RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 ATF4P18848 351 aaPredicted RBP13.07□□□□□ -0.32
TRIM60-203ENST00000508504 KRTAP10-11P60412 298 aa13.07□□□□□ -0.32
TRIM60-203ENST00000508504 CCL20P78556 96 aa13.07□□□□□ -0.32
TRIM60-203ENST00000508504 DPPA3Q6W0C5 159 aa13.07□□□□□ -0.32
TRIM60-203ENST00000508504 MBD3L1Q8WWY6 194 aa13.07□□□□□ -0.32
TRIM60-203ENST00000508504 NDUFB4O95168 129 aa13.06□□□□□ -0.32
TRIM60-203ENST00000508504 GCHFRP30047 84 aa13.06□□□□□ -0.32
TRIM60-203ENST00000508504 SAMD5Q5TGI4 173 aa13.06□□□□□ -0.32
TRIM60-203ENST00000508504 PQLC2Q6ZP29 291 aa13.06□□□□□ -0.32
TRIM60-203ENST00000508504 IQCF2Q8IXL9 164 aa13.06□□□□□ -0.32
TRIM60-203ENST00000508504 SAT2Q96F10 170 aaPredicted RBP13.06□□□□□ -0.32
TRIM60-203ENST00000508504 TRBV19A0A075B6N1 114 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 A0A087X0K7 114 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 TRAV8-2A0A0B4J237 113 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 TRAV25A0A0B4J276 109 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 CXorf1O96002 111 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 IFNA7P01567 189 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 NBEAP1P0C6P0 100 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 HIST1H1EP10412 219 aaKnown RBP13.05□□□□□ -0.32
TRIM60-203ENST00000508504 HLA-DMBP28068 263 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 LCN12Q6JVE5 192 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 SPAG8Q99932 426 aaPredicted RBP13.05□□□□□ -0.32
TRIM60-203ENST00000508504 K7EQG2 157 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 DNASE2O00115 360 aaPredicted RBP13.05□□□□□ -0.32
TRIM60-203ENST00000508504 CD5P06127 495 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 RNF182Q8N6D2 247 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 OR2K2Q8NGT1 345 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 UBQLN2Q9UHD9 624 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 RNF24Q9Y225 148 aa13.05□□□□□ -0.32
TRIM60-203ENST00000508504 CD7P09564 240 aa13.04□□□□□ -0.32
TRIM60-203ENST00000508504 DEFB1P60022 68 aa13.04□□□□□ -0.32
TRIM60-203ENST00000508504 C20orf173Q96LM9 149 aa13.04□□□□□ -0.32
TRIM60-203ENST00000508504 ZNF688P0C7X2 276 aa13.03□□□□□ -0.32
TRIM60-203ENST00000508504 EGFEM1PQ0D2K5 195 aa13.03□□□□□ -0.32
TRIM60-203ENST00000508504 BEAN1Q3B7T3 259 aa13.03□□□□□ -0.32
TRIM60-203ENST00000508504 EXOC3-AS1Q8N2X6 119 aa13.03□□□□□ -0.32
TRIM60-203ENST00000508504 ZNF331Q9NQX6 463 aaPredicted RBP13.03□□□□□ -0.32
TRIM60-203ENST00000508504 RANP62826 216 aaKnown RBP13.02□□□□□ -0.32
TRIM60-203ENST00000508504 PAFAH1B2P68402 229 aa13.02□□□□□ -0.32
TRIM60-203ENST00000508504 ZNF124Q15973 351 aa13.02□□□□□ -0.32
TRIM60-203ENST00000508504 SUN5Q8TC36 379 aa13.02□□□□□ -0.32
TRIM60-203ENST00000508504 C16orf92Q96LL3 132 aa13.02□□□□□ -0.32
TRIM60-203ENST00000508504 WFDC10AQ9H1F0 79 aa13.02□□□□□ -0.32
TRIM60-203ENST00000508504 AGRNO00468 2067 aa13.02□□□□□ -0.32
TRIM60-203ENST00000508504 NMBP08949 121 aa13.02□□□□□ -0.33
TRIM60-203ENST00000508504 UBE2G2P60604 165 aa13.02□□□□□ -0.33
TRIM60-203ENST00000508504 ODF3L2Q3SX64 289 aa13.02□□□□□ -0.33
TRIM60-203ENST00000508504 PRR25Q96S07 402 aa13.02□□□□□ -0.33
TRIM60-203ENST00000508504 TRAV1-1A0A0B4J248 108 aa13.01□□□□□ -0.33
TRIM60-203ENST00000508504 TEX46H3BTG2 121 aa13.01□□□□□ -0.33
TRIM60-203ENST00000508504 GUK1Q16774 197 aa13.01□□□□□ -0.33
TRIM60-203ENST00000508504 LRRC20Q8TCA0 184 aa13.01□□□□□ -0.33
TRIM60-203ENST00000508504 LINC00052Q96N35 136 aa13.01□□□□□ -0.33
TRIM60-203ENST00000508504 GPR61Q9BZJ8 451 aa13.01□□□□□ -0.33
TRIM60-203ENST00000508504 YTHDF2Q9Y5A9 579 aaKnown RBP13.01□□□□□ -0.33
TRIM60-203ENST00000508504 OR4C46A6NHA9 309 aa13□□□□□ -0.33
TRIM60-203ENST00000508504 ZNF705FA8MVS1 300 aaPredicted RBP13□□□□□ -0.33
TRIM60-203ENST00000508504 M0R3E3 92 aa13□□□□□ -0.33
TRIM60-203ENST00000508504 PRB2P02812 416 aaPredicted RBP13□□□□□ -0.33
TRIM60-203ENST00000508504 PSMG4Q5JS54 123 aa13□□□□□ -0.33
TRIM60-203ENST00000508504 LYPD6BQ8NI32 183 aa13□□□□□ -0.33
TRIM60-203ENST00000508504 C19orf73Q9NVV2 129 aa13□□□□□ -0.33
TRIM60-203ENST00000508504 ISLRO14498 428 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 MEOX2P50222 304 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 CD81P60033 236 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 BLOC1S1P78537 153 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 PDE6HQ13956 83 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 APRG1Q8IVJ8 170 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 Q9H3A6 140 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 MAP6D1Q9H9H5 199 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 TMEM167BQ9NRX6 74 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 MEGF8Q7Z7M0 2845 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 TRAV2A0A0B4J234 112 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 GGTLC3B5MD39 225 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 DEFB131AP59861 70 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 ICAM4Q14773 271 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 GNG13Q9P2W3 67 aa12.99□□□□□ -0.33
TRIM60-203ENST00000508504 FAM74A7A6NL05 159 aa12.98□□□□□ -0.33
TRIM60-203ENST00000508504 F6UB75 175 aa12.98□□□□□ -0.33
TRIM60-203ENST00000508504 ZNF253O75346 499 aa12.98□□□□□ -0.33
TRIM60-203ENST00000508504 PSMB3P49720 205 aa12.98□□□□□ -0.33
TRIM60-203ENST00000508504 ZNF767PQ75MW2 155 aa12.98□□□□□ -0.33
TRIM60-203ENST00000508504 PRAC2D3DTV9 90 aa12.97□□□□□ -0.33
TRIM60-203ENST00000508504 PAGE4O60829 102 aa12.97□□□□□ -0.33
TRIM60-203ENST00000508504 SNRPD3P62318 126 aaKnown RBP12.97□□□□□ -0.33
TRIM60-203ENST00000508504 GDF5OSQ5U4N7 250 aa12.97□□□□□ -0.33
TRIM60-203ENST00000508504 Q8N1Y9 231 aa12.97□□□□□ -0.33
TRIM60-203ENST00000508504 SLC50A1Q9BRV3 221 aa12.97□□□□□ -0.33
TRIM60-203ENST00000508504 PGPA6NDG6 321 aa12.96□□□□□ -0.33
TRIM60-203ENST00000508504 HBE1P02100 147 aa12.96□□□□□ -0.33
TRIM60-203ENST00000508504 ZNF705DP0CH99 300 aaPredicted RBP12.96□□□□□ -0.33
TRIM60-203ENST00000508504 ZNF705BP0CI00 300 aaPredicted RBP12.96□□□□□ -0.33
TRIM60-203ENST00000508504 ATP5G3P48201 142 aa12.96□□□□□ -0.33
TRIM60-203ENST00000508504 KPRPQ5T749 579 aaPredicted RBP12.96□□□□□ -0.33
TRIM60-203ENST00000508504 CITED4Q96RK1 184 aa12.96□□□□□ -0.33
TRIM60-203ENST00000508504 ID1P41134 155 aa12.96□□□□□ -0.34
TRIM60-203ENST00000508504 SUMO1P63165 101 aaKnown RBP12.96□□□□□ -0.34
TRIM60-203ENST00000508504 PSG9Q00887 426 aa12.96□□□□□ -0.34
TRIM60-203ENST00000508504 PSG3Q16557 428 aa12.96□□□□□ -0.34
TRIM60-203ENST00000508504 DEFB125Q8N687 156 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms