RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 TMEM41BQ5BJD5 291 aa11.74□□□□□ -0.53
TRA2A-208ENST00000490942 PQLC2Q6ZP29 291 aa11.74□□□□□ -0.53
TRA2A-208ENST00000490942 MIR17HGQ75NE6 70 aa11.74□□□□□ -0.53
TRA2A-208ENST00000490942 BAP18Q8IXM2 172 aa11.74□□□□□ -0.53
TRA2A-208ENST00000490942 SH3BGRL3Q9H299 93 aa11.74□□□□□ -0.53
TRA2A-208ENST00000490942 OR51M1Q9H341 326 aa11.74□□□□□ -0.53
TRA2A-208ENST00000490942 UBQLN2Q9UHD9 624 aa11.74□□□□□ -0.53
TRA2A-208ENST00000490942 KIR2DL5BA0A0G2JN68 375 aa11.73□□□□□ -0.53
TRA2A-208ENST00000490942 KIR2DL5BA0A0G2JPC4 375 aa11.73□□□□□ -0.53
TRA2A-208ENST00000490942 UMAD1C9J7I0 102 aa11.73□□□□□ -0.53
TRA2A-208ENST00000490942 RAB2AP61019 212 aa11.73□□□□□ -0.53
TRA2A-208ENST00000490942 PSMG4Q5JS54 123 aa11.73□□□□□ -0.53
TRA2A-208ENST00000490942 EIF5AL1Q6IS14 154 aaKnown RBP11.73□□□□□ -0.53
TRA2A-208ENST00000490942 KIR2DL5AQ8N109 375 aa11.73□□□□□ -0.53
TRA2A-208ENST00000490942 C9orf62Q8N4C0 152 aa11.73□□□□□ -0.53
TRA2A-208ENST00000490942 RPP25LQ8N5L8 163 aaKnown RBP11.73□□□□□ -0.53
TRA2A-208ENST00000490942 KIR2DL5BQ8NHK3 375 aa11.73□□□□□ -0.53
TRA2A-208ENST00000490942 SAT2Q96F10 170 aaPredicted RBP11.73□□□□□ -0.53
TRA2A-208ENST00000490942 ZNF331Q9NQX6 463 aaPredicted RBP11.73□□□□□ -0.53
TRA2A-208ENST00000490942 TRBV19A0A075B6N1 114 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 LOC102724200A0A096LPH7 203 aaPredicted RBP11.72□□□□□ -0.53
TRA2A-208ENST00000490942 TRAV8-2A0A0B4J237 113 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 H3BQ15 152 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 CDC34P49427 236 aaPredicted RBP11.72□□□□□ -0.53
TRA2A-208ENST00000490942 PSG9Q00887 426 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 CD300CQ08708 224 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 AKR1C8PQ5T2L2 129 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 FOXI2Q6ZQN5 318 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 SLC51BQ86UW2 128 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 LRRC20Q8TCA0 184 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 CLUHP3Q96NS8 147 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 CITED4Q96RK1 184 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 PAXXQ9BUH6 204 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 ACTR3CQ9C0K3 210 aaPredicted RBP11.72□□□□□ -0.53
TRA2A-208ENST00000490942 WFDC10AQ9H1F0 79 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 RPRMQ9NS64 109 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 RFNGQ9Y644 331 aa11.72□□□□□ -0.53
TRA2A-208ENST00000490942 NBEAP1P0C6P0 100 aa11.71□□□□□ -0.53
TRA2A-208ENST00000490942 NHLRC4P0CG21 123 aaPredicted RBP11.71□□□□□ -0.53
TRA2A-208ENST00000490942 STAG3L2P0CL84 134 aa11.71□□□□□ -0.53
TRA2A-208ENST00000490942 STAG3L3P0CL85 134 aa11.71□□□□□ -0.53
TRA2A-208ENST00000490942 APRG1Q8IVJ8 170 aa11.71□□□□□ -0.53
TRA2A-208ENST00000490942 RNF141Q8WVD5 230 aa11.71□□□□□ -0.53
TRA2A-208ENST00000490942 FXYD5Q96DB9 178 aa11.71□□□□□ -0.53
TRA2A-208ENST00000490942 ZNF586Q9NXT0 402 aa11.71□□□□□ -0.53
TRA2A-208ENST00000490942 RBMY1BA6NDE4 496 aaKnown RBP11.7□□□□□ -0.54
TRA2A-208ENST00000490942 RBMY1EA6NEQ0 496 aaKnown RBP11.7□□□□□ -0.54
TRA2A-208ENST00000490942 UBE2CO00762 179 aa11.7□□□□□ -0.54
TRA2A-208ENST00000490942 OR7C2O60412 319 aa11.7□□□□□ -0.54
TRA2A-208ENST00000490942 RBMY1DP0C7P1 496 aaKnown RBP11.7□□□□□ -0.54
TRA2A-208ENST00000490942 HLA-DRB4P13762 266 aa11.7□□□□□ -0.54
TRA2A-208ENST00000490942 APOC4P55056 127 aa11.7□□□□□ -0.54
TRA2A-208ENST00000490942 FAM122CQ6P4D5 195 aa11.7□□□□□ -0.54
TRA2A-208ENST00000490942 DPPA3Q6W0C5 159 aa11.7□□□□□ -0.54
TRA2A-208ENST00000490942 LYPD1Q8N2G4 141 aa11.7□□□□□ -0.54
TRA2A-208ENST00000490942 RAB24Q969Q5 203 aa11.7□□□□□ -0.54
TRA2A-208ENST00000490942 MRPL53Q96EL3 112 aaKnown RBP11.7□□□□□ -0.54
TRA2A-208ENST00000490942 LINC00052Q96N35 136 aa11.7□□□□□ -0.54
TRA2A-208ENST00000490942 SAV1Q9H4B6 383 aaPredicted RBP11.7□□□□□ -0.54
TRA2A-208ENST00000490942 PRELID1Q9Y255 219 aa11.7□□□□□ -0.54
TRA2A-208ENST00000490942 HLA-DRB4X5D2U9 266 aa11.7□□□□□ -0.54
TRA2A-208ENST00000490942 CTXND1A0A1B0GTU2 59 aa11.69□□□□□ -0.54
TRA2A-208ENST00000490942 PYYP10082 97 aa11.69□□□□□ -0.54
TRA2A-208ENST00000490942 PSG3Q16557 428 aa11.69□□□□□ -0.54
TRA2A-208ENST00000490942 MORN3Q6PF18 240 aaPredicted RBP11.69□□□□□ -0.54
TRA2A-208ENST00000490942 TRPT1Q86TN4 253 aaKnown RBP11.69□□□□□ -0.54
TRA2A-208ENST00000490942 STHQ8IWL8 128 aa11.69□□□□□ -0.54
TRA2A-208ENST00000490942 ZNF503Q96F45 646 aa11.69□□□□□ -0.54
TRA2A-208ENST00000490942 NDUFB4O95168 129 aa11.68□□□□□ -0.54
TRA2A-208ENST00000490942 RAB5CP51148 216 aa11.68□□□□□ -0.54
TRA2A-208ENST00000490942 UBE2L3P68036 154 aaKnown RBP11.68□□□□□ -0.54
TRA2A-208ENST00000490942 EBLN2Q6P2I7 272 aa11.68□□□□□ -0.54
TRA2A-208ENST00000490942 SUN5Q8TC36 379 aa11.68□□□□□ -0.54
TRA2A-208ENST00000490942 AAMDCQ9H7C9 122 aa11.68□□□□□ -0.54
TRA2A-208ENST00000490942 H3BMM0 161 aa11.67□□□□□ -0.54
TRA2A-208ENST00000490942 SLC17A3O00476 420 aa11.67□□□□□ -0.54
TRA2A-208ENST00000490942 DUSP14O95147 198 aaKnown RBP11.67□□□□□ -0.54
TRA2A-208ENST00000490942 CXorf1O96002 111 aa11.67□□□□□ -0.54
TRA2A-208ENST00000490942 ZNF124Q15973 351 aa11.67□□□□□ -0.54
TRA2A-208ENST00000490942 HAGHQ16775 308 aa11.67□□□□□ -0.54
TRA2A-208ENST00000490942 ACTL10Q5JWF8 245 aa11.67□□□□□ -0.54
TRA2A-208ENST00000490942 ARL6IP6Q8N6S5 226 aa11.67□□□□□ -0.54
TRA2A-208ENST00000490942 PHYHIPLQ96FC7 376 aa11.67□□□□□ -0.54
TRA2A-208ENST00000490942 C20orf173Q96LM9 149 aa11.67□□□□□ -0.54
TRA2A-208ENST00000490942 TM2D3Q9BRN9 247 aa11.67□□□□□ -0.54
TRA2A-208ENST00000490942 TMEM167BQ9NRX6 74 aa11.67□□□□□ -0.54
TRA2A-208ENST00000490942 A0A0J9YX75 114 aa11.66□□□□□ -0.54
TRA2A-208ENST00000490942 A8MTW9 85 aa11.66□□□□□ -0.54
TRA2A-208ENST00000490942 OR10J4P0C629 311 aa11.66□□□□□ -0.54
TRA2A-208ENST00000490942 NUTF2P61970 127 aaKnown RBP11.66□□□□□ -0.54
TRA2A-208ENST00000490942 Q6ZWC4 215 aa11.66□□□□□ -0.54
TRA2A-208ENST00000490942 SBSPONQ8IVN8 264 aa11.66□□□□□ -0.54
TRA2A-208ENST00000490942 ZNF738Q8NE65 137 aa11.66□□□□□ -0.54
TRA2A-208ENST00000490942 CSTL1Q9H114 145 aa11.66□□□□□ -0.54
TRA2A-208ENST00000490942 PRKDCP78527 4128 aaKnown RBP11.66□□□□□ -0.54
TRA2A-208ENST00000490942 KNCNA6PVL3 124 aa11.65□□□□□ -0.54
TRA2A-208ENST00000490942 ARL14EPLP0DKL9 152 aa11.65□□□□□ -0.54
TRA2A-208ENST00000490942 ZNF726P1Q15940 193 aa11.65□□□□□ -0.54
TRA2A-208ENST00000490942 RNF182Q8N6D2 247 aa11.65□□□□□ -0.54
TRA2A-208ENST00000490942 OR8A1Q8NGG7 326 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms