RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 AGMATQ9BSE5 352 aa6.88□□□□□ -1.31
CTNND1-225ENST00000530094 ERG28Q9UKR5 140 aa6.88□□□□□ -1.31
CTNND1-225ENST00000530094 TRAV5A0A0B4J249 113 aa6.87□□□□□ -1.31
CTNND1-225ENST00000530094 A0A1B0GV72 72 aa6.87□□□□□ -1.31
CTNND1-225ENST00000530094 A0A1W2PNU3 283 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-225ENST00000530094 FCN3O75636 299 aa6.87□□□□□ -1.31
CTNND1-225ENST00000530094 IGHV4-39P01824 125 aa6.87□□□□□ -1.31
CTNND1-225ENST00000530094 GFRA4Q9GZZ7 299 aa6.87□□□□□ -1.31
CTNND1-225ENST00000530094 WFDC1Q9HC57 220 aa6.87□□□□□ -1.31
CTNND1-225ENST00000530094 TRAV8-4A0A0B4J246 113 aa6.87□□□□□ -1.31
CTNND1-225ENST00000530094 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
CTNND1-225ENST00000530094 PPIFP30405 207 aaKnown RBP6.87□□□□□ -1.31
CTNND1-225ENST00000530094 SPATA31B1PQ5VZV4 182 aa6.87□□□□□ -1.31
CTNND1-225ENST00000530094 ZNF562Q6V9R5 426 aa6.87□□□□□ -1.31
CTNND1-225ENST00000530094 TRPT1Q86TN4 253 aaKnown RBP6.87□□□□□ -1.31
CTNND1-225ENST00000530094 ORAOV1Q8WV07 137 aa6.87□□□□□ -1.31
CTNND1-225ENST00000530094 IGHV2-70DA0A0C4DH43 119 aa6.87□□□□□ -1.31
CTNND1-225ENST00000530094 GFI1Q99684 422 aa6.87□□□□□ -1.31
CTNND1-225ENST00000530094 NOTCH2Q04721 2471 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 IGKV1D-8A0A087WSZ0 117 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 LGALS1P09382 135 aaKnown RBP6.86□□□□□ -1.31
CTNND1-225ENST00000530094 C10orf55Q5SWW7 151 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 LYZL1Q6UWQ5 148 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 SHANK2-AS3Q9BTD1 123 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 PKIGQ9Y2B9 76 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 LEPROTO15243 131 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 YPEL3P61236 119 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-225ENST00000530094 C1orf194Q5T5A4 169 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 IGF2-ASQ6U949 168 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 SCN8AQ9UQD0 1980 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 TRAV8-2A0A0B4J237 113 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 TMEM95Q3KNT9 176 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 C6orf226Q5I0X4 101 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 FAM215AQ9Y5M1 114 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 GFI1BQ5VTD9 330 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 Q71RC1 249 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-225ENST00000530094 DNAJC30Q96LL9 226 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 NHP2Q9NX24 153 aaKnown RBP6.86□□□□□ -1.31
CTNND1-225ENST00000530094 C5orf63A6NC05 138 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 A8MWV9 139 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 PAX4O43316 350 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 Q96MF0 132 aa6.86□□□□□ -1.31
CTNND1-225ENST00000530094 TRBV24-1A0A075B6N3 115 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 A0A1B0GV90 55 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 WISP1O95388 367 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 IGKV1-5P01602 117 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 IL17RELQ6ZVW7 336 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 EXOC3-AS1Q8N2X6 119 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 H0YIZ8 118 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 SNAI2O43623 268 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 CA1P00915 261 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-225ENST00000530094 ST6GALNAC6Q969X2 333 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 DENND4CQ5VZ89 1909 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 D6R8Y8 96 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 RNASE2P10153 161 aaKnown RBP6.85□□□□□ -1.31
CTNND1-225ENST00000530094 TMEM75Q8N9X5 138 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 WFDC12Q8WWY7 111 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 ACACBO00763 2458 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 DAD1P61803 113 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 CD300EQ496F6 205 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-225ENST00000530094 LYPD2Q6UXB3 125 aa6.85□□□□□ -1.31
CTNND1-225ENST00000530094 LSM4Q9Y4Z0 139 aaKnown RBP6.85□□□□□ -1.31
CTNND1-225ENST00000530094 HGFACQ04756 655 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 LY6G5BQ8NDX9 201 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 CSTL1Q9H114 145 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 GTF3C1Q12789 2109 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.84□□□□□ -1.319e-7■■■□□ 18
CTNND1-225ENST00000530094 H3BUT2 72 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 CADP27708 2225 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 MED13LQ71F56 2210 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 CREBBPQ92793 2442 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 H3BUA1 57 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 SYNJ2BPP57105 145 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 NDPQ00604 133 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 DOPEY2Q9Y3R5 2298 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 LINC00311Q8N616 119 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 KLF12Q9Y4X4 402 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 NCOR2Q9Y618 2525 aa6.84□□□□□ -1.31
CTNND1-225ENST00000530094 CACNA1AO00555 2505 aa6.84□□□□□ -1.32
CTNND1-225ENST00000530094 OVOL3O00110 214 aa6.84□□□□□ -1.32
CTNND1-225ENST00000530094 NDUFA4O00483 81 aa6.84□□□□□ -1.32
CTNND1-225ENST00000530094 CFHR2P36980 270 aa6.84□□□□□ -1.32
CTNND1-225ENST00000530094 ZNF329Q86UD4 541 aa6.84□□□□□ -1.32
CTNND1-225ENST00000530094 SLX1AQ9BQ83 275 aa6.84□□□□□ -1.32
CTNND1-225ENST00000530094 VSIRQ9H7M9 311 aa6.84□□□□□ -1.32
CTNND1-225ENST00000530094 ETV2O00321 342 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-225ENST00000530094 GRNP28799 593 aaKnown RBP6.83□□□□□ -1.32
CTNND1-225ENST00000530094 C1QL4Q86Z23 238 aa6.83□□□□□ -1.32
CTNND1-225ENST00000530094 ZNF492Q9P255 531 aa6.83□□□□□ -1.32
CTNND1-225ENST00000530094 TRAV3A0A0B4J244 114 aa6.83□□□□□ -1.32
CTNND1-225ENST00000530094 LINC00473A8K010 186 aa6.83□□□□□ -1.32
CTNND1-225ENST00000530094 LMO1P25800 156 aa6.83□□□□□ -1.32
CTNND1-225ENST00000530094 QRFPP83859 136 aa6.83□□□□□ -1.32
CTNND1-225ENST00000530094 SRSF2Q01130 221 aaKnown RBP6.83□□□□□ -1.32
CTNND1-225ENST00000530094 ZNF833PQ6ZTB9 187 aa6.83□□□□□ -1.32
CTNND1-225ENST00000530094 GATD1Q8NB37 220 aa6.83□□□□□ -1.32
CTNND1-225ENST00000530094 TMEM141Q96I45 108 aa6.83□□□□□ -1.32
CTNND1-225ENST00000530094 MRPL27Q9P0M9 148 aaKnown RBP6.83□□□□□ -1.32
CTNND1-225ENST00000530094 IGHV3-73A0A0B4J1V6 119 aa6.83□□□□□ -1.32
CTNND1-225ENST00000530094 IGHV3-53P01767 116 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms