RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 SMIM18P0DKX4 95 aa10.69□□□□□ -0.7
LMNB2-203ENST00000490554 PLP1P60201 277 aa10.69□□□□□ -0.7
LMNB2-203ENST00000490554 SPCS2Q15005 226 aa10.69□□□□□ -0.7
LMNB2-203ENST00000490554 TMEM128Q5BJH2 165 aa10.69□□□□□ -0.7
LMNB2-203ENST00000490554 SPANXN5Q5MJ07 72 aa10.69□□□□□ -0.7
LMNB2-203ENST00000490554 CYP2G1PQ6ZSU1 146 aa10.69□□□□□ -0.7
LMNB2-203ENST00000490554 RPUSD4Q96CM3 377 aaKnown RBP10.69□□□□□ -0.7
LMNB2-203ENST00000490554 HYPMO75409 117 aa10.68□□□□□ -0.7
LMNB2-203ENST00000490554 ADAP1O75689 374 aa10.68□□□□□ -0.7
LMNB2-203ENST00000490554 KIR3DS1Q14943 382 aa10.68□□□□□ -0.7
LMNB2-203ENST00000490554 TMED4Q7Z7H5 227 aa10.68□□□□□ -0.7
LMNB2-203ENST00000490554 C20orf144Q9BQM9 153 aa10.68□□□□□ -0.7
LMNB2-203ENST00000490554 RSL24D1Q9UHA3 163 aaKnown RBP10.68□□□□□ -0.7
LMNB2-203ENST00000490554 GAGE12BA1L429 117 aa10.67□□□□□ -0.7
LMNB2-203ENST00000490554 H3BP45 60 aa10.67□□□□□ -0.7
LMNB2-203ENST00000490554 MRPS12O15235 138 aaKnown RBP10.67□□□□□ -0.7
LMNB2-203ENST00000490554 GAGE7O76087 117 aa10.67□□□□□ -0.7
LMNB2-203ENST00000490554 OR5G3P0C626 314 aa10.67□□□□□ -0.7
LMNB2-203ENST00000490554 LINC00869P0C866 280 aa10.67□□□□□ -0.7
LMNB2-203ENST00000490554 GAGE12FP0CL80 117 aa10.67□□□□□ -0.7
LMNB2-203ENST00000490554 GAGE12GP0CL81 117 aa10.67□□□□□ -0.7
LMNB2-203ENST00000490554 GAGE12IP0CL82 117 aa10.67□□□□□ -0.7
LMNB2-203ENST00000490554 Q6ZRN7 208 aaPredicted RBP10.67□□□□□ -0.7
LMNB2-203ENST00000490554 LRRC20Q8TCA0 184 aa10.67□□□□□ -0.7
LMNB2-203ENST00000490554 STRAPQ9Y3F4 350 aaKnown RBP10.67□□□□□ -0.7
LMNB2-203ENST00000490554 DMBT1Q9UGM3 2413 aaPredicted RBP10.66□□□□□ -0.7
LMNB2-203ENST00000490554 SMCO3A2RU48 225 aa10.66□□□□□ -0.7
LMNB2-203ENST00000490554 RLN2P04090 185 aa10.66□□□□□ -0.7
LMNB2-203ENST00000490554 INAFM2P0DMQ5 153 aa10.66□□□□□ -0.7
LMNB2-203ENST00000490554 VAMP1P23763 118 aa10.66□□□□□ -0.7
LMNB2-203ENST00000490554 LINC00315P59091 139 aa10.66□□□□□ -0.7
LMNB2-203ENST00000490554 CCDC28AQ8IWP9 274 aa10.66□□□□□ -0.7
LMNB2-203ENST00000490554 SOSTQ9BQB4 213 aa10.66□□□□□ -0.7
LMNB2-203ENST00000490554 ZNF331Q9NQX6 463 aaPredicted RBP10.66□□□□□ -0.7
LMNB2-203ENST00000490554 XGP55808 180 aa10.65□□□□□ -0.7
LMNB2-203ENST00000490554 SELENOTP62341 195 aa10.65□□□□□ -0.7
LMNB2-203ENST00000490554 GFI1BQ5VTD9 330 aa10.65□□□□□ -0.7
LMNB2-203ENST00000490554 PATE2Q6UY27 113 aa10.65□□□□□ -0.7
LMNB2-203ENST00000490554 LYPD1Q8N2G4 141 aa10.65□□□□□ -0.7
LMNB2-203ENST00000490554 PARD6GQ9BYG4 376 aaPredicted RBP10.65□□□□□ -0.7
LMNB2-203ENST00000490554 PGPEP1Q9NXJ5 209 aa10.65□□□□□ -0.7
LMNB2-203ENST00000490554 PMS2P5A8MQ11 134 aa10.64□□□□□ -0.71
LMNB2-203ENST00000490554 SFT2D2O95562 160 aa10.64□□□□□ -0.71
LMNB2-203ENST00000490554 HOXB5P09067 269 aa10.64□□□□□ -0.71
LMNB2-203ENST00000490554 CXCL2P19875 107 aa10.64□□□□□ -0.71
LMNB2-203ENST00000490554 S100A7AQ86SG5 101 aa10.64□□□□□ -0.71
LMNB2-203ENST00000490554 ARL6Q9H0F7 186 aa10.64□□□□□ -0.71
LMNB2-203ENST00000490554 TMPRSS5Q9H3S3 457 aa10.64□□□□□ -0.71
LMNB2-203ENST00000490554 CCDC59Q9P031 241 aaKnown RBP10.64□□□□□ -0.71
LMNB2-203ENST00000490554 VPS13BQ7Z7G8 4022 aa10.63□□□□□ -0.71
LMNB2-203ENST00000490554 A0A096LPF7 62 aa10.63□□□□□ -0.71
LMNB2-203ENST00000490554 SNURFLB1AK76 121 aa10.63□□□□□ -0.71
LMNB2-203ENST00000490554 ANXA7P20073 488 aaKnown RBP10.63□□□□□ -0.71
LMNB2-203ENST00000490554 FAUP35544 74 aaKnown RBP10.63□□□□□ -0.71
LMNB2-203ENST00000490554 FUSP35637 526 aaKnown RBP eCLIP10.63□□□□□ -0.71
LMNB2-203ENST00000490554 ID3Q02535 119 aa10.63□□□□□ -0.71
LMNB2-203ENST00000490554 PPP1R1AQ13522 171 aa10.63□□□□□ -0.71
LMNB2-203ENST00000490554 LCN15Q6UWW0 184 aa10.63□□□□□ -0.71
LMNB2-203ENST00000490554 DYNC2LI1Q8TCX1 351 aa10.63□□□□□ -0.71
LMNB2-203ENST00000490554 VSIG2Q96IQ7 327 aa10.63□□□□□ -0.71
LMNB2-203ENST00000490554 SLC50A1Q9BRV3 221 aa10.63□□□□□ -0.71
LMNB2-203ENST00000490554 ARV1Q9H2C2 271 aa10.63□□□□□ -0.71
LMNB2-203ENST00000490554 RNF24Q9Y225 148 aa10.63□□□□□ -0.71
LMNB2-203ENST00000490554 FABP12A6NFH5 140 aa10.62□□□□□ -0.71
LMNB2-203ENST00000490554 PRAC2D3DTV9 90 aa10.62□□□□□ -0.71
LMNB2-203ENST00000490554 K7EPK0 472 aa10.62□□□□□ -0.71
LMNB2-203ENST00000490554 SNRPCP09234 159 aaKnown RBP10.62□□□□□ -0.71
LMNB2-203ENST00000490554 POLR2GP62487 172 aaKnown RBP eCLIP10.62□□□□□ -0.71
LMNB2-203ENST00000490554 DAZ2Q13117 558 aaKnown RBP10.62□□□□□ -0.71
LMNB2-203ENST00000490554 Q6ZTI0 123 aa10.62□□□□□ -0.71
LMNB2-203ENST00000490554 CCDC190Q86UF4 302 aa10.62□□□□□ -0.71
LMNB2-203ENST00000490554 PSENENQ9NZ42 101 aa10.62□□□□□ -0.71
LMNB2-203ENST00000490554 PTTG2Q9NZH5 202 aa10.62□□□□□ -0.71
LMNB2-203ENST00000490554 MYCBP2O75592 4640 aa10.61□□□□□ -0.71
LMNB2-203ENST00000490554 CCNKO75909 580 aa10.61□□□□□ -0.71
LMNB2-203ENST00000490554 TNFSF8P32971 234 aa10.61□□□□□ -0.71
LMNB2-203ENST00000490554 RRAS2P62070 204 aaPredicted RBP10.61□□□□□ -0.71
LMNB2-203ENST00000490554 Q5VSD8 79 aa10.61□□□□□ -0.71
LMNB2-203ENST00000490554 CDPF1Q6NVV7 123 aa10.61□□□□□ -0.71
LMNB2-203ENST00000490554 ZBTB8BQ8NAP8 495 aaPredicted RBP10.61□□□□□ -0.71
LMNB2-203ENST00000490554 TRIM63Q969Q1 353 aa10.61□□□□□ -0.71
LMNB2-203ENST00000490554 SLC25A21Q9BQT8 299 aaPredicted RBP10.61□□□□□ -0.71
LMNB2-203ENST00000490554 NPVFQ9HCQ7 196 aa10.61□□□□□ -0.71
LMNB2-203ENST00000490554 FNDC10F2Z333 226 aa10.6□□□□□ -0.71
LMNB2-203ENST00000490554 SLC17A3O00476 420 aa10.6□□□□□ -0.71
LMNB2-203ENST00000490554 EREGO14944 169 aa10.6□□□□□ -0.71
LMNB2-203ENST00000490554 SIVA1O15304 175 aa10.6□□□□□ -0.71
LMNB2-203ENST00000490554 AP3S2P59780 193 aa10.6□□□□□ -0.71
LMNB2-203ENST00000490554 SLC38A11Q08AI6 406 aa10.6□□□□□ -0.71
LMNB2-203ENST00000490554 C4orf46Q504U0 113 aa10.6□□□□□ -0.71
LMNB2-203ENST00000490554 PXDC1Q5TGL8 231 aa10.6□□□□□ -0.71
LMNB2-203ENST00000490554 LINC00305Q7Z4B0 112 aa10.6□□□□□ -0.71
LMNB2-203ENST00000490554 C18orf15Q96N68 181 aa10.6□□□□□ -0.71
LMNB2-203ENST00000490554 PYGO2Q9BRQ0 406 aa10.6□□□□□ -0.71
LMNB2-203ENST00000490554 SLIRPQ9GZT3 109 aaKnown RBP10.6□□□□□ -0.71
LMNB2-203ENST00000490554 TRAV12-3A0A0B4J271 114 aa10.59□□□□□ -0.71
LMNB2-203ENST00000490554 H3BTX0 84 aa10.59□□□□□ -0.71
LMNB2-203ENST00000490554 J3KRW8 73 aa10.59□□□□□ -0.71
LMNB2-203ENST00000490554 CT45A10P0DMU9 189 aa10.59□□□□□ -0.71
LMNB2-203ENST00000490554 ERVFC1-1P60608 527 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms