RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 VAMP8Q9BV40 100 aa13.75□□□□□ -0.21
USH1C-205ENST00000527020 NTF3P20783 257 aa13.75□□□□□ -0.21
USH1C-205ENST00000527020 PSG3Q16557 428 aa13.75□□□□□ -0.21
USH1C-205ENST00000527020 ITLN2Q8WWU7 325 aaPredicted RBP13.75□□□□□ -0.21
USH1C-205ENST00000527020 PSG8Q9UQ74 426 aa13.75□□□□□ -0.21
USH1C-205ENST00000527020 EFNA4P52798 201 aa13.74□□□□□ -0.21
USH1C-205ENST00000527020 OR2T8A6NH00 312 aa13.73□□□□□ -0.21
USH1C-205ENST00000527020 CRIP1P50238 77 aa13.73□□□□□ -0.21
USH1C-205ENST00000527020 PRORYQ9H606 182 aa13.73□□□□□ -0.21
USH1C-205ENST00000527020 ZFP30Q9Y2G7 519 aa13.73□□□□□ -0.21
USH1C-205ENST00000527020 C19orf84I3L1E1 186 aa13.73□□□□□ -0.21
USH1C-205ENST00000527020 CTSGP08311 255 aa13.73□□□□□ -0.21
USH1C-205ENST00000527020 UQCRFS1P47985 274 aa13.73□□□□□ -0.21
USH1C-205ENST00000527020 FOXA3P55318 350 aaPredicted RBP13.73□□□□□ -0.21
USH1C-205ENST00000527020 LMO4P61968 165 aa13.73□□□□□ -0.21
USH1C-205ENST00000527020 RAB4AP20338 218 aa13.72□□□□□ -0.21
USH1C-205ENST00000527020 UBE2E1P51965 193 aa13.72□□□□□ -0.21
USH1C-205ENST00000527020 PDE6HQ13956 83 aa13.72□□□□□ -0.21
USH1C-205ENST00000527020 MIEN1Q9BRT3 115 aa13.72□□□□□ -0.21
USH1C-205ENST00000527020 AKAP6Q13023 2319 aa13.72□□□□□ -0.21
USH1C-205ENST00000527020 CTRLP40313 264 aa13.72□□□□□ -0.21
USH1C-205ENST00000527020 THYN1Q9P016 225 aa13.72□□□□□ -0.21
USH1C-205ENST00000527020 K7EQM0 130 aa13.71□□□□□ -0.21
USH1C-205ENST00000527020 HAX1O00165 279 aa13.71□□□□□ -0.21
USH1C-205ENST00000527020 HSBP1O75506 76 aa13.71□□□□□ -0.21
USH1C-205ENST00000527020 RNF224P0DH78 156 aa13.71□□□□□ -0.21
USH1C-205ENST00000527020 RNASEKQ6P5S7 137 aaKnown RBP13.71□□□□□ -0.21
USH1C-205ENST00000527020 BPESC1Q9GZL8 116 aa13.71□□□□□ -0.21
USH1C-205ENST00000527020 C1RLQ9NZP8 487 aa13.71□□□□□ -0.21
USH1C-205ENST00000527020 FAM106CPP0CH98 169 aa13.71□□□□□ -0.22
USH1C-205ENST00000527020 C8orf49Q96NF6 230 aa13.71□□□□□ -0.22
USH1C-205ENST00000527020 SH2D7A6NKC9 451 aaPredicted RBP13.7□□□□□ -0.22
USH1C-205ENST00000527020 SAA4P35542 130 aa13.7□□□□□ -0.22
USH1C-205ENST00000527020 EBLN2Q6P2I7 272 aa13.7□□□□□ -0.22
USH1C-205ENST00000527020 ZNF705AQ6ZN79 300 aaPredicted RBP13.7□□□□□ -0.22
USH1C-205ENST00000527020 S100A7AQ86SG5 101 aa13.7□□□□□ -0.22
USH1C-205ENST00000527020 BORCS7Q96B45 105 aa13.7□□□□□ -0.22
USH1C-205ENST00000527020 LOC102724200A0A096LPH7 203 aaPredicted RBP13.69□□□□□ -0.22
USH1C-205ENST00000527020 FAM181BA6NEQ2 426 aa13.69□□□□□ -0.22
USH1C-205ENST00000527020 M0QZ24 198 aa13.69□□□□□ -0.22
USH1C-205ENST00000527020 M0R143 59 aa13.69□□□□□ -0.22
USH1C-205ENST00000527020 M0R2Z0 102 aa13.69□□□□□ -0.22
USH1C-205ENST00000527020 SMAD5-AS1Q9Y6J3 95 aa13.69□□□□□ -0.22
USH1C-205ENST00000527020 ABCA2Q9BZC7 2435 aa13.69□□□□□ -0.22
USH1C-205ENST00000527020 SFTPCP11686 197 aa13.68□□□□□ -0.22
USH1C-205ENST00000527020 KLK9Q2XQG4 91 aa13.68□□□□□ -0.22
USH1C-205ENST00000527020 LCN12Q6JVE5 192 aa13.68□□□□□ -0.22
USH1C-205ENST00000527020 FAM110DQ8TAY7 271 aaPredicted RBP13.68□□□□□ -0.22
USH1C-205ENST00000527020 TXN2Q99757 166 aa13.68□□□□□ -0.22
USH1C-205ENST00000527020 AAMDCQ9H7C9 122 aa13.68□□□□□ -0.22
USH1C-205ENST00000527020 KLK9Q9UKQ9 250 aa13.68□□□□□ -0.22
USH1C-205ENST00000527020 C2orf70A6NJV1 201 aa13.68□□□□□ -0.22
USH1C-205ENST00000527020 ARMS2P0C7Q2 107 aa13.68□□□□□ -0.22
USH1C-205ENST00000527020 GNLYP22749 145 aa13.68□□□□□ -0.22
USH1C-205ENST00000527020 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
USH1C-205ENST00000527020 NDFIP1Q9BT67 221 aa13.68□□□□□ -0.22
USH1C-205ENST00000527020 ZFHX3Q15911 3703 aa13.67□□□□□ -0.22
USH1C-205ENST00000527020 A0A1B0GUT8 65 aa13.67□□□□□ -0.22
USH1C-205ENST00000527020 CHEK1O14757 476 aa13.67□□□□□ -0.22
USH1C-205ENST00000527020 ATP6V0E1O15342 81 aa13.67□□□□□ -0.22
USH1C-205ENST00000527020 ZNF502Q8TBZ5 544 aa13.67□□□□□ -0.22
USH1C-205ENST00000527020 RABAC1Q9UI14 185 aa13.67□□□□□ -0.22
USH1C-205ENST00000527020 CACNA1BQ00975 2339 aa13.67□□□□□ -0.22
USH1C-205ENST00000527020 IGHV3OR16-8A0A075B7F1 116 aa13.66□□□□□ -0.22
USH1C-205ENST00000527020 IGHG4P01861 327 aa13.66□□□□□ -0.22
USH1C-205ENST00000527020 RPL7P18124 248 aaKnown RBP13.66□□□□□ -0.22
USH1C-205ENST00000527020 NUTF2P61970 127 aaKnown RBP13.66□□□□□ -0.22
USH1C-205ENST00000527020 PSG9Q00887 426 aa13.66□□□□□ -0.22
USH1C-205ENST00000527020 SPATA45Q537H7 98 aa13.66□□□□□ -0.22
USH1C-205ENST00000527020 UNQ5815/PRO19632Q6UWF5 114 aa13.66□□□□□ -0.22
USH1C-205ENST00000527020 TMUB1Q9BVT8 246 aa13.66□□□□□ -0.22
USH1C-205ENST00000527020 IGKV2-40A0A087WW87 121 aaPredicted RBP13.66□□□□□ -0.22
USH1C-205ENST00000527020 IGHV3-35A0A0C4DH35 117 aa13.66□□□□□ -0.22
USH1C-205ENST00000527020 LINC01548A6NM66 108 aa13.66□□□□□ -0.22
USH1C-205ENST00000527020 IGKV2D-40P01614 121 aaPredicted RBP13.66□□□□□ -0.22
USH1C-205ENST00000527020 PMCHL1Q16048 86 aa13.66□□□□□ -0.22
USH1C-205ENST00000527020 ECSCRQ19T08 205 aa13.66□□□□□ -0.22
USH1C-205ENST00000527020 C15orf32Q32M92 178 aa13.66□□□□□ -0.22
USH1C-205ENST00000527020 SPATA12Q7Z6I5 190 aa13.66□□□□□ -0.22
USH1C-205ENST00000527020 GATD1Q8NB37 220 aa13.66□□□□□ -0.22
USH1C-205ENST00000527020 CLEC5AQ9NY25 188 aa13.65□□□□□ -0.22
USH1C-205ENST00000527020 VPS13CQ709C8 3753 aa13.65□□□□□ -0.22
USH1C-205ENST00000527020 CELSR1Q9NYQ6 3014 aa13.65□□□□□ -0.22
USH1C-205ENST00000527020 CENPVL3A0A0U1RRI6 287 aa13.65□□□□□ -0.22
USH1C-205ENST00000527020 SERTM2A0A1B0GWG4 89 aa13.65□□□□□ -0.22
USH1C-205ENST00000527020 GPR183P32249 361 aa13.65□□□□□ -0.22
USH1C-205ENST00000527020 CHCHD1Q96BP2 118 aaKnown RBP13.65□□□□□ -0.22
USH1C-205ENST00000527020 ZFAND3Q9H8U3 227 aa13.65□□□□□ -0.22
USH1C-205ENST00000527020 LPAR2Q9HBW0 351 aa13.65□□□□□ -0.22
USH1C-205ENST00000527020 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.64□□□□□ -0.23
USH1C-205ENST00000527020 NPFFO15130 113 aa13.64□□□□□ -0.23
USH1C-205ENST00000527020 HLA-DMBP28068 263 aa13.64□□□□□ -0.23
USH1C-205ENST00000527020 CSN1S1P47710 185 aa13.64□□□□□ -0.23
USH1C-205ENST00000527020 RHOGP84095 191 aa13.64□□□□□ -0.23
USH1C-205ENST00000527020 IGFL4Q6B9Z1 124 aa13.64□□□□□ -0.23
USH1C-205ENST00000527020 COX8CQ7Z4L0 72 aa13.64□□□□□ -0.23
USH1C-205ENST00000527020 MRPL52Q86TS9 123 aaKnown RBP13.64□□□□□ -0.23
USH1C-205ENST00000527020 ATOH7Q8N100 152 aa13.64□□□□□ -0.23
USH1C-205ENST00000527020 IGHV1-24A0A0C4DH33 117 aa13.64□□□□□ -0.23
USH1C-205ENST00000527020 G3V318 75 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms