RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 MDFIC2A0A1B0GVS7 189 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 H7C1C5 153 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 RBFOX2O43251 390 aaKnown RBP eCLIP2.17□□□□□ -2.06
SMC6-208ENST00000481708 IGKV3-15P01624 115 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 APOC1P02654 83 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 UQCRHP07919 91 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 FGF12P61328 243 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 LCN6P62502 163 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 TSC22D3Q99576 134 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 OPRPNQ99935 248 aaPredicted RBP2.17□□□□□ -2.06
SMC6-208ENST00000481708 NDFIP1Q9BT67 221 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 TAAR3PQ9P1P4 343 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 HSPB8Q9UJY1 196 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 U3KQ87 197 aa2.17□□□□□ -2.06
SMC6-208ENST00000481708 IGHV7-4-1A0A0J9YVY3 117 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 A8MWP4 228 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 POP7O75817 140 aaKnown RBP2.16□□□□□ -2.06
SMC6-208ENST00000481708 PDYNP01213 254 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 IGKV1-5P01602 117 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 SRP9P49458 86 aaKnown RBP2.16□□□□□ -2.06
SMC6-208ENST00000481708 GRK1Q15835 563 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.16□□□□□ -2.06
SMC6-208ENST00000481708 ZNF439Q8NDP4 499 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 C16orf74Q96GX8 76 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 ABHD14BQ96IU4 210 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 CHST6Q9GZX3 395 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 OTORQ9NRC9 128 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 KCNIP2Q9NS61 270 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 TRAV36DV7A0A075B6V5 113 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 CHST10O43529 356 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 HLA-DQB1P01920 261 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 GABRA3P34903 492 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 LYZP61626 148 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 ZC2HC1BQ5TFG8 222 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 SCIMPQ6UWF3 145 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 BAP18Q8IXM2 172 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 OR4E2Q8NGC2 313 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 STAG3L4Q8TBR4 150 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 MYOZ3Q8TDC0 251 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 OR5P3Q8WZ94 311 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 CAMK2N2Q96S95 79 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 VPS25Q9BRG1 176 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 SHANK2-AS3Q9BTD1 123 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 TTTY13Q9BZ97 58 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 DUXBA0A1W2PPF3 345 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 IZUMO1RA6ND01 250 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 CD300LBA8K4G0 201 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 CST8O60676 142 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 ZNF324O75467 553 aaPredicted RBP2.16□□□□□ -2.06
SMC6-208ENST00000481708 APCSP02743 223 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 C8GP07360 202 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 SCGB1C2P0DMR2 95 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 MAXP61244 160 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 FCN2Q15485 313 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 ZNF709Q8N972 641 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 SCGB1C1Q8TD33 95 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 ADAT3Q96EY9 351 aaPredicted RBP2.16□□□□□ -2.06
SMC6-208ENST00000481708 GPX7Q96SL4 187 aaPredicted RBP2.16□□□□□ -2.06
SMC6-208ENST00000481708 TBL1XR1Q9BZK7 514 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 TAF9BQ9HBM6 251 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 COA4Q9NYJ1 87 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 PCTPQ9UKL6 214 aa2.16□□□□□ -2.06
SMC6-208ENST00000481708 PKD1L1Q8TDX9 2849 aa2.15□□□□□ -2.06
SMC6-208ENST00000481708 TENM1Q9UKZ4 2725 aa2.15□□□□□ -2.06
SMC6-208ENST00000481708 SCN3AQ9NY46 2000 aa2.15□□□□□ -2.06
SMC6-208ENST00000481708 ARID1AO14497 2285 aa2.15□□□□□ -2.06
SMC6-208ENST00000481708 C9orf170A2RU37 121 aa2.15□□□□□ -2.06
SMC6-208ENST00000481708 CYB5BO43169 146 aa2.15□□□□□ -2.06
SMC6-208ENST00000481708 H2AFVQ71UI9 128 aa2.15□□□□□ -2.06
SMC6-208ENST00000481708 C14orf144Q96I85 54 aa2.15□□□□□ -2.06
SMC6-208ENST00000481708 GGACTQ9BVM4 153 aa2.15□□□□□ -2.06
SMC6-208ENST00000481708 MED11Q9P086 117 aa2.15□□□□□ -2.06
SMC6-208ENST00000481708 MED31Q9Y3C7 131 aa2.15□□□□□ -2.06
SMC6-208ENST00000481708 PLCE1Q9P212 2302 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 IGHV3-43A0A0B4J1X8 118 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 H0YGG7 62 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 H7C423 109 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 GNG7O60262 68 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 TRGV3P03979 118 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 IGKV1-16P04430 117 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 UBBP0CG47 229 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 RPS10P46783 165 aaKnown RBP2.15□□□□□ -2.07
SMC6-208ENST00000481708 SERPINB10P48595 397 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 MSMO1Q15800 293 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 LINC00322Q6ZN03 302 aaPredicted RBP2.15□□□□□ -2.07
SMC6-208ENST00000481708 ORMDL3Q8N138 153 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 RPP25LQ8N5L8 163 aaKnown RBP2.15□□□□□ -2.07
SMC6-208ENST00000481708 OR10D4PQ8NGN7 298 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 OR8D2Q9GZM6 311 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 C20orf27Q9GZN8 174 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 RPP21Q9H633 154 aaKnown RBP2.15□□□□□ -2.07
SMC6-208ENST00000481708 TVP23BQ9NYZ1 205 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 ZNF222Q9UK12 451 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 FLGP20930 4061 aaPredicted RBP2.15□□□□□ -2.07
SMC6-208ENST00000481708 A8MUU9 505 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 G3V2T6 193 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 IGHV1-8P0DP01 117 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 DYNLT3P51808 116 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 RPS28P62857 69 aaKnown RBP2.15□□□□□ -2.07
SMC6-208ENST00000481708 SPATA12Q7Z6I5 190 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms