RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 A0A1W2PPQ1 181 aa8.97□□□□□ -0.97
COPB1-209ENST00000533096 SNURFLB1AK76 121 aa8.97□□□□□ -0.97
COPB1-209ENST00000533096 H7BYZ3 331 aa8.97□□□□□ -0.97
COPB1-209ENST00000533096 HYPMO75409 117 aa8.97□□□□□ -0.97
COPB1-209ENST00000533096 SSBP1Q04837 148 aaKnown RBP8.97□□□□□ -0.97
COPB1-209ENST00000533096 IL18Q14116 193 aa8.97□□□□□ -0.97
COPB1-209ENST00000533096 CCDC190Q86UF4 302 aa8.97□□□□□ -0.97
COPB1-209ENST00000533096 RNASE8Q8TDE3 154 aaKnown RBP8.97□□□□□ -0.97
COPB1-209ENST00000533096 TMEM263Q8WUH6 116 aaKnown RBP8.97□□□□□ -0.97
COPB1-209ENST00000533096 ZNF503Q96F45 646 aa8.97□□□□□ -0.97
COPB1-209ENST00000533096 UPK3BQ9BT76 320 aa8.97□□□□□ -0.97
COPB1-209ENST00000533096 SHANK2-AS3Q9BTD1 123 aa8.97□□□□□ -0.97
COPB1-209ENST00000533096 H3BP45 60 aa8.96□□□□□ -0.98
COPB1-209ENST00000533096 MED6O75586 246 aa8.96□□□□□ -0.98
COPB1-209ENST00000533096 RPL7P18124 248 aaKnown RBP8.96□□□□□ -0.98
COPB1-209ENST00000533096 KRTAP10-1P60331 282 aa8.96□□□□□ -0.98
COPB1-209ENST00000533096 MRPS10P82664 201 aaKnown RBP8.96□□□□□ -0.98
COPB1-209ENST00000533096 CYP2G1PQ6ZSU1 146 aa8.96□□□□□ -0.98
COPB1-209ENST00000533096 TMED4Q7Z7H5 227 aa8.96□□□□□ -0.98
COPB1-209ENST00000533096 DIRAS2Q96HU8 199 aa8.96□□□□□ -0.98
COPB1-209ENST00000533096 TRAV12-3A0A0B4J271 114 aa8.95□□□□□ -0.98
COPB1-209ENST00000533096 H3BRN7 92 aa8.95□□□□□ -0.98
COPB1-209ENST00000533096 H3BTX0 84 aa8.95□□□□□ -0.98
COPB1-209ENST00000533096 SIVA1O15304 175 aa8.95□□□□□ -0.98
COPB1-209ENST00000533096 SYNGR2O43760 224 aa8.95□□□□□ -0.98
COPB1-209ENST00000533096 PITX3O75364 302 aa8.95□□□□□ -0.98
COPB1-209ENST00000533096 SRPXP78539 464 aa8.95□□□□□ -0.98
COPB1-209ENST00000533096 CTF1Q16619 201 aa8.95□□□□□ -0.98
COPB1-209ENST00000533096 SMIM4Q8WVI0 70 aa8.95□□□□□ -0.98
COPB1-209ENST00000533096 TMPRSS5Q9H3S3 457 aa8.95□□□□□ -0.98
COPB1-209ENST00000533096 TRGV2A0A075B6R0 118 aa8.94□□□□□ -0.98
COPB1-209ENST00000533096 A0A096LPF7 62 aa8.94□□□□□ -0.98
COPB1-209ENST00000533096 PMS2P5A8MQ11 134 aa8.94□□□□□ -0.98
COPB1-209ENST00000533096 HOXB5P09067 269 aa8.94□□□□□ -0.98
COPB1-209ENST00000533096 VAMP1P23763 118 aa8.94□□□□□ -0.98
COPB1-209ENST00000533096 ERVFC1-1P60608 527 aa8.94□□□□□ -0.98
COPB1-209ENST00000533096 HAMPP81172 84 aa8.94□□□□□ -0.98
COPB1-209ENST00000533096 Q6ZTI0 123 aa8.94□□□□□ -0.98
COPB1-209ENST00000533096 ACOT7LQ6ZUV0 252 aa8.94□□□□□ -0.98
COPB1-209ENST00000533096 VSIG2Q96IQ7 327 aa8.94□□□□□ -0.98
COPB1-209ENST00000533096 CIB3Q96Q77 187 aaPredicted RBP8.94□□□□□ -0.98
COPB1-209ENST00000533096 ARL6Q9H0F7 186 aa8.94□□□□□ -0.98
COPB1-209ENST00000533096 STRAPQ9Y3F4 350 aaKnown RBP8.94□□□□□ -0.98
COPB1-209ENST00000533096 ANKRD20A5PA0PJZ0 165 aa8.93□□□□□ -0.98
COPB1-209ENST00000533096 PRAC2D3DTV9 90 aa8.93□□□□□ -0.98
COPB1-209ENST00000533096 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
COPB1-209ENST00000533096 J3QL48 77 aa8.93□□□□□ -0.98
COPB1-209ENST00000533096 LINC00869P0C866 280 aa8.93□□□□□ -0.98
COPB1-209ENST00000533096 DNAH10OSP0CZ25 163 aa8.93□□□□□ -0.98
COPB1-209ENST00000533096 RRAS2P62070 204 aaPredicted RBP8.93□□□□□ -0.98
COPB1-209ENST00000533096 GFI1BQ5VTD9 330 aa8.93□□□□□ -0.98
COPB1-209ENST00000533096 Q6ZRN7 208 aaPredicted RBP8.93□□□□□ -0.98
COPB1-209ENST00000533096 LINC00612Q8N6U2 182 aa8.93□□□□□ -0.98
COPB1-209ENST00000533096 PRSS46E5RG02 174 aa8.92□□□□□ -0.98
COPB1-209ENST00000533096 H3BNG1 76 aa8.92□□□□□ -0.98
COPB1-209ENST00000533096 NXPH4O95158 308 aa8.92□□□□□ -0.98
COPB1-209ENST00000533096 PATE2Q6UY27 113 aa8.92□□□□□ -0.98
COPB1-209ENST00000533096 IGHV3-53P01767 116 aa8.91□□□□□ -0.98
COPB1-209ENST00000533096 ICAM4Q14773 271 aa8.91□□□□□ -0.98
COPB1-209ENST00000533096 C18orf15Q96N68 181 aa8.91□□□□□ -0.98
COPB1-209ENST00000533096 GSN-AS1Q9NRJ2 163 aa8.91□□□□□ -0.98
COPB1-209ENST00000533096 PSENENQ9NZ42 101 aa8.91□□□□□ -0.98
COPB1-209ENST00000533096 RABL2BQ9UNT1 228 aa8.91□□□□□ -0.98
COPB1-209ENST00000533096 A0A087WTM6 91 aa8.9□□□□□ -0.98
COPB1-209ENST00000533096 A0A087X0K7 114 aa8.9□□□□□ -0.98
COPB1-209ENST00000533096 TRGV1A0A0A0MS02 117 aa8.9□□□□□ -0.98
COPB1-209ENST00000533096 CTDSPLO15194 276 aa8.9□□□□□ -0.98
COPB1-209ENST00000533096 PAX4O43316 350 aa8.9□□□□□ -0.98
COPB1-209ENST00000533096 CT45A10P0DMU9 189 aa8.9□□□□□ -0.98
COPB1-209ENST00000533096 POLR2GP62487 172 aaKnown RBP eCLIP8.9□□□□□ -0.98
COPB1-209ENST00000533096 TMEM128Q5BJH2 165 aa8.9□□□□□ -0.98
COPB1-209ENST00000533096 S100A7AQ86SG5 101 aa8.9□□□□□ -0.98
COPB1-209ENST00000533096 C20orf144Q9BQM9 153 aa8.9□□□□□ -0.98
COPB1-209ENST00000533096 ARV1Q9H2C2 271 aa8.9□□□□□ -0.98
COPB1-209ENST00000533096 ZNF331Q9NQX6 463 aaPredicted RBP8.9□□□□□ -0.98
COPB1-209ENST00000533096 PIGBOS1A0A0B4J2F0 54 aa8.89□□□□□ -0.99
COPB1-209ENST00000533096 DUXBA0A1W2PPF3 345 aa8.89□□□□□ -0.99
COPB1-209ENST00000533096 CCNKO75909 580 aa8.89□□□□□ -0.99
COPB1-209ENST00000533096 GCSHP23434 173 aa8.89□□□□□ -0.99
COPB1-209ENST00000533096 SPCS2Q15005 226 aa8.89□□□□□ -0.99
COPB1-209ENST00000533096 CDPF1Q6NVV7 123 aa8.89□□□□□ -0.99
COPB1-209ENST00000533096 LINC00305Q7Z4B0 112 aa8.89□□□□□ -0.99
COPB1-209ENST00000533096 ZBTB8BQ8NAP8 495 aaPredicted RBP8.89□□□□□ -0.99
COPB1-209ENST00000533096 ZNF431Q8TF32 576 aaPredicted RBP8.89□□□□□ -0.99
COPB1-209ENST00000533096 FUT9Q9Y231 359 aa8.89□□□□□ -0.99
COPB1-209ENST00000533096 TRAV9-2A0A087WT02 112 aa8.88□□□□□ -0.99
COPB1-209ENST00000533096 LINC00854A0A1B0GVQ3 168 aa8.88□□□□□ -0.99
COPB1-209ENST00000533096 GOSR2O14653 212 aa8.88□□□□□ -0.99
COPB1-209ENST00000533096 MRPS12O15235 138 aaKnown RBP8.88□□□□□ -0.99
COPB1-209ENST00000533096 PRAF2O60831 178 aa8.88□□□□□ -0.99
COPB1-209ENST00000533096 SLC25A6P12236 298 aa8.88□□□□□ -0.99
COPB1-209ENST00000533096 LEPP41159 167 aa8.88□□□□□ -0.99
COPB1-209ENST00000533096 SELENOTP62341 195 aa8.88□□□□□ -0.99
COPB1-209ENST00000533096 SLC38A11Q08AI6 406 aa8.88□□□□□ -0.99
COPB1-209ENST00000533096 DAZ2Q13117 558 aaKnown RBP8.88□□□□□ -0.99
COPB1-209ENST00000533096 LYPD5Q6UWN5 251 aa8.88□□□□□ -0.99
COPB1-209ENST00000533096 LCN15Q6UWW0 184 aa8.88□□□□□ -0.99
COPB1-209ENST00000533096 NFE4Q86UQ8 179 aa8.88□□□□□ -0.99
COPB1-209ENST00000533096 NPVFQ9HCQ7 196 aa8.88□□□□□ -0.99
COPB1-209ENST00000533096 CCDC59Q9P031 241 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms