RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 WRBO00258 174 aa11.18□□□□□ -0.62
PDE6D-205ENST00000486044 CTDSP2O14595 271 aa11.18□□□□□ -0.62
PDE6D-205ENST00000486044 SYNGR2O43760 224 aa11.18□□□□□ -0.62
PDE6D-205ENST00000486044 RPUSD4Q96CM3 377 aaKnown RBP11.18□□□□□ -0.62
PDE6D-205ENST00000486044 DIRAS2Q96HU8 199 aa11.18□□□□□ -0.62
PDE6D-205ENST00000486044 NAA50Q9GZZ1 169 aaKnown RBP11.18□□□□□ -0.62
PDE6D-205ENST00000486044 HERC1Q15751 4861 aa11.18□□□□□ -0.62
PDE6D-205ENST00000486044 A0A087X0K7 114 aa11.17□□□□□ -0.62
PDE6D-205ENST00000486044 SNURFLB1AK76 121 aa11.17□□□□□ -0.62
PDE6D-205ENST00000486044 OR5G3P0C626 314 aa11.17□□□□□ -0.62
PDE6D-205ENST00000486044 TMEM128Q5BJH2 165 aa11.17□□□□□ -0.62
PDE6D-205ENST00000486044 SPANXN5Q5MJ07 72 aa11.17□□□□□ -0.62
PDE6D-205ENST00000486044 CYP2G1PQ6ZSU1 146 aa11.17□□□□□ -0.62
PDE6D-205ENST00000486044 LINC00612Q8N6U2 182 aa11.17□□□□□ -0.62
PDE6D-205ENST00000486044 GAGE12BA1L429 117 aa11.16□□□□□ -0.62
PDE6D-205ENST00000486044 GAGE7O76087 117 aa11.16□□□□□ -0.62
PDE6D-205ENST00000486044 GAGE12FP0CL80 117 aa11.16□□□□□ -0.62
PDE6D-205ENST00000486044 GAGE12GP0CL81 117 aa11.16□□□□□ -0.62
PDE6D-205ENST00000486044 GAGE12IP0CL82 117 aa11.16□□□□□ -0.62
PDE6D-205ENST00000486044 ANXA7P20073 488 aaKnown RBP11.16□□□□□ -0.62
PDE6D-205ENST00000486044 HOXA5P20719 270 aa11.16□□□□□ -0.62
PDE6D-205ENST00000486044 SELENOTP62341 195 aa11.16□□□□□ -0.62
PDE6D-205ENST00000486044 ACOT7LQ6ZUV0 252 aa11.16□□□□□ -0.62
PDE6D-205ENST00000486044 TMED4Q7Z7H5 227 aa11.16□□□□□ -0.62
PDE6D-205ENST00000486044 LYPD1Q8N2G4 141 aa11.16□□□□□ -0.62
PDE6D-205ENST00000486044 RSL24D1Q9UHA3 163 aaKnown RBP11.16□□□□□ -0.62
PDE6D-205ENST00000486044 STRAPQ9Y3F4 350 aaKnown RBP11.16□□□□□ -0.62
PDE6D-205ENST00000486044 SMCO3A2RU48 225 aa11.15□□□□□ -0.62
PDE6D-205ENST00000486044 LINC00869P0C866 280 aa11.15□□□□□ -0.62
PDE6D-205ENST00000486044 VAMP1P23763 118 aa11.15□□□□□ -0.62
PDE6D-205ENST00000486044 LINC00315P59091 139 aa11.15□□□□□ -0.62
PDE6D-205ENST00000486044 PLP1P60201 277 aa11.15□□□□□ -0.62
PDE6D-205ENST00000486044 CDPF1Q6NVV7 123 aa11.15□□□□□ -0.62
PDE6D-205ENST00000486044 LRTM2Q8N967 370 aa11.15□□□□□ -0.62
PDE6D-205ENST00000486044 FRZBQ92765 325 aa11.15□□□□□ -0.62
PDE6D-205ENST00000486044 DNAH5Q8TE73 4624 aa11.15□□□□□ -0.62
PDE6D-205ENST00000486044 CXCL2P19875 107 aa11.14□□□□□ -0.63
PDE6D-205ENST00000486044 FAUP35544 74 aaKnown RBP11.14□□□□□ -0.63
PDE6D-205ENST00000486044 ERVFC1-1P60608 527 aa11.14□□□□□ -0.63
PDE6D-205ENST00000486044 PMS2P5A8MQ11 134 aa11.13□□□□□ -0.63
PDE6D-205ENST00000486044 H3BP45 60 aa11.13□□□□□ -0.63
PDE6D-205ENST00000486044 LCN15Q6UWW0 184 aa11.13□□□□□ -0.63
PDE6D-205ENST00000486044 CCDC190Q86UF4 302 aa11.13□□□□□ -0.63
PDE6D-205ENST00000486044 SLC50A1Q9BRV3 221 aa11.13□□□□□ -0.63
PDE6D-205ENST00000486044 SIVA1O15304 175 aa11.12□□□□□ -0.63
PDE6D-205ENST00000486044 IFNA5P01569 189 aa11.12□□□□□ -0.63
PDE6D-205ENST00000486044 Q6ZRN7 208 aaPredicted RBP11.12□□□□□ -0.63
PDE6D-205ENST00000486044 ARL6Q9H0F7 186 aa11.12□□□□□ -0.63
PDE6D-205ENST00000486044 ZNF331Q9NQX6 463 aaPredicted RBP11.12□□□□□ -0.63
PDE6D-205ENST00000486044 A0A096LPF7 62 aa11.11□□□□□ -0.63
PDE6D-205ENST00000486044 DAZ2Q13117 558 aaKnown RBP11.11□□□□□ -0.63
PDE6D-205ENST00000486044 PXDC1Q5TGL8 231 aa11.11□□□□□ -0.63
PDE6D-205ENST00000486044 Q5VSD8 79 aa11.11□□□□□ -0.63
PDE6D-205ENST00000486044 GFI1BQ5VTD9 330 aa11.11□□□□□ -0.63
PDE6D-205ENST00000486044 NFE4Q86UQ8 179 aa11.11□□□□□ -0.63
PDE6D-205ENST00000486044 PYGO2Q9BRQ0 406 aa11.11□□□□□ -0.63
PDE6D-205ENST00000486044 TMPRSS5Q9H3S3 457 aa11.11□□□□□ -0.63
PDE6D-205ENST00000486044 TRGV2A0A075B6R0 118 aa11.1□□□□□ -0.63
PDE6D-205ENST00000486044 HOXB5P09067 269 aa11.1□□□□□ -0.63
PDE6D-205ENST00000486044 PRB4P10163 310 aaPredicted RBP11.1□□□□□ -0.63
PDE6D-205ENST00000486044 XGP55808 180 aa11.1□□□□□ -0.63
PDE6D-205ENST00000486044 AP3S2P59780 193 aa11.1□□□□□ -0.63
PDE6D-205ENST00000486044 KIR3DS1Q14943 382 aa11.1□□□□□ -0.63
PDE6D-205ENST00000486044 ARV1Q9H2C2 271 aa11.1□□□□□ -0.63
PDE6D-205ENST00000486044 NPVFQ9HCQ7 196 aa11.1□□□□□ -0.63
PDE6D-205ENST00000486044 FABP12A6NFH5 140 aa11.09□□□□□ -0.63
PDE6D-205ENST00000486044 LEPP41159 167 aa11.09□□□□□ -0.63
PDE6D-205ENST00000486044 Q6ZTI0 123 aa11.09□□□□□ -0.63
PDE6D-205ENST00000486044 BPIFA4PQ86YQ2 179 aa11.09□□□□□ -0.63
PDE6D-205ENST00000486044 VSIG2Q96IQ7 327 aa11.09□□□□□ -0.63
PDE6D-205ENST00000486044 SLC25A21Q9BQT8 299 aaPredicted RBP11.09□□□□□ -0.63
PDE6D-205ENST00000486044 PSENENQ9NZ42 101 aa11.09□□□□□ -0.63
PDE6D-205ENST00000486044 TRAV9-2A0A087WT02 112 aa11.08□□□□□ -0.64
PDE6D-205ENST00000486044 TRAV12-3A0A0B4J271 114 aa11.08□□□□□ -0.64
PDE6D-205ENST00000486044 FNDC10F2Z333 226 aa11.08□□□□□ -0.64
PDE6D-205ENST00000486044 K7EPK0 472 aa11.08□□□□□ -0.64
PDE6D-205ENST00000486044 GOSR2O14653 212 aa11.08□□□□□ -0.64
PDE6D-205ENST00000486044 MRPS12O15235 138 aaKnown RBP11.08□□□□□ -0.64
PDE6D-205ENST00000486044 SFT2D2O95562 160 aa11.08□□□□□ -0.64
PDE6D-205ENST00000486044 ID3Q02535 119 aa11.08□□□□□ -0.64
PDE6D-205ENST00000486044 SPCS2Q15005 226 aa11.08□□□□□ -0.64
PDE6D-205ENST00000486044 TEPPQ6URK8 271 aa11.08□□□□□ -0.64
PDE6D-205ENST00000486044 PATE2Q6UY27 113 aa11.08□□□□□ -0.64
PDE6D-205ENST00000486044 LINC00305Q7Z4B0 112 aa11.08□□□□□ -0.64
PDE6D-205ENST00000486044 C18orf15Q96N68 181 aa11.08□□□□□ -0.64
PDE6D-205ENST00000486044 ODF3Q96PU9 254 aa11.08□□□□□ -0.64
PDE6D-205ENST00000486044 PARD6GQ9BYG4 376 aaPredicted RBP11.08□□□□□ -0.64
PDE6D-205ENST00000486044 PXMP4Q9Y6I8 212 aa11.08□□□□□ -0.64
PDE6D-205ENST00000486044 J3KRW8 73 aa11.07□□□□□ -0.64
PDE6D-205ENST00000486044 RRAS2P62070 204 aaPredicted RBP11.07□□□□□ -0.64
PDE6D-205ENST00000486044 POLR2GP62487 172 aaKnown RBP eCLIP11.07□□□□□ -0.64
PDE6D-205ENST00000486044 PPP1R1AQ13522 171 aa11.07□□□□□ -0.64
PDE6D-205ENST00000486044 C4orf46Q504U0 113 aa11.07□□□□□ -0.64
PDE6D-205ENST00000486044 ZNF546Q86UE3 836 aa11.07□□□□□ -0.64
PDE6D-205ENST00000486044 ZNF680Q8NEM1 530 aa11.07□□□□□ -0.64
PDE6D-205ENST00000486044 OR10P1Q8NGE3 313 aa11.07□□□□□ -0.64
PDE6D-205ENST00000486044 CCDC59Q9P031 241 aaKnown RBP11.07□□□□□ -0.64
PDE6D-205ENST00000486044 MGAT4CQ9UBM8 478 aa11.07□□□□□ -0.64
PDE6D-205ENST00000486044 NXPH4O95158 308 aa11.06□□□□□ -0.64
PDE6D-205ENST00000486044 SNRPCP09234 159 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms