RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 K7EQM0 130 aa12.67□□□□□ -0.38
SEMA4D-220ENST00000492386 FCGR2BP31994 310 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-220ENST00000492386 FOXC1Q12948 553 aa12.67□□□□□ -0.38
SEMA4D-220ENST00000492386 GATD1Q8NB37 220 aa12.67□□□□□ -0.38
SEMA4D-220ENST00000492386 PTPRQQ9UMZ3 2332 aa12.67□□□□□ -0.38
SEMA4D-220ENST00000492386 ODF3BA8MYP8 253 aa12.67□□□□□ -0.38
SEMA4D-220ENST00000492386 M0R3E3 92 aa12.67□□□□□ -0.38
SEMA4D-220ENST00000492386 FANCD2OSQ96PS1 177 aa12.67□□□□□ -0.38
SEMA4D-220ENST00000492386 RAB1BQ9H0U4 201 aa12.67□□□□□ -0.38
SEMA4D-220ENST00000492386 IGLV11-55A0A075B6I3 123 aa12.66□□□□□ -0.38
SEMA4D-220ENST00000492386 CEACAM3P40198 252 aa12.66□□□□□ -0.38
SEMA4D-220ENST00000492386 HINT1P49773 126 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-220ENST00000492386 C5orf64Q2M2E5 130 aa12.66□□□□□ -0.38
SEMA4D-220ENST00000492386 GNG7O60262 68 aa12.66□□□□□ -0.38
SEMA4D-220ENST00000492386 OR5AL1P0C617 328 aa12.66□□□□□ -0.38
SEMA4D-220ENST00000492386 RIGQ13278 110 aa12.66□□□□□ -0.38
SEMA4D-220ENST00000492386 DMRTA1Q5VZB9 504 aa12.66□□□□□ -0.38
SEMA4D-220ENST00000492386 F8W735 103 aaPredicted RBP12.65□□□□□ -0.38
SEMA4D-220ENST00000492386 CDSNQ15517 529 aa12.65□□□□□ -0.38
SEMA4D-220ENST00000492386 TMUB1Q9BVT8 246 aa12.65□□□□□ -0.38
SEMA4D-220ENST00000492386 TRAV30A0A087WSZ9 112 aa12.65□□□□□ -0.38
SEMA4D-220ENST00000492386 NPIPB5A8MRT5 1133 aa12.65□□□□□ -0.38
SEMA4D-220ENST00000492386 M0R1W7 72 aa12.65□□□□□ -0.38
SEMA4D-220ENST00000492386 HES1Q14469 280 aa12.65□□□□□ -0.38
SEMA4D-220ENST00000492386 ZNF48Q96MX3 618 aaPredicted RBP12.65□□□□□ -0.38
SEMA4D-220ENST00000492386 C8orf49Q96NF6 230 aa12.65□□□□□ -0.38
SEMA4D-220ENST00000492386 PDE6HQ13956 83 aa12.64□□□□□ -0.39
SEMA4D-220ENST00000492386 NEU4Q8WWR8 484 aaPredicted RBP12.64□□□□□ -0.39
SEMA4D-220ENST00000492386 ST20Q9HBF5 79 aa12.64□□□□□ -0.39
SEMA4D-220ENST00000492386 TP73-AS1Q9UF72 201 aa12.64□□□□□ -0.39
SEMA4D-220ENST00000492386 A0A1W2PRD5 423 aa12.64□□□□□ -0.39
SEMA4D-220ENST00000492386 A0A1W2PRF3 423 aa12.64□□□□□ -0.39
SEMA4D-220ENST00000492386 A0A1W2PRM7 423 aa12.64□□□□□ -0.39
SEMA4D-220ENST00000492386 hDV102S1A0JD36 115 aa12.64□□□□□ -0.39
SEMA4D-220ENST00000492386 PRTN3P24158 256 aa12.64□□□□□ -0.39
SEMA4D-220ENST00000492386 MFAP4P55083 255 aa12.64□□□□□ -0.39
SEMA4D-220ENST00000492386 NDPQ00604 133 aa12.64□□□□□ -0.39
SEMA4D-220ENST00000492386 PTPRZ1P23471 2315 aaPredicted RBP12.64□□□□□ -0.39
SEMA4D-220ENST00000492386 HRNRQ86YZ3 2850 aaPredicted RBP12.63□□□□□ -0.39
SEMA4D-220ENST00000492386 LOC105371242A0A075B767 164 aa12.63□□□□□ -0.39
SEMA4D-220ENST00000492386 A0A1B0GW15 77 aa12.63□□□□□ -0.39
SEMA4D-220ENST00000492386 CSN3P07498 182 aa12.63□□□□□ -0.39
SEMA4D-220ENST00000492386 ZNF562Q6V9R5 426 aa12.63□□□□□ -0.39
SEMA4D-220ENST00000492386 ARPC1AQ92747 370 aa12.63□□□□□ -0.39
SEMA4D-220ENST00000492386 TIMD4Q96H15 378 aa12.63□□□□□ -0.39
SEMA4D-220ENST00000492386 CCL21O00585 134 aa12.63□□□□□ -0.39
SEMA4D-220ENST00000492386 Q6AWC8 147 aa12.63□□□□□ -0.39
SEMA4D-220ENST00000492386 PET117Q6UWS5 81 aa12.62□□□□□ -0.39
SEMA4D-220ENST00000492386 DYNAPQ8N1N2 210 aa12.62□□□□□ -0.39
SEMA4D-220ENST00000492386 TTC9CQ8N5M4 171 aa12.62□□□□□ -0.39
SEMA4D-220ENST00000492386 ORAOV1Q8WV07 137 aa12.62□□□□□ -0.39
SEMA4D-220ENST00000492386 MAP1LC3CQ9BXW4 147 aa12.62□□□□□ -0.39
SEMA4D-220ENST00000492386 TMEM191AQ9H0A3 160 aa12.62□□□□□ -0.39
SEMA4D-220ENST00000492386 AAMDCQ9H7C9 122 aa12.62□□□□□ -0.39
SEMA4D-220ENST00000492386 UNQ5815/PRO19632Q6UWF5 114 aa12.62□□□□□ -0.39
SEMA4D-220ENST00000492386 S100A7AQ86SG5 101 aa12.62□□□□□ -0.39
SEMA4D-220ENST00000492386 C11orf71Q6IPW1 123 aa12.61□□□□□ -0.39
SEMA4D-220ENST00000492386 ZNF493Q6ZR52 646 aa12.61□□□□□ -0.39
SEMA4D-220ENST00000492386 Q6ZVH6 145 aa12.61□□□□□ -0.39
SEMA4D-220ENST00000492386 Q8N6K4 173 aa12.61□□□□□ -0.39
SEMA4D-220ENST00000492386 MCRIP2Q9BUT9 160 aaKnown RBP12.61□□□□□ -0.39
SEMA4D-220ENST00000492386 TPPP3Q9BW30 176 aa12.61□□□□□ -0.39
SEMA4D-220ENST00000492386 C21orf62Q9NYP8 219 aa12.61□□□□□ -0.39
SEMA4D-220ENST00000492386 HSPB8Q9UJY1 196 aa12.61□□□□□ -0.39
SEMA4D-220ENST00000492386 CT45A10P0DMU9 189 aa12.61□□□□□ -0.39
SEMA4D-220ENST00000492386 AP5S1Q9NUS5 200 aa12.61□□□□□ -0.39
SEMA4D-220ENST00000492386 ADORA2A-AS1P86434 159 aa12.6□□□□□ -0.39
SEMA4D-220ENST00000492386 NCBP2LA6PVI3 153 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-220ENST00000492386 IGHV3-23P01764 117 aa12.59□□□□□ -0.39
SEMA4D-220ENST00000492386 VMO1Q7Z5L0 202 aa12.59□□□□□ -0.39
SEMA4D-220ENST00000492386 SERTM2A0A1B0GWG4 89 aa12.59□□□□□ -0.39
SEMA4D-220ENST00000492386 SH2D1AO60880 128 aa12.59□□□□□ -0.39
SEMA4D-220ENST00000492386 CSN1S1P47710 185 aa12.59□□□□□ -0.39
SEMA4D-220ENST00000492386 PSG9Q00887 426 aa12.59□□□□□ -0.39
SEMA4D-220ENST00000492386 LINC01545Q5VT33 79 aa12.59□□□□□ -0.39
SEMA4D-220ENST00000492386 LYZL1Q6UWQ5 148 aa12.59□□□□□ -0.39
SEMA4D-220ENST00000492386 COX8CQ7Z4L0 72 aa12.59□□□□□ -0.39
SEMA4D-220ENST00000492386 COX11Q9Y6N1 276 aa12.59□□□□□ -0.39
SEMA4D-220ENST00000492386 SPTA1P02549 2419 aa12.59□□□□□ -0.39
SEMA4D-220ENST00000492386 IGKV2-40A0A087WW87 121 aaPredicted RBP12.58□□□□□ -0.4
SEMA4D-220ENST00000492386 TCF21O43680 179 aa12.58□□□□□ -0.4
SEMA4D-220ENST00000492386 IGKV2D-40P01614 121 aaPredicted RBP12.58□□□□□ -0.4
SEMA4D-220ENST00000492386 CCDC144NLQ6NUI1 221 aa12.58□□□□□ -0.4
SEMA4D-220ENST00000492386 ZNF747Q9BV97 191 aa12.58□□□□□ -0.4
SEMA4D-220ENST00000492386 RELNP78509 3460 aa12.58□□□□□ -0.4
SEMA4D-220ENST00000492386 TMSB15BA0A087X1C1 80 aa12.58□□□□□ -0.4
SEMA4D-220ENST00000492386 TMEM213A2RRL7 107 aa12.58□□□□□ -0.4
SEMA4D-220ENST00000492386 TMEM189A5PLL7 270 aa12.58□□□□□ -0.4
SEMA4D-220ENST00000492386 OR2T8A6NH00 312 aa12.58□□□□□ -0.4
SEMA4D-220ENST00000492386 H0Y8G0 127 aa12.58□□□□□ -0.4
SEMA4D-220ENST00000492386 CTSGP08311 255 aa12.58□□□□□ -0.4
SEMA4D-220ENST00000492386 EBI3Q14213 229 aa12.58□□□□□ -0.4
SEMA4D-220ENST00000492386 SCRT2Q9NQ03 307 aa12.58□□□□□ -0.4
SEMA4D-220ENST00000492386 EGR2P11161 476 aaPredicted RBP12.57□□□□□ -0.4
SEMA4D-220ENST00000492386 RPL7P18124 248 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-220ENST00000492386 SLC25A34Q6PIV7 304 aa12.57□□□□□ -0.4
SEMA4D-220ENST00000492386 C1orf122Q6ZSJ8 110 aa12.57□□□□□ -0.4
SEMA4D-220ENST00000492386 FA2HQ7L5A8 372 aa12.57□□□□□ -0.4
SEMA4D-220ENST00000492386 PRSS3P2Q8NHM4 247 aa12.57□□□□□ -0.4
SEMA4D-220ENST00000492386 THYN1Q9P016 225 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms