RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 TMEM128Q5BJH2 165 aa13.77□□□□□ -0.21
LPCAT3-210ENST00000540090 SPANXN5Q5MJ07 72 aa13.77□□□□□ -0.21
LPCAT3-210ENST00000540090 CYP2G1PQ6ZSU1 146 aa13.77□□□□□ -0.21
LPCAT3-210ENST00000540090 C20orf144Q9BQM9 153 aa13.77□□□□□ -0.21
LPCAT3-210ENST00000540090 ZNF586Q9NXT0 402 aa13.77□□□□□ -0.21
LPCAT3-210ENST00000540090 ACOT7LQ6ZUV0 252 aa13.76□□□□□ -0.21
LPCAT3-210ENST00000540090 RPUSD4Q96CM3 377 aaKnown RBP13.76□□□□□ -0.21
LPCAT3-210ENST00000540090 DMBT1Q9UGM3 2413 aaPredicted RBP13.75□□□□□ -0.21
LPCAT3-210ENST00000540090 PRB4P10163 310 aaPredicted RBP13.75□□□□□ -0.21
LPCAT3-210ENST00000540090 KIR3DS1Q14943 382 aa13.75□□□□□ -0.21
LPCAT3-210ENST00000540090 LRRC20Q8TCA0 184 aa13.75□□□□□ -0.21
LPCAT3-210ENST00000540090 PGPEP1Q9NXJ5 209 aa13.75□□□□□ -0.21
LPCAT3-210ENST00000540090 RSL24D1Q9UHA3 163 aaKnown RBP13.75□□□□□ -0.21
LPCAT3-210ENST00000540090 STRAPQ9Y3F4 350 aaKnown RBP13.75□□□□□ -0.21
LPCAT3-210ENST00000540090 SMIM18P0DKX4 95 aa13.74□□□□□ -0.21
LPCAT3-210ENST00000540090 INAFM2P0DMQ5 153 aa13.74□□□□□ -0.21
LPCAT3-210ENST00000540090 SPCS2Q15005 226 aa13.74□□□□□ -0.21
LPCAT3-210ENST00000540090 Q6ZRN7 208 aaPredicted RBP13.74□□□□□ -0.21
LPCAT3-210ENST00000540090 TMED4Q7Z7H5 227 aa13.74□□□□□ -0.21
LPCAT3-210ENST00000540090 CCDC28AQ8IWP9 274 aa13.74□□□□□ -0.21
LPCAT3-210ENST00000540090 GAGE12BA1L429 117 aa13.73□□□□□ -0.21
LPCAT3-210ENST00000540090 H3BP45 60 aa13.73□□□□□ -0.21
LPCAT3-210ENST00000540090 MRPS12O15235 138 aaKnown RBP13.73□□□□□ -0.21
LPCAT3-210ENST00000540090 GAGE7O76087 117 aa13.73□□□□□ -0.21
LPCAT3-210ENST00000540090 RLN2P04090 185 aa13.73□□□□□ -0.21
LPCAT3-210ENST00000540090 OR5G3P0C626 314 aa13.73□□□□□ -0.21
LPCAT3-210ENST00000540090 LINC00869P0C866 280 aa13.73□□□□□ -0.21
LPCAT3-210ENST00000540090 GAGE12FP0CL80 117 aa13.73□□□□□ -0.21
LPCAT3-210ENST00000540090 GAGE12GP0CL81 117 aa13.73□□□□□ -0.21
LPCAT3-210ENST00000540090 GAGE12IP0CL82 117 aa13.73□□□□□ -0.21
LPCAT3-210ENST00000540090 LINC00315P59091 139 aa13.73□□□□□ -0.21
LPCAT3-210ENST00000540090 SELENOTP62341 195 aa13.73□□□□□ -0.21
LPCAT3-210ENST00000540090 LYPD1Q8N2G4 141 aa13.73□□□□□ -0.21
LPCAT3-210ENST00000540090 SOSTQ9BQB4 213 aa13.73□□□□□ -0.21
LPCAT3-210ENST00000540090 SMCO3A2RU48 225 aa13.72□□□□□ -0.21
LPCAT3-210ENST00000540090 VAMP1P23763 118 aa13.72□□□□□ -0.21
LPCAT3-210ENST00000540090 XGP55808 180 aa13.72□□□□□ -0.21
LPCAT3-210ENST00000540090 S100A7AQ86SG5 101 aa13.72□□□□□ -0.21
LPCAT3-210ENST00000540090 PMS2P5A8MQ11 134 aa13.71□□□□□ -0.21
LPCAT3-210ENST00000540090 CXCL2P19875 107 aa13.71□□□□□ -0.21
LPCAT3-210ENST00000540090 GFI1BQ5VTD9 330 aa13.71□□□□□ -0.21
LPCAT3-210ENST00000540090 PATE2Q6UY27 113 aa13.71□□□□□ -0.21
LPCAT3-210ENST00000540090 ZNF331Q9NQX6 463 aaPredicted RBP13.71□□□□□ -0.21
LPCAT3-210ENST00000540090 RNF24Q9Y225 148 aa13.71□□□□□ -0.21
LPCAT3-210ENST00000540090 VPS13BQ7Z7G8 4022 aa13.71□□□□□ -0.21
LPCAT3-210ENST00000540090 MYCBP2O75592 4640 aa13.7□□□□□ -0.22
LPCAT3-210ENST00000540090 SNURFLB1AK76 121 aa13.7□□□□□ -0.22
LPCAT3-210ENST00000540090 HOXB5P09067 269 aa13.7□□□□□ -0.22
LPCAT3-210ENST00000540090 ANXA7P20073 488 aaKnown RBP13.7□□□□□ -0.22
LPCAT3-210ENST00000540090 ID3Q02535 119 aa13.7□□□□□ -0.22
LPCAT3-210ENST00000540090 VSIG2Q96IQ7 327 aa13.7□□□□□ -0.22
LPCAT3-210ENST00000540090 PARD6GQ9BYG4 376 aaPredicted RBP13.7□□□□□ -0.22
LPCAT3-210ENST00000540090 ARL6Q9H0F7 186 aa13.7□□□□□ -0.22
LPCAT3-210ENST00000540090 PTTG2Q9NZH5 202 aa13.7□□□□□ -0.22
LPCAT3-210ENST00000540090 A0A096LPF7 62 aa13.69□□□□□ -0.22
LPCAT3-210ENST00000540090 SFT2D2O95562 160 aa13.69□□□□□ -0.22
LPCAT3-210ENST00000540090 FAUP35544 74 aaKnown RBP13.69□□□□□ -0.22
LPCAT3-210ENST00000540090 DAZ2Q13117 558 aaKnown RBP13.69□□□□□ -0.22
LPCAT3-210ENST00000540090 LCN15Q6UWW0 184 aa13.69□□□□□ -0.22
LPCAT3-210ENST00000540090 SLC50A1Q9BRV3 221 aa13.69□□□□□ -0.22
LPCAT3-210ENST00000540090 ARV1Q9H2C2 271 aa13.69□□□□□ -0.22
LPCAT3-210ENST00000540090 FABP12A6NFH5 140 aa13.68□□□□□ -0.22
LPCAT3-210ENST00000540090 K7EPK0 472 aa13.68□□□□□ -0.22
LPCAT3-210ENST00000540090 PPP1R1AQ13522 171 aa13.68□□□□□ -0.22
LPCAT3-210ENST00000540090 CDPF1Q6NVV7 123 aa13.68□□□□□ -0.22
LPCAT3-210ENST00000540090 DYNC2LI1Q8TCX1 351 aa13.68□□□□□ -0.22
LPCAT3-210ENST00000540090 TMPRSS5Q9H3S3 457 aa13.68□□□□□ -0.22
LPCAT3-210ENST00000540090 NPVFQ9HCQ7 196 aa13.68□□□□□ -0.22
LPCAT3-210ENST00000540090 PSENENQ9NZ42 101 aa13.68□□□□□ -0.22
LPCAT3-210ENST00000540090 CCDC59Q9P031 241 aaKnown RBP13.68□□□□□ -0.22
LPCAT3-210ENST00000540090 PRAC2D3DTV9 90 aa13.67□□□□□ -0.22
LPCAT3-210ENST00000540090 FUSP35637 526 aaKnown RBP eCLIP13.67□□□□□ -0.22
LPCAT3-210ENST00000540090 POLR2GP62487 172 aaKnown RBP eCLIP13.67□□□□□ -0.22
LPCAT3-210ENST00000540090 C4orf46Q504U0 113 aa13.67□□□□□ -0.22
LPCAT3-210ENST00000540090 Q6ZTI0 123 aa13.67□□□□□ -0.22
LPCAT3-210ENST00000540090 SLC25A21Q9BQT8 299 aaPredicted RBP13.67□□□□□ -0.22
LPCAT3-210ENST00000540090 EREGO14944 169 aa13.66□□□□□ -0.22
LPCAT3-210ENST00000540090 SIVA1O15304 175 aa13.66□□□□□ -0.22
LPCAT3-210ENST00000540090 SNRPCP09234 159 aaKnown RBP13.66□□□□□ -0.22
LPCAT3-210ENST00000540090 TNFSF8P32971 234 aa13.66□□□□□ -0.22
LPCAT3-210ENST00000540090 PXDC1Q5TGL8 231 aa13.66□□□□□ -0.22
LPCAT3-210ENST00000540090 Q5VSD8 79 aa13.66□□□□□ -0.22
LPCAT3-210ENST00000540090 CCDC190Q86UF4 302 aa13.66□□□□□ -0.22
LPCAT3-210ENST00000540090 ZBTB8BQ8NAP8 495 aaPredicted RBP13.66□□□□□ -0.22
LPCAT3-210ENST00000540090 C18orf15Q96N68 181 aa13.66□□□□□ -0.22
LPCAT3-210ENST00000540090 FNDC10F2Z333 226 aa13.65□□□□□ -0.22
LPCAT3-210ENST00000540090 RRAS2P62070 204 aaPredicted RBP13.65□□□□□ -0.22
LPCAT3-210ENST00000540090 LINC00305Q7Z4B0 112 aa13.65□□□□□ -0.22
LPCAT3-210ENST00000540090 ZNF431Q8TF32 576 aaPredicted RBP13.65□□□□□ -0.22
LPCAT3-210ENST00000540090 SMIM8Q96KF7 97 aa13.65□□□□□ -0.22
LPCAT3-210ENST00000540090 PYGO2Q9BRQ0 406 aa13.65□□□□□ -0.22
LPCAT3-210ENST00000540090 TRAV12-3A0A0B4J271 114 aa13.64□□□□□ -0.23
LPCAT3-210ENST00000540090 CCNKO75909 580 aa13.64□□□□□ -0.23
LPCAT3-210ENST00000540090 CT45A10P0DMU9 189 aa13.64□□□□□ -0.23
LPCAT3-210ENST00000540090 AP3S2P59780 193 aa13.64□□□□□ -0.23
LPCAT3-210ENST00000540090 ERVFC1-1P60608 527 aa13.64□□□□□ -0.23
LPCAT3-210ENST00000540090 TEPPQ6URK8 271 aa13.64□□□□□ -0.23
LPCAT3-210ENST00000540090 BPIFA4PQ86YQ2 179 aa13.64□□□□□ -0.23
LPCAT3-210ENST00000540090 FRZBQ92765 325 aa13.64□□□□□ -0.23
LPCAT3-210ENST00000540090 TRIM63Q969Q1 353 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms