RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 CD3GP09693 182 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 COX4I1P13073 169 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 ZNF93P35789 620 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-202ENST00000535689 PPP1CCP36873 323 aaKnown RBP1.98□□□□□ -2.09
SNHG1-202ENST00000535689 SERPINB10P48595 397 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 PSMD7P51665 324 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 AP2S1P53680 142 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-202ENST00000535689 LINC00315P59091 139 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 UBE2KP61086 200 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 PSME3P61289 254 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 B2MP61769 119 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 REG3AQ06141 175 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 USF2Q15853 346 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-202ENST00000535689 PRSS8Q16651 343 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 KLK9Q2XQG4 91 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 C12orf74Q32Q52 190 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 LINC00483Q53H64 154 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 THOC7Q6I9Y2 204 aaKnown RBP1.98□□□□□ -2.09
SNHG1-202ENST00000535689 ZFP41Q8N8Y5 198 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 OR13C9Q8NGT0 318 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 OR5AK2Q8NH90 309 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 C15orf40Q8WUR7 153 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 APH1BQ8WW43 257 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 DEDD2Q8WXF8 326 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 PTX4Q96A99 478 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 OR10C1Q96KK4 312 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 GINS3Q9BRX5 216 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 DCUN1D5Q9BTE7 237 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 THTPAQ9BU02 230 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 ZNF436Q9C0F3 470 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-202ENST00000535689 OR51E2Q9H255 320 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 SAV1Q9H4B6 383 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-202ENST00000535689 TMEM138Q9NPI0 162 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 SAR1AQ9NR31 198 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 SLC2A9Q9NRM0 540 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 CKLFQ9UBR5 152 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 KLK9Q9UKQ9 250 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 FLVCR2Q9UPI3 526 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 PSG8Q9UQ74 426 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 RBM7Q9Y580 266 aaKnown RBP1.98□□□□□ -2.09
SNHG1-202ENST00000535689 RFNGQ9Y644 331 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 TRAV3A0A0B4J244 114 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 A0A0U1RQV1 116 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 A0A1W2PQL4 384 aaPredicted RBP1.97□□□□□ -2.09
SNHG1-202ENST00000535689 DAPL1A0PJW8 107 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 EDF1O60869 148 aaKnown RBP1.97□□□□□ -2.09
SNHG1-202ENST00000535689 ADAP1O75689 374 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 HRASP01112 189 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 C1QBP02746 253 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 IGKV1-16P04430 117 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 UBBP0CG47 229 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 RPL27AP46776 148 aaKnown RBP1.97□□□□□ -2.09
SNHG1-202ENST00000535689 DAD1P61803 113 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 MRPS15P82914 257 aaKnown RBP1.97□□□□□ -2.09
SNHG1-202ENST00000535689 CDK10Q15131 360 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 PIGYQ3MUY2 71 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 SMUG1Q53HV7 270 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 TMPRSS11AQ6ZMR5 421 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 CACNG8Q8WXS5 425 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 TLCD1Q96CP7 247 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 DGCR14Q96DF8 476 aaKnown RBP1.97□□□□□ -2.09
SNHG1-202ENST00000535689 NRBF2Q96F24 287 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 ABHD14BQ96IU4 210 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 NIPSNAP1Q9BPW8 284 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 TMEM70Q9BUB7 260 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 CHAC1Q9BUX1 264 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 ZNF430Q9H8G1 570 aaPredicted RBP1.97□□□□□ -2.09
SNHG1-202ENST00000535689 TMBIM4Q9HC24 238 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 PLEKHJ1Q9NW61 149 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 RHBDL2Q9NX52 303 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 SMPXQ9UHP9 88 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 DNAH11Q96DT5 4516 aa1.97□□□□□ -2.09
SNHG1-202ENST00000535689 DYNC1H1Q14204 4646 aaKnown RBP1.97□□□□□ -2.09
SNHG1-202ENST00000535689 APOBP04114 4563 aaKnown RBP1.96□□□□□ -2.1
SNHG1-202ENST00000535689 IGHV7-4-1A0A0J9YVY3 117 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 LOC100506127A0A0U1RQW1 187 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 A0A1B0GVX0 72 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 LRCOL1A6NCL2 159 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 OR2T8A6NH00 312 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 CENPXA8MT69 81 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 TEX46H3BTG2 121 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 J3QLW9 94 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 M0R1X1 148 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 GABRPO00591 440 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 PDCD6O75340 191 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 CDRT1O95170 752 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 HLA-AP01891 365 aaKnown RBP1.96□□□□□ -2.1
SNHG1-202ENST00000535689 HBE1P02100 147 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 APOA1P02647 267 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 APCSP02743 223 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 SMR3BP02814 79 aaPredicted RBP1.96□□□□□ -2.1
SNHG1-202ENST00000535689 RAB5AP20339 215 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 NPPCP23582 126 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 DEFB131AP59861 70 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 SNRPD3P62318 126 aaKnown RBP1.96□□□□□ -2.1
SNHG1-202ENST00000535689 HMGN3Q15651 99 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 VAMP3Q15836 100 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 TDRG1Q3Y452 100 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 CCDC58Q4VC31 144 aa1.96□□□□□ -2.1
SNHG1-202ENST00000535689 RPL39P5Q59GN2 51 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms