RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 VWC2LB2RUY7 222 aa5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 AMTNQ6UX39 209 aa5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 C2orf66Q6UXQ4 117 aa5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 C5orf24Q7Z6I8 188 aa5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 GGNQ86UU5 652 aa5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 CD177Q8N6Q3 437 aa5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 TDRD6O60522 2096 aaKnown RBP5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 TRAV26-1A0A087WT03 109 aa5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 A0A087WX48 190 aa5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 IGKV3-20P01619 116 aa5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 PRADC1Q9BSG0 188 aa5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 THSD7AQ9UPZ6 1657 aa5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 IGHV3OR16-12A0A075B7B8 117 aa5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 C10orf55Q5SWW7 151 aa5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 GATD1Q8NB37 220 aa5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 MRPL35Q9NZE8 188 aaKnown RBP5.93□□□□□ -1.46
UBE2D3-224ENST00000508474 K7EMI3 77 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 ETV2O00321 342 aaPredicted RBP5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 MYOD1P15172 320 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 LMO1P25800 156 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 PLAURQ03405 335 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 TEN1Q86WV5 123 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 RP1P56715 2156 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 LINC00158P58513 81 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 NTN5Q8WTR8 489 aaPredicted RBP5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 TSC2P49815 1807 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 MPDZO75970 2070 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 IGKV3D-20A0A0C4DH25 116 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 PRR20EP86478 221 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 PRR20CP86479 221 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 PRR20DP86480 221 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 PRR20BP86481 221 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 PRR20AP86496 221 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 ZNF876PQ49A33 203 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 COLCA1Q6ZS62 124 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 DEFB124Q8NES8 71 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 SBF1O95248 1867 aa5.92□□□□□ -1.46
UBE2D3-224ENST00000508474 TRBV19A0A075B6N1 114 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 LTAP01374 205 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 TFF1P04155 84 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 SRD5A1P18405 259 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 NPC2P61916 151 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 RBX1P62877 108 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 SH2D6Q7Z4S9 175 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 C14orf178Q8N769 122 aaPredicted RBP5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 CARD19Q96LW7 228 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 CACNA1IQ9P0X4 2223 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 PTPRDP23468 1912 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 IGHV3OR16-8A0A075B7F1 116 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 E9PLN8 166 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 IGLV3-1P01715 115 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 FOXI1Q12951 378 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 Q8TAT8 98 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 NEU4Q8WWR8 484 aaPredicted RBP5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 ZSWIM8A7E2V4 1837 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 ADARB2-AS1A8MUL3 147 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 TMEM258P61165 79 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 ARTNQ5T4W7 220 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 WFDC12Q8WWY7 111 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 LINC01587Q99440 93 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 NDUFA4L2Q9NRX3 87 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 TRBV25-1A0A075B6N4 114 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 PRSS47A8MTI9 375 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 OOSP1A8MZH6 123 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 CFC1BP0CG36 223 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 CFC1P0CG37 223 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 PAX8Q06710 450 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 DKK2Q9UBU2 259 aa5.91□□□□□ -1.46
UBE2D3-224ENST00000508474 IGHV1-18A0A0C4DH31 117 aa5.9□□□□□ -1.46
UBE2D3-224ENST00000508474 TRPT1Q86TN4 253 aaKnown RBP5.9□□□□□ -1.46
UBE2D3-224ENST00000508474 C20orf78Q9BR46 151 aa5.9□□□□□ -1.46
UBE2D3-224ENST00000508474 TP53TG1Q9Y2A0 90 aa5.9□□□□□ -1.46
UBE2D3-224ENST00000508474 COX6B1P14854 86 aa5.9□□□□□ -1.46
UBE2D3-224ENST00000508474 CD24P25063 80 aa5.9□□□□□ -1.46
UBE2D3-224ENST00000508474 UBL5Q9BZL1 73 aa5.9□□□□□ -1.46
UBE2D3-224ENST00000508474 IGHV1-3A0A0C4DH29 117 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 A0A0U1RRA0 63 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 PATE3B3GLJ2 98 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 C9orf172C9J069 976 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 TIMM23O14925 209 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 PAX4O43316 350 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 ZNF474Q6S9Z5 364 aaPredicted RBP5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 PCP2Q8IVA1 136 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 THAP8Q8NA92 274 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 FXYD5Q96DB9 178 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 LAMTOR3Q9UHA4 124 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 SIGLEC9Q9Y336 463 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 UNC13CQ8NB66 2214 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 DENND4AQ7Z401 1863 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 ATG2BQ96BY7 2078 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 NDUFB8O95169 186 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 IGHV1-8P0DP01 117 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 MLANAQ16655 118 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 SPXQ9BT56 116 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 SMIM2Q9BVW6 85 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 METRNQ9UJH8 293 aa5.9□□□□□ -1.47
UBE2D3-224ENST00000508474 PLXNA3P51805 1871 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 PRSS29PA6NIE9 313 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 K7EM74 188 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 ATOX1O00244 68 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms