ZNF503Q96F45 646 aa17.32■□□□□ 0.36
HOMER3-205ENST00000542541 H3BQ15 152 aa17.32■□□□□ 0.36
HOMER3-205ENST00000542541 K7EQG2 157 aa17.32■□□□□ 0.36
HOMER3-205ENST00000542541 ID1P41134 155 aa17.32■□□□□ 0.36
HOMER3-205ENST00000542541 BEAN1Q3B7T3 259 aa17.32■□□□□ 0.36
HOMER3-205ENST00000542541 FXYD5Q96DB9 178 aa17.32■□□□□ 0.36
HOMER3-205ENST00000542541 ZNF705EA8MWA4 302 aaPredicted RBP17.31■□□□□ 0.36
HOMER3-205ENST00000542541 TEX46H3BTG2 121 aa17.31■□□□□ 0.36
HOMER3-205ENST00000542541 CMC4P56277 68 aaPredicted RBP17.31■□□□□ 0.36
HOMER3-205ENST00000542541 PDE6HQ13956 83 aa17.31■□□□□ 0.36
HOMER3-205ENST00000542541 ZNF680Q8NEM1 530 aa17.31■□□□□ 0.36
HOMER3-205ENST00000542541 C16orf92Q96LL3 132 aa17.31■□□□□ 0.36
HOMER3-205ENST00000542541 SLC50A1Q9BRV3 221 aa17.31■□□□□ 0.36
HOMER3-205ENST00000542541 TMEM167BQ9NRX6 74 aa17.31■□□□□ 0.36
HOMER3-205ENST00000542541 ZNF586Q9NXT0 402 aa17.31■□□□□ 0.36
HOMER3-205ENST00000542541 MGAM2Q2M2H8 2515 aa17.31■□□□□ 0.36
HOMER3-205ENST00000542541 TRBV19A0A075B6N1 114 aa17.3■□□□□ 0.36
HOMER3-205ENST00000542541 ISLRO14498 428 aa17.3■□□□□ 0.36
HOMER3-205ENST00000542541 SNRPCP09234 159 aaKnown RBP17.3■□□□□ 0.36
HOMER3-205ENST00000542541 GCHFRP30047 84 aa17.3■□□□□ 0.36
HOMER3-205ENST00000542541 SNRPD3P62318 126 aaKnown RBP17.3■□□□□ 0.36
HOMER3-205ENST00000542541 C17orf77Q96MU5 243 aa17.3■□□□□ 0.36
HOMER3-205ENST00000542541 ZNF253O75346 499 aa17.29■□□□□ 0.36
HOMER3-205ENST00000542541 BLOC1S1P78537 153 aa17.29■□□□□ 0.36
HOMER3-205ENST00000542541 GTSCR1Q86UQ5 136 aa17.29■□□□□ 0.36
HOMER3-205ENST00000542541 IQCF2Q8IXL9 164 aa17.29■□□□□ 0.36
HOMER3-205ENST00000542541 BLNKQ8WV28 456 aa17.29■□□□□ 0.36
HOMER3-205ENST00000542541 PSMB3P49720 205 aa17.29■□□□□ 0.36
HOMER3-205ENST00000542541 FGF8P55075 233 aaPredicted RBP17.29■□□□□ 0.36
HOMER3-205ENST00000542541 SAT2Q96F10 170 aaPredicted RBP17.29■□□□□ 0.36
HOMER3-205ENST00000542541 CLEC5AQ9NY25 188 aa17.29■□□□□ 0.36
HOMER3-205ENST00000542541 TRAV1-1A0A0B4J248 108 aa17.28■□□□□ 0.36
HOMER3-205ENST00000542541 H3BTX0 84 aa17.28■□□□□ 0.36
HOMER3-205ENST00000542541 SOCS3O14543 225 aa17.28■□□□□ 0.36
HOMER3-205ENST00000542541 HBE1P02100 147 aa17.28■□□□□ 0.36
HOMER3-205ENST00000542541 PSG9Q00887 426 aa17.28■□□□□ 0.36
HOMER3-205ENST00000542541 UBQLN2Q9UHD9 624 aa17.28■□□□□ 0.36
HOMER3-205ENST00000542541 ZNF331Q9NQX6 463 aaPredicted RBP17.27■□□□□ 0.36
HOMER3-205ENST00000542541 KRTAP10-11P60412 298 aa17.26■□□□□ 0.35
HOMER3-205ENST00000542541 KPRPQ5T749 579 aaPredicted RBP17.26■□□□□ 0.35
HOMER3-205ENST00000542541 LYPD1Q8N2G4 141 aa17.26■□□□□ 0.35
HOMER3-205ENST00000542541 SUN5Q8TC36 379 aa17.26■□□□□ 0.35
HOMER3-205ENST00000542541 FAM110AQ9BQ89 295 aa17.26■□□□□ 0.35
HOMER3-205ENST00000542541 SORL1Q92673 2214 aa17.26■□□□□ 0.35
HOMER3-205ENST00000542541 CD81P60033 236 aa17.25■□□□□ 0.35
HOMER3-205ENST00000542541 AAMDCQ9H7C9 122 aa17.25■□□□□ 0.35
HOMER3-205ENST00000542541 SLC17A3O00476 420 aa17.25■□□□□ 0.35
HOMER3-205ENST00000542541 NDUFB4O95168 129 aa17.25■□□□□ 0.35
HOMER3-205ENST00000542541 ZNF688P0C7X2 276 aa17.25■□□□□ 0.35
HOMER3-205ENST00000542541 LINC00052Q96N35 136 aa17.25■□□□□ 0.35
HOMER3-205ENST00000542541 CD7P09564 240 aa17.24■□□□□ 0.35
HOMER3-205ENST00000542541 RANP62826 216 aaKnown RBP17.24■□□□□ 0.35
HOMER3-205ENST00000542541 FAM24BQ8N5W8 94 aa17.24■□□□□ 0.35
HOMER3-205ENST00000542541 TMPRSS5Q9H3S3 457 aa17.24■□□□□ 0.35
HOMER3-205ENST00000542541 NBEAL1Q6ZS30 2694 aa17.24■□□□□ 0.35
HOMER3-205ENST00000542541 TRAV8-2A0A0B4J237 113 aa17.23■□□□□ 0.35
HOMER3-205ENST00000542541 A0A1B0GV50 99 aa17.23■□□□□ 0.35
HOMER3-205ENST00000542541 OR11H12B2RN74 326 aa17.23■□□□□ 0.35
HOMER3-205ENST00000542541 PPT1P50897 306 aa17.23■□□□□ 0.35
HOMER3-205ENST00000542541 PSMG4Q5JS54 123 aa17.23■□□□□ 0.35
HOMER3-205ENST00000542541 PRR25Q96S07 402 aa17.23■□□□□ 0.35
HOMER3-205ENST00000542541 IGFL4Q6B9Z1 124 aa17.22■□□□□ 0.35
HOMER3-205ENST00000542541 MAP6D1Q9H9H5 199 aa17.22■□□□□ 0.35
HOMER3-205ENST00000542541 PRELID1Q9Y255 219 aa17.22■□□□□ 0.35
HOMER3-205ENST00000542541 DEFB131AP59861 70 aa17.21■□□□□ 0.35
HOMER3-205ENST00000542541 PSG3Q16557 428 aa17.21■□□□□ 0.35
HOMER3-205ENST00000542541 ODF3L2Q3SX64 289 aa17.21■□□□□ 0.35
HOMER3-205ENST00000542541 ZNF767PQ75MW2 155 aa17.21■□□□□ 0.35
HOMER3-205ENST00000542541 A0A1W2PRE2 83 aa17.21■□□□□ 0.35
HOMER3-205ENST00000542541 RNF182Q8N6D2 247 aa17.21■□□□□ 0.35
HOMER3-205ENST00000542541 Q9H3A6 140 aa17.21■□□□□ 0.35
HOMER3-205ENST00000542541 ICAM4Q14773 271 aa17.2■□□□□ 0.34
HOMER3-205ENST00000542541 EXOC3-AS1Q8N2X6 119 aa17.2■□□□□ 0.34
HOMER3-205ENST00000542541 MRPL53Q96EL3 112 aaKnown RBP17.2■□□□□ 0.34
HOMER3-205ENST00000542541 NKX6-2Q9C056 277 aaPredicted RBP17.2■□□□□ 0.34
HOMER3-205ENST00000542541 OTORQ9NRC9 128 aa17.2■□□□□ 0.34
HOMER3-205ENST00000542541 RAB14P61106 215 aa17.19■□□□□ 0.34
HOMER3-205ENST00000542541 ZNF738Q8NE65 137 aa17.19■□□□□ 0.34
HOMER3-205ENST00000542541 C19orf73Q9NVV2 129 aa17.19■□□□□ 0.34
HOMER3-205ENST00000542541 ARL2-SNX15V9GYD0 113 aa17.19■□□□□ 0.34
HOMER3-205ENST00000542541 IFITM2Q01629 132 aa17.18■□□□□ 0.34
HOMER3-205ENST00000542541 Q8N1Y9 231 aa17.18■□□□□ 0.34
HOMER3-205ENST00000542541 LYPD6BQ8NI32 183 aa17.18■□□□□ 0.34
HOMER3-205ENST00000542541 C20orf173Q96LM9 149 aa17.18■□□□□ 0.34
HOMER3-205ENST00000542541 PGPA6NDG6 321 aa17.18■□□□□ 0.34
HOMER3-205ENST00000542541 HLA-DMBP28068 263 aa17.18■□□□□ 0.34
HOMER3-205ENST00000542541 CSN1S1P47710 185 aa17.18■□□□□ 0.34
HOMER3-205ENST00000542541 UBE2G2P60604 165 aa17.18■□□□□ 0.34
HOMER3-205ENST00000542541 CCL20P78556 96 aa17.18■□□□□ 0.34
HOMER3-205ENST00000542541 PMS2P11Q13670 270 aa17.18■□□□□ 0.34
HOMER3-205ENST00000542541 RXFP4Q8TDU9 374 aa17.18■□□□□ 0.34
HOMER3-205ENST00000542541 MANBALQ9NQG1 85 aa17.18■□□□□ 0.34
HOMER3-205ENST00000542541 NOTCH1P46531 2555 aa17.17■□□□□ 0.34
HOMER3-205ENST00000542541 CMTM2Q8TAZ6 248 aa17.17■□□□□ 0.34
HOMER3-205ENST00000542541 RPUSD4Q96CM3 377 aaKnown RBP17.17■□□□□ 0.34
HOMER3-205ENST00000542541 IFNA1P01562 189 aa17.16■□□□□ 0.34
HOMER3-205ENST00000542541 SUMO1P63165 101 aaKnown RBP17.16■□□□□ 0.34
HOMER3-205ENST00000542541 EBLN2Q6P2I7 272 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms