RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 ADGRL3Q9HAR2 1447 aa0.58□□□□□ -2.32
CCDC7-207ENST00000535327 RIIAD1A6NNX1 92 aa0.58□□□□□ -2.32
CCDC7-207ENST00000535327 B4DSR2 109 aa0.58□□□□□ -2.32
CCDC7-207ENST00000535327 LYRM1O43325 122 aa0.58□□□□□ -2.32
CCDC7-207ENST00000535327 CAPZBP47756 277 aa0.58□□□□□ -2.32
CCDC7-207ENST00000535327 TMBIM6P55061 237 aa0.58□□□□□ -2.32
CCDC7-207ENST00000535327 GNG5P63218 68 aa0.58□□□□□ -2.32
CCDC7-207ENST00000535327 KLRD1Q13241 179 aa0.58□□□□□ -2.32
CCDC7-207ENST00000535327 CIRBPQ14011 172 aaKnown RBP0.58□□□□□ -2.32
CCDC7-207ENST00000535327 PATE2Q6UY27 113 aa0.58□□□□□ -2.32
CCDC7-207ENST00000535327 ZC2HC1AQ96GY0 325 aa0.58□□□□□ -2.32
CCDC7-207ENST00000535327 PBDC1Q9BVG4 233 aa0.58□□□□□ -2.32
CCDC7-207ENST00000535327 C10orf95Q9H7T3 257 aa0.58□□□□□ -2.32
CCDC7-207ENST00000535327 LYRM2Q9NU23 88 aaPredicted RBP0.58□□□□□ -2.32
CCDC7-207ENST00000535327 PRNDQ9UKY0 176 aa0.58□□□□□ -2.32
CCDC7-207ENST00000535327 CEP164Q9UPV0 1460 aa0.58□□□□□ -2.32
CCDC7-207ENST00000535327 MUC4Q99102 2169 aa0.57□□□□□ -2.32
CCDC7-207ENST00000535327 CAMSAP1Q5T5Y3 1602 aa0.57□□□□□ -2.32
CCDC7-207ENST00000535327 PHRF1Q9P1Y6 1649 aaKnown RBP0.57□□□□□ -2.32
CCDC7-207ENST00000535327 UHRF1BP1Q6BDS2 1440 aa0.57□□□□□ -2.32
CCDC7-207ENST00000535327 ZNF462Q96JM2 2506 aa0.57□□□□□ -2.32
CCDC7-207ENST00000535327 TRAV23DV6A0A075B6W5 121 aa0.57□□□□□ -2.32
CCDC7-207ENST00000535327 A0A096LPI6 279 aa0.57□□□□□ -2.32
CCDC7-207ENST00000535327 TRAV5A0A0B4J249 113 aa0.57□□□□□ -2.32
CCDC7-207ENST00000535327 hDV103S1A0JD37 113 aa0.57□□□□□ -2.32
CCDC7-207ENST00000535327 OGNP20774 298 aaKnown RBP0.57□□□□□ -2.32
CCDC7-207ENST00000535327 ARF6P62330 175 aa0.57□□□□□ -2.32
CCDC7-207ENST00000535327 MRPS15P82914 257 aaKnown RBP0.57□□□□□ -2.32
CCDC7-207ENST00000535327 MALSU1Q96EH3 234 aa0.57□□□□□ -2.32
CCDC7-207ENST00000535327 NCAPD3P42695 1498 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 RER1O15258 196 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 HIST1H2BKO60814 126 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 IGLV1-51P01701 117 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 TRGC2P03986 189 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 HIST1H2BJP06899 126 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 PPP1R2P41236 205 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 ARPP19P56211 112 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 HACD4Q5VWC8 232 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 DHRS4L2Q6PKH6 230 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 OR13C6PQ8NH95 151 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 PAIP2Q9BPZ3 127 aaKnown RBP0.56□□□□□ -2.32
CCDC7-207ENST00000535327 SH3BGRL3Q9H299 93 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 USP24Q9UPU5 2620 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 ZDBF2Q9HCK1 2354 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 RFX7Q2KHR2 1363 aa0.56□□□□□ -2.32
CCDC7-207ENST00000535327 CXCL1P09341 107 aa0.55□□□□□ -2.32
CCDC7-207ENST00000535327 FXYD6P3P58550 94 aa0.55□□□□□ -2.32
CCDC7-207ENST00000535327 SNCBQ16143 134 aa0.55□□□□□ -2.32
CCDC7-207ENST00000535327 CROCCP2Q86T23 111 aa0.55□□□□□ -2.32
CCDC7-207ENST00000535327 EXOC3-AS1Q8N2X6 119 aa0.55□□□□□ -2.32
CCDC7-207ENST00000535327 MYH2Q9UKX2 1941 aa0.54□□□□□ -2.32
CCDC7-207ENST00000535327 GPR31O00270 319 aa0.54□□□□□ -2.32
CCDC7-207ENST00000535327 IFNA1P01562 189 aa0.54□□□□□ -2.32
CCDC7-207ENST00000535327 INSL3P51460 131 aa0.54□□□□□ -2.32
CCDC7-207ENST00000535327 TMEM14EPQ6UXP3 125 aa0.54□□□□□ -2.32
CCDC7-207ENST00000535327 GPX7Q96SL4 187 aaPredicted RBP0.54□□□□□ -2.32
CCDC7-207ENST00000535327 STOML2Q9UJZ1 356 aa0.54□□□□□ -2.32
CCDC7-207ENST00000535327 TRBV30A0A0K0K1B3 111 aa0.53□□□□□ -2.32
CCDC7-207ENST00000535327 EIF3IQ13347 325 aaKnown RBP0.53□□□□□ -2.32
CCDC7-207ENST00000535327 Q6ZS92 163 aa0.53□□□□□ -2.32
CCDC7-207ENST00000535327 TMED4Q7Z7H5 227 aa0.53□□□□□ -2.32
CCDC7-207ENST00000535327 BOKQ9UMX3 212 aaPredicted RBP0.53□□□□□ -2.32
CCDC7-207ENST00000535327 CAMSAP2Q08AD1 1489 aa0.53□□□□□ -2.33
CCDC7-207ENST00000535327 COL24A1Q17RW2 1714 aa0.52□□□□□ -2.33
CCDC7-207ENST00000535327 N4BP2Q86UW6 1770 aaPredicted RBP0.52□□□□□ -2.33
CCDC7-207ENST00000535327 KDELR1P24390 212 aa0.52□□□□□ -2.33
CCDC7-207ENST00000535327 FOXA3P55318 350 aaPredicted RBP0.52□□□□□ -2.33
CCDC7-207ENST00000535327 RPL19P84098 196 aaKnown RBP0.52□□□□□ -2.33
CCDC7-207ENST00000535327 C1orf140Q5VVS0 124 aa0.52□□□□□ -2.33
CCDC7-207ENST00000535327 GLIPR1L1Q6UWM5 242 aa0.52□□□□□ -2.33
CCDC7-207ENST00000535327 LINC00299Q6ZSB3 139 aa0.52□□□□□ -2.33
CCDC7-207ENST00000535327 ATOH7Q8N100 152 aa0.52□□□□□ -2.33
CCDC7-207ENST00000535327 NEK7Q8TDX7 302 aa0.52□□□□□ -2.33
CCDC7-207ENST00000535327 GINS3Q9BRX5 216 aa0.52□□□□□ -2.33
CCDC7-207ENST00000535327 PTPRDP23468 1912 aa0.52□□□□□ -2.33
CCDC7-207ENST00000535327 CACNA1EQ15878 2313 aa0.52□□□□□ -2.33
CCDC7-207ENST00000535327 ODAMA1E959 279 aa0.51□□□□□ -2.33
CCDC7-207ENST00000535327 C9orf170A2RU37 121 aa0.51□□□□□ -2.33
CCDC7-207ENST00000535327 NUPR2A6NF83 97 aa0.51□□□□□ -2.33
CCDC7-207ENST00000535327 K7EIL1 84 aa0.51□□□□□ -2.33
CCDC7-207ENST00000535327 K7ERJ3 54 aa0.51□□□□□ -2.33
CCDC7-207ENST00000535327 BASP1P80723 227 aaKnown RBP0.51□□□□□ -2.33
CCDC7-207ENST00000535327 MSMO1Q15800 293 aa0.51□□□□□ -2.33
CCDC7-207ENST00000535327 FAM216BQ8N7L0 139 aa0.51□□□□□ -2.33
CCDC7-207ENST00000535327 NUP35Q8NFH5 326 aa0.51□□□□□ -2.33
CCDC7-207ENST00000535327 LAMTOR3Q9UHA4 124 aa0.51□□□□□ -2.33
CCDC7-207ENST00000535327 JPT1Q9UK76 154 aa0.51□□□□□ -2.33
CCDC7-207ENST00000535327 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
CCDC7-207ENST00000535327 NAV3Q8IVL0 2385 aa0.5□□□□□ -2.33
CCDC7-207ENST00000535327 TRPM1Q7Z4N2 1603 aa0.5□□□□□ -2.33
CCDC7-207ENST00000535327 ERBINQ96RT1 1412 aa0.5□□□□□ -2.33
CCDC7-207ENST00000535327 ZNF727A8MUV8 499 aa0.5□□□□□ -2.33
CCDC7-207ENST00000535327 C5orf67F2Z3F1 127 aa0.5□□□□□ -2.33
CCDC7-207ENST00000535327 CST7O76096 145 aa0.5□□□□□ -2.33
CCDC7-207ENST00000535327 CD14P08571 375 aa0.5□□□□□ -2.33
CCDC7-207ENST00000535327 IDO1P14902 403 aa0.5□□□□□ -2.33
CCDC7-207ENST00000535327 RPL35P42766 123 aaKnown RBP0.5□□□□□ -2.33
CCDC7-207ENST00000535327 HBBP68871 147 aa0.5□□□□□ -2.33
CCDC7-207ENST00000535327 POU6F1Q14863 301 aa0.5□□□□□ -2.33
CCDC7-207ENST00000535327 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms