RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ZNF562Q6V9R5 426 aa15.51■□□□□ 0.07
COL27A1-207ENST00000494090 SYS1-DBNDD2H3BUS1 97 aa15.5■□□□□ 0.07
COL27A1-207ENST00000494090 SFTA2Q6UW10 78 aa15.5■□□□□ 0.07
COL27A1-207ENST00000494090 PTPRDP23468 1912 aa15.5■□□□□ 0.07
COL27A1-207ENST00000494090 NDUFB8O95169 186 aa15.5■□□□□ 0.07
COL27A1-207ENST00000494090 RPL35AP18077 110 aaKnown RBP15.5■□□□□ 0.07
COL27A1-207ENST00000494090 NDPQ00604 133 aa15.5■□□□□ 0.07
COL27A1-207ENST00000494090 ERCC8Q13216 396 aa15.5■□□□□ 0.07
COL27A1-207ENST00000494090 IGFL3Q6UXB1 125 aa15.5■□□□□ 0.07
COL27A1-207ENST00000494090 Q8TCH9 128 aa15.5■□□□□ 0.07
COL27A1-207ENST00000494090 PAX9P55771 341 aa15.5■□□□□ 0.07
COL27A1-207ENST00000494090 GUSBP1Q15486 140 aa15.5■□□□□ 0.07
COL27A1-207ENST00000494090 Q86TA4 180 aa15.5■□□□□ 0.07
COL27A1-207ENST00000494090 SHANK2-AS3Q9BTD1 123 aa15.5■□□□□ 0.07
COL27A1-207ENST00000494090 DEFB121Q5J5C9 76 aa15.49■□□□□ 0.07
COL27A1-207ENST00000494090 FAM110DQ8TAY7 271 aaPredicted RBP15.49■□□□□ 0.07
COL27A1-207ENST00000494090 ZNF124Q15973 351 aa15.49■□□□□ 0.07
COL27A1-207ENST00000494090 PROK2Q9HC23 129 aa15.49■□□□□ 0.07
COL27A1-207ENST00000494090 TMEM14BQ9NUH8 114 aa15.49■□□□□ 0.07
COL27A1-207ENST00000494090 TRAV8-1A0A0A6YYK1 113 aa15.49■□□□□ 0.07
COL27A1-207ENST00000494090 PRR31Q5SQ13 230 aa15.49■□□□□ 0.07
COL27A1-207ENST00000494090 DMRTC2Q8IXT2 367 aaPredicted RBP15.49■□□□□ 0.07
COL27A1-207ENST00000494090 WISP1O95388 367 aa15.49■□□□□ 0.07
COL27A1-207ENST00000494090 OVOL2Q9BRP0 275 aa15.49■□□□□ 0.07
COL27A1-207ENST00000494090 PLXNA4Q9HCM2 1894 aa15.49■□□□□ 0.07
COL27A1-207ENST00000494090 GATA4P43694 442 aa15.48■□□□□ 0.07
COL27A1-207ENST00000494090 Q0VG73 95 aa15.48■□□□□ 0.07
COL27A1-207ENST00000494090 ZNF664Q8N3J9 261 aa15.48■□□□□ 0.07
COL27A1-207ENST00000494090 Q8TAT8 98 aa15.48■□□□□ 0.07
COL27A1-207ENST00000494090 hDV102S1A0JD36 115 aa15.48■□□□□ 0.07
COL27A1-207ENST00000494090 SP5Q6BEB4 398 aaPredicted RBP15.48■□□□□ 0.07
COL27A1-207ENST00000494090 C3orf56Q8N813 242 aa15.48■□□□□ 0.07
COL27A1-207ENST00000494090 LRRK1Q38SD2 2015 aa15.48■□□□□ 0.07
COL27A1-207ENST00000494090 PAX4O43316 350 aa15.48■□□□□ 0.07
COL27A1-207ENST00000494090 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.47■□□□□ 0.07
COL27A1-207ENST00000494090 DLEU1O43261 78 aa15.47■□□□□ 0.07
COL27A1-207ENST00000494090 PFN1P07737 140 aaKnown RBP15.47■□□□□ 0.07
COL27A1-207ENST00000494090 ZNF524Q96C55 264 aa15.47■□□□□ 0.07
COL27A1-207ENST00000494090 WDR81Q562E7 1941 aa15.47■□□□□ 0.07
COL27A1-207ENST00000494090 NLRC5Q86WI3 1866 aa15.47■□□□□ 0.07
COL27A1-207ENST00000494090 RHODO00212 210 aa15.47■□□□□ 0.07
COL27A1-207ENST00000494090 PSCAO43653 123 aa15.47■□□□□ 0.07
COL27A1-207ENST00000494090 A0A1W2PPI3 338 aa15.47■□□□□ 0.07
COL27A1-207ENST00000494090 BCL6BQ8N143 479 aaPredicted RBP15.47■□□□□ 0.07
COL27A1-207ENST00000494090 LSM4Q9Y4Z0 139 aaKnown RBP15.47■□□□□ 0.07
COL27A1-207ENST00000494090 TRAV8-4A0A0B4J246 113 aa15.46■□□□□ 0.07
COL27A1-207ENST00000494090 TMEM249Q2WGJ8 235 aa15.46■□□□□ 0.07
COL27A1-207ENST00000494090 GAGE13Q4V321 117 aa15.46■□□□□ 0.07
COL27A1-207ENST00000494090 OVOL3O00110 214 aa15.46■□□□□ 0.07
COL27A1-207ENST00000494090 CSTL1Q9H114 145 aa15.46■□□□□ 0.07
COL27A1-207ENST00000494090 A0A0U1RRA0 63 aa15.46■□□□□ 0.07
COL27A1-207ENST00000494090 YPEL3P61236 119 aaPredicted RBP15.46■□□□□ 0.07
COL27A1-207ENST00000494090 C6orf226Q5I0X4 101 aa15.46■□□□□ 0.07
COL27A1-207ENST00000494090 C10orf91Q5T1B1 145 aa15.46■□□□□ 0.07
COL27A1-207ENST00000494090 LIME1Q9H400 295 aa15.46■□□□□ 0.07
COL27A1-207ENST00000494090 ZNF492Q9P255 531 aa15.46■□□□□ 0.06
COL27A1-207ENST00000494090 PHF3Q92576 2039 aaKnown RBP15.45■□□□□ 0.06
COL27A1-207ENST00000494090 IGHV3-73A0A0B4J1V6 119 aa15.45■□□□□ 0.06
COL27A1-207ENST00000494090 SS18Q15532 418 aa15.45■□□□□ 0.06
COL27A1-207ENST00000494090 ACACAQ13085 2346 aa15.45■□□□□ 0.06
COL27A1-207ENST00000494090 IGHV3-64A0A075B6Q5 118 aa15.45■□□□□ 0.06
COL27A1-207ENST00000494090 MYMXA0A1B0GTQ4 84 aa15.45■□□□□ 0.06
COL27A1-207ENST00000494090 LINC00479Q96M42 142 aa15.45■□□□□ 0.06
COL27A1-207ENST00000494090 LY6G6EA0A0G2JKS1 128 aa15.45■□□□□ 0.06
COL27A1-207ENST00000494090 U3KQA8 63 aa15.45■□□□□ 0.06
COL27A1-207ENST00000494090 IGHV1-69DA0A0B4J2H0 117 aa15.44■□□□□ 0.06
COL27A1-207ENST00000494090 IGHV1-69P01742 117 aa15.44■□□□□ 0.06
COL27A1-207ENST00000494090 NDUFA4L2Q9NRX3 87 aa15.44■□□□□ 0.06
COL27A1-207ENST00000494090 J3QLI3 93 aa15.44■□□□□ 0.06
COL27A1-207ENST00000494090 C14orf178Q8N769 122 aaPredicted RBP15.44■□□□□ 0.06
COL27A1-207ENST00000494090 SYNJ2BPP57105 145 aa15.44■□□□□ 0.06
COL27A1-207ENST00000494090 C1orf159Q96HA4 380 aa15.44■□□□□ 0.06
COL27A1-207ENST00000494090 SIGMAR1Q99720 223 aa15.44■□□□□ 0.06
COL27A1-207ENST00000494090 F8WEM9 126 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 IGKV1-39P01597 117 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 IGKV1D-39P04432 117 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 FXYD7P58549 80 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 Q5PR19 223 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 LY6G5BQ8NDX9 201 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 FAM231BA6NCW3 169 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 IGHV3-53P01767 116 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 MPV17L2Q567V2 206 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 RNF223E7ERA6 249 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 TRPT1Q86TN4 253 aaKnown RBP15.43■□□□□ 0.06
COL27A1-207ENST00000494090 UBE2E2Q96LR5 201 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 CDK2AP2O75956 126 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 AMN1Q8IY45 258 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 TMEM75Q8N9X5 138 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 TMEM158Q8WZ71 300 aa15.43■□□□□ 0.06
COL27A1-207ENST00000494090 RSPO1Q2MKA7 263 aaPredicted RBP15.42■□□□□ 0.06
COL27A1-207ENST00000494090 A0A087X0K7 114 aa15.42■□□□□ 0.06
COL27A1-207ENST00000494090 LGALS1P09382 135 aaKnown RBP15.42■□□□□ 0.06
COL27A1-207ENST00000494090 ZNF726P1Q15940 193 aa15.42■□□□□ 0.06
COL27A1-207ENST00000494090 IGFL4Q6B9Z1 124 aa15.42■□□□□ 0.06
COL27A1-207ENST00000494090 Q6ZR03 302 aa15.42■□□□□ 0.06
COL27A1-207ENST00000494090 GATD1Q8NB37 220 aa15.42■□□□□ 0.06
COL27A1-207ENST00000494090 ZNF833PQ6ZTB9 187 aa15.42■□□□□ 0.06
COL27A1-207ENST00000494090 LINC01619G3V211 115 aa15.42■□□□□ 0.06
COL27A1-207ENST00000494090 DEFB131AP59861 70 aa15.42■□□□□ 0.06
COL27A1-207ENST00000494090 CT83Q5H943 113 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 245.3 ms