RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 RFX7Q2KHR2 1363 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 A0A087WSZ3 146 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 TRAV27A0A087WT01 109 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 LYRM1O43325 122 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 PPP1R2P41236 205 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 FXYD6P3P58550 94 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 KLRD1Q13241 179 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 POU6F1Q14863 301 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 SNCBQ16143 134 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 AKR1C8PQ5T2L2 129 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 HACD4Q5VWC8 232 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 PATE2Q6UY27 113 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 HYLS1Q96M11 299 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 GINS3Q9BRX5 216 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 CACYBPQ9HB71 228 aaKnown RBP0.5□□□□□ -2.33
PSPC1-205ENST00000497722 LYRM2Q9NU23 88 aaPredicted RBP0.5□□□□□ -2.33
PSPC1-205ENST00000497722 HSPB8Q9UJY1 196 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 STOML2Q9UJZ1 356 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 SSR3Q9UNL2 185 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 CHD3Q12873 2000 aaKnown RBP0.5□□□□□ -2.33
PSPC1-205ENST00000497722 ZFC3H1O60293 1989 aaKnown RBP0.5□□□□□ -2.33
PSPC1-205ENST00000497722 MYH3P11055 1940 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 SIP14410 1827 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 COL24A1Q17RW2 1714 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 SYNMO15061 1565 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 CECR2Q9BXF3 1484 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 ROCK1Q13464 1354 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 RIIAD1A6NNX1 92 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 H7C1C5 153 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 RER1O15258 196 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 IFNA1P01562 189 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 IGLV1-51P01701 117 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 CRHP06850 196 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 PHBP35232 272 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 LCN6P62502 163 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 GNG5P63218 68 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 RPL19P84098 196 aaKnown RBP0.49□□□□□ -2.33
PSPC1-205ENST00000497722 GRINAQ7Z429 371 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 ARPINQ7Z6K5 226 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 TMED4Q7Z7H5 227 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 NUP35Q8NFH5 326 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 CDC26Q8NHZ8 85 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 AP3S1Q92572 193 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 LYSMD1Q96S90 227 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 PRRT1Q99946 306 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 IL20Q9NYY1 176 aa0.49□□□□□ -2.33
PSPC1-205ENST00000497722 BOKQ9UMX3 212 aaPredicted RBP0.49□□□□□ -2.33
PSPC1-205ENST00000497722 N4BP2Q86UW6 1770 aaPredicted RBP0.49□□□□□ -2.33
PSPC1-205ENST00000497722 PHRF1Q9P1Y6 1649 aaKnown RBP0.49□□□□□ -2.33
PSPC1-205ENST00000497722 TRAV5A0A0B4J249 113 aa0.48□□□□□ -2.33
PSPC1-205ENST00000497722 TRBV30A0A0K0K1B3 111 aa0.48□□□□□ -2.33
PSPC1-205ENST00000497722 hDV103S1A0JD37 113 aa0.48□□□□□ -2.33
PSPC1-205ENST00000497722 B4DSR2 109 aa0.48□□□□□ -2.33
PSPC1-205ENST00000497722 TMEM238C9JI98 176 aa0.48□□□□□ -2.33
PSPC1-205ENST00000497722 OGNP20774 298 aaKnown RBP0.48□□□□□ -2.33
PSPC1-205ENST00000497722 INSL3P51460 131 aa0.48□□□□□ -2.33
PSPC1-205ENST00000497722 ARPP19P56211 112 aa0.48□□□□□ -2.33
PSPC1-205ENST00000497722 BASP1P80723 227 aaKnown RBP0.48□□□□□ -2.33
PSPC1-205ENST00000497722 Q6ZS92 163 aa0.48□□□□□ -2.33
PSPC1-205ENST00000497722 ZC2HC1AQ96GY0 325 aa0.48□□□□□ -2.33
PSPC1-205ENST00000497722 PAIP2Q9BPZ3 127 aaKnown RBP0.48□□□□□ -2.33
PSPC1-205ENST00000497722 BOLA2Q9H3K6 86 aa0.48□□□□□ -2.33
PSPC1-205ENST00000497722 MYO5AQ9Y4I1 1855 aaKnown RBP0.48□□□□□ -2.33
PSPC1-205ENST00000497722 YTHDC2Q9H6S0 1430 aaKnown RBP0.47□□□□□ -2.33
PSPC1-205ENST00000497722 MFSD11O43934 449 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 HIST1H2BKO60814 126 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 TRGC2P03986 189 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 HIST1H2BJP06899 126 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 CXCL1P09341 107 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 SPINT3P49223 89 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 GNG3P63215 75 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 EIF3IQ13347 325 aaKnown RBP0.47□□□□□ -2.33
PSPC1-205ENST00000497722 PHF5AQ7RTV0 110 aaKnown RBP0.47□□□□□ -2.33
PSPC1-205ENST00000497722 Q86TA4 180 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 OR13C6PQ8NH95 151 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 NEK7Q8TDX7 302 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 PLEKHB2Q96CS7 222 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 MALSU1Q96EH3 234 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 GPX7Q96SL4 187 aaPredicted RBP0.47□□□□□ -2.33
PSPC1-205ENST00000497722 CCDC94Q9BW85 323 aaPredicted RBP0.47□□□□□ -2.33
PSPC1-205ENST00000497722 RTL8AQ9BWD3 113 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 C10orf95Q9H7T3 257 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 SS18L2Q9UHA2 77 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 ASB4Q9Y574 426 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 ANKRD31Q8N7Z5 1873 aa0.47□□□□□ -2.33
PSPC1-205ENST00000497722 MGAMO43451 1857 aa0.46□□□□□ -2.34
PSPC1-205ENST00000497722 MYO18AQ92614 2054 aaKnown RBP0.46□□□□□ -2.34
PSPC1-205ENST00000497722 ZNF727A8MUV8 499 aa0.46□□□□□ -2.34
PSPC1-205ENST00000497722 GPR31O00270 319 aa0.46□□□□□ -2.34
PSPC1-205ENST00000497722 CSN2P05814 226 aa0.46□□□□□ -2.34
PSPC1-205ENST00000497722 VMA21Q3ZAQ7 101 aa0.46□□□□□ -2.34
PSPC1-205ENST00000497722 C6orf52Q5T4I8 152 aa0.46□□□□□ -2.34
PSPC1-205ENST00000497722 TMEM14EPQ6UXP3 125 aa0.46□□□□□ -2.34
PSPC1-205ENST00000497722 SMIM20Q8N5G0 67 aa0.46□□□□□ -2.34
PSPC1-205ENST00000497722 HOPXQ9BPY8 73 aaPredicted RBP0.46□□□□□ -2.34
PSPC1-205ENST00000497722 PTPRFP10586 1907 aa0.46□□□□□ -2.34
PSPC1-205ENST00000497722 ASCC3Q8N3C0 2202 aaKnown RBP0.45□□□□□ -2.34
PSPC1-205ENST00000497722 ODAMA1E959 279 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 C9orf170A2RU37 121 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 E5RI56 91 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms