RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 BAXQ07812 192 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 OPCMLQ14982 345 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 LGALS9BQ3B8N2 356 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 C10orf113Q5VZT2 155 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 C1orf158Q8N1D5 194 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 POM121L12Q8N7R1 296 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 SCRT1Q9BWW7 348 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 ARL6Q9H0F7 186 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 SLC25A22Q9H936 323 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 GSKIPQ9P0R6 139 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 AGRNO00468 2067 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 C5orf51A6NDU8 294 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 IGLL5B9A064 214 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 H3BP45 60 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 SCGB1D2O95969 90 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 NMBP08949 121 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 CXCL3P19876 107 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 BTF3P20290 206 aaKnown RBP7.44□□□□□ -1.22
CSDE1-217ENST00000534699 Q6ZTC4 211 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 ZNF738Q8NE65 137 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 LRRC20Q8TCA0 184 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 C20orf173Q96LM9 149 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 ZNF331Q9NQX6 463 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-217ENST00000534699 TRBV7-9A0A0J9YWB2 115 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 LOC102723971A0A1B0GUV8 181 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 LEPP41159 167 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 CAMLGP49069 296 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 CNN1P51911 297 aaKnown RBP7.44□□□□□ -1.22
CSDE1-217ENST00000534699 GDF5OSQ5U4N7 250 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 PATE2Q6UY27 113 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 TMEM182Q6ZP80 229 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-217ENST00000534699 C16orf74Q96GX8 76 aa7.44□□□□□ -1.22
CSDE1-217ENST00000534699 A0A1B0GVG6 124 aa7.43□□□□□ -1.22
CSDE1-217ENST00000534699 BCAP31P51572 246 aa7.43□□□□□ -1.22
CSDE1-217ENST00000534699 NUDT15Q9NV35 164 aa7.43□□□□□ -1.22
CSDE1-217ENST00000534699 PPP1R14DQ9NXH3 145 aa7.43□□□□□ -1.22
CSDE1-217ENST00000534699 RYR2Q92736 4967 aa7.43□□□□□ -1.22
CSDE1-217ENST00000534699 E5RGE8 158 aa7.43□□□□□ -1.22
CSDE1-217ENST00000534699 UPK1BO75841 260 aa7.43□□□□□ -1.22
CSDE1-217ENST00000534699 LINC00305Q7Z4B0 112 aa7.43□□□□□ -1.22
CSDE1-217ENST00000534699 TMEM252Q8N6L7 170 aa7.43□□□□□ -1.22
CSDE1-217ENST00000534699 ARL6IP6Q8N6S5 226 aa7.43□□□□□ -1.22
CSDE1-217ENST00000534699 OR10J6PQ8NGY7 276 aa7.43□□□□□ -1.22
CSDE1-217ENST00000534699 MGST2Q99735 147 aa7.43□□□□□ -1.22
CSDE1-217ENST00000534699 MRPL32Q9BYC8 188 aaKnown RBP7.43□□□□□ -1.22
CSDE1-217ENST00000534699 H7BYZ3 331 aa7.42□□□□□ -1.22
CSDE1-217ENST00000534699 PET100P0DJ07 73 aa7.42□□□□□ -1.22
CSDE1-217ENST00000534699 IGLC2P0DOY2 106 aa7.42□□□□□ -1.22
CSDE1-217ENST00000534699 CDKN1BP46527 198 aa7.42□□□□□ -1.22
CSDE1-217ENST00000534699 DEFA1P59665 94 aa7.42□□□□□ -1.22
CSDE1-217ENST00000534699 DEFA3P59666 94 aa7.42□□□□□ -1.22
CSDE1-217ENST00000534699 PARD6GQ9BYG4 376 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-217ENST00000534699 RRAS2P62070 204 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-217ENST00000534699 ENKURQ8TC29 256 aa7.42□□□□□ -1.22
CSDE1-217ENST00000534699 TMEM208Q9BTX3 173 aa7.42□□□□□ -1.22
CSDE1-217ENST00000534699 SLC35B3Q9H1N7 401 aa7.42□□□□□ -1.22
CSDE1-217ENST00000534699 SLC39A9Q9NUM3 307 aa7.42□□□□□ -1.22
CSDE1-217ENST00000534699 LSM5Q9Y4Y9 91 aaKnown RBP7.42□□□□□ -1.22
CSDE1-217ENST00000534699 CBY3A6NI87 242 aa7.41□□□□□ -1.22
CSDE1-217ENST00000534699 H3BNG1 76 aa7.41□□□□□ -1.22
CSDE1-217ENST00000534699 CRXO43186 299 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-217ENST00000534699 GATA2P23769 480 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-217ENST00000534699 DAD1P61803 113 aa7.41□□□□□ -1.22
CSDE1-217ENST00000534699 ARL16Q0P5N6 197 aa7.41□□□□□ -1.22
CSDE1-217ENST00000534699 NRARPQ7Z6K4 114 aa7.41□□□□□ -1.22
CSDE1-217ENST00000534699 RPUSD4Q96CM3 377 aaKnown RBP7.41□□□□□ -1.22
CSDE1-217ENST00000534699 ZNF503Q96F45 646 aa7.41□□□□□ -1.22
CSDE1-217ENST00000534699 CELA1Q9UNI1 258 aa7.41□□□□□ -1.22
CSDE1-217ENST00000534699 NPIPB6E9PJ23 425 aa7.41□□□□□ -1.22
CSDE1-217ENST00000534699 DEFB4AO15263 64 aa7.41□□□□□ -1.22
CSDE1-217ENST00000534699 HIST1H1EP10412 219 aaKnown RBP7.41□□□□□ -1.22
CSDE1-217ENST00000534699 CAV2P51636 162 aa7.41□□□□□ -1.22
CSDE1-217ENST00000534699 FAM222AQ5U5X8 452 aa7.41□□□□□ -1.22
CSDE1-217ENST00000534699 SAT2Q96F10 170 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-217ENST00000534699 LINC00477Q96M19 166 aa7.41□□□□□ -1.22
CSDE1-217ENST00000534699 TENM2Q9NT68 2774 aa7.4□□□□□ -1.22
CSDE1-217ENST00000534699 TRAV6A0A075B6T7 132 aa7.4□□□□□ -1.22
CSDE1-217ENST00000534699 LINC00854A0A1B0GVQ3 168 aa7.4□□□□□ -1.22
CSDE1-217ENST00000534699 C17orf112F2Z3M2 114 aa7.4□□□□□ -1.22
CSDE1-217ENST00000534699 CCNKO75909 580 aa7.4□□□□□ -1.22
CSDE1-217ENST00000534699 LYPD1Q8N2G4 141 aa7.4□□□□□ -1.22
CSDE1-217ENST00000534699 TMEM263Q8WUH6 116 aaKnown RBP7.4□□□□□ -1.22
CSDE1-217ENST00000534699 C18orf15Q96N68 181 aa7.4□□□□□ -1.22
CSDE1-217ENST00000534699 YTHDF2Q9Y5A9 579 aaKnown RBP7.4□□□□□ -1.22
CSDE1-217ENST00000534699 STARD9Q9P2P6 4700 aa7.4□□□□□ -1.22
CSDE1-217ENST00000534699 RHOBP62745 196 aa7.4□□□□□ -1.23
CSDE1-217ENST00000534699 CCDC28AQ8IWP9 274 aa7.4□□□□□ -1.23
CSDE1-217ENST00000534699 LINC00612Q8N6U2 182 aa7.4□□□□□ -1.23
CSDE1-217ENST00000534699 ASB13Q8WXK3 278 aa7.4□□□□□ -1.23
CSDE1-217ENST00000534699 TMEM37Q8WXS4 190 aa7.4□□□□□ -1.23
CSDE1-217ENST00000534699 SEC22CQ9BRL7 303 aa7.4□□□□□ -1.23
CSDE1-217ENST00000534699 MARVELD1Q9BSK0 173 aa7.4□□□□□ -1.23
CSDE1-217ENST00000534699 LYSTQ99698 3801 aa7.39□□□□□ -1.23
CSDE1-217ENST00000534699 FAM25EA8MYX2 175 aa7.39□□□□□ -1.23
CSDE1-217ENST00000534699 SLC25A5P05141 298 aaKnown RBP7.39□□□□□ -1.23
CSDE1-217ENST00000534699 PYGO2Q9BRQ0 406 aa7.39□□□□□ -1.23
CSDE1-217ENST00000534699 RYR3Q15413 4870 aa7.39□□□□□ -1.23
CSDE1-217ENST00000534699 FAM24AA6NFZ4 105 aa7.39□□□□□ -1.23
CSDE1-217ENST00000534699 HIST1H1AQ02539 215 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-217ENST00000534699 RAB32Q13637 225 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 1267.1 ms