RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	MRPL32	Q9BYC8	188 aa	Known RBP	11.46	□□□□□ -0.57
HDLBP-238	ENST00000479894	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.46	□□□□□ -0.57
HDLBP-238	ENST00000479894	MLX	Q9UH92	298 aa		11.46	□□□□□ -0.57
HDLBP-238	ENST00000479894	DNASE2	O00115	360 aa	Predicted RBP	11.45	□□□□□ -0.58
HDLBP-238	ENST00000479894	TAS2R45	P59539	299 aa		11.45	□□□□□ -0.58
HDLBP-238	ENST00000479894	RHOB	P62745	196 aa		11.45	□□□□□ -0.58
HDLBP-238	ENST00000479894	DEFB135	Q30KP9	77 aa		11.45	□□□□□ -0.58
HDLBP-238	ENST00000479894	FFAR4	Q5NUL3	377 aa		11.45	□□□□□ -0.58
HDLBP-238	ENST00000479894	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.45	□□□□□ -0.58
HDLBP-238	ENST00000479894	LINC00305	Q7Z4B0	112 aa		11.45	□□□□□ -0.58
HDLBP-238	ENST00000479894	RNF183	Q96D59	192 aa		11.45	□□□□□ -0.58
HDLBP-238	ENST00000479894	ZNF471	Q9BX82	626 aa	Predicted RBP	11.45	□□□□□ -0.58
HDLBP-238	ENST00000479894	DOK5	Q9P104	306 aa		11.45	□□□□□ -0.58
HDLBP-238	ENST00000479894	PKD1	P98161	4303 aa		11.44	□□□□□ -0.58
HDLBP-238	ENST00000479894	IGHV3-49	A0A0A0MS15	119 aa		11.44	□□□□□ -0.58
HDLBP-238	ENST00000479894		A0A1W2PPV4	95 aa		11.44	□□□□□ -0.58
HDLBP-238	ENST00000479894		H3BRN7	92 aa		11.44	□□□□□ -0.58
HDLBP-238	ENST00000479894	TPT1	P13693	172 aa	Known RBP	11.44	□□□□□ -0.58
HDLBP-238	ENST00000479894	CXCL2	P19875	107 aa		11.44	□□□□□ -0.58
HDLBP-238	ENST00000479894	M6PR	P20645	277 aa		11.44	□□□□□ -0.58
HDLBP-238	ENST00000479894	ATP6V0C	P27449	155 aa		11.44	□□□□□ -0.58
HDLBP-238	ENST00000479894	SIGLEC15	Q6ZMC9	328 aa		11.44	□□□□□ -0.58
HDLBP-238	ENST00000479894	BPIFA4P	Q86YQ2	179 aa		11.44	□□□□□ -0.58
HDLBP-238	ENST00000479894	TMEM61	Q8N0U2	210 aa		11.44	□□□□□ -0.58
HDLBP-238	ENST00000479894	C2CD4C	Q8TF44	421 aa		11.44	□□□□□ -0.58
HDLBP-238	ENST00000479894	RSG1	Q9BU20	258 aa		11.44	□□□□□ -0.58
HDLBP-238	ENST00000479894	SEPSECS	Q9HD40	501 aa	Known RBP	11.44	□□□□□ -0.58
HDLBP-238	ENST00000479894	IGHV3OR16-13	A0A075B7E8	117 aa		11.43	□□□□□ -0.58
HDLBP-238	ENST00000479894	IGHV3-74	A0A0B4J1X5	117 aa		11.43	□□□□□ -0.58
HDLBP-238	ENST00000479894	KIR2DL5B	A0A0G2JN68	375 aa		11.43	□□□□□ -0.58
HDLBP-238	ENST00000479894	KIR2DL5B	A0A0G2JPC4	375 aa		11.43	□□□□□ -0.58
HDLBP-238	ENST00000479894	SLC51B	Q86UW2	128 aa		11.43	□□□□□ -0.58
HDLBP-238	ENST00000479894	BAP18	Q8IXM2	172 aa		11.43	□□□□□ -0.58
HDLBP-238	ENST00000479894	KIR2DL5A	Q8N109	375 aa		11.43	□□□□□ -0.58
HDLBP-238	ENST00000479894	KIR2DL5B	Q8NHK3	375 aa		11.43	□□□□□ -0.58
HDLBP-238	ENST00000479894	GLMP	Q8WWB7	406 aa		11.43	□□□□□ -0.58
HDLBP-238	ENST00000479894	TMEM37	Q8WXS4	190 aa		11.43	□□□□□ -0.58
HDLBP-238	ENST00000479894	SLC25A22	Q9H936	323 aa		11.43	□□□□□ -0.58
HDLBP-238	ENST00000479894	IGHV3-66	A0A0C4DH42	116 aa		11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	PRSS29P	A6NIE9	313 aa		11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	UMAD1	C9J7I0	102 aa		11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	APOH	P02749	345 aa	Predicted RBP	11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	SEC11B	P0C7V7	166 aa		11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	ID1	P41134	155 aa		11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	GUK1	Q16774	197 aa		11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	AKR1C8P	Q5T2L2	129 aa		11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	FAM78B	Q5VT40	261 aa		11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	FAM90A2P	Q658T7	463 aa		11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	PATE2	Q6UY27	113 aa		11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	STOML3	Q8TAV4	291 aa		11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	NRN1	Q9NPD7	142 aa		11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	CYTL1	Q9NRR1	136 aa		11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	FUT9	Q9Y231	359 aa		11.42	□□□□□ -0.58
HDLBP-238	ENST00000479894	SNRPD3	P62318	126 aa	Known RBP	11.41	□□□□□ -0.58
HDLBP-238	ENST00000479894	OR10G4	Q8NGN3	311 aa		11.41	□□□□□ -0.58
HDLBP-238	ENST00000479894	OR10G9	Q8NGN4	311 aa		11.41	□□□□□ -0.58
HDLBP-238	ENST00000479894	OR10G7	Q8NGN6	311 aa		11.41	□□□□□ -0.58
HDLBP-238	ENST00000479894	UHRF2	Q96PU4	802 aa		11.41	□□□□□ -0.58
HDLBP-238	ENST00000479894	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.41	□□□□□ -0.58
HDLBP-238	ENST00000479894	SLC25A32	Q9H2D1	315 aa		11.41	□□□□□ -0.58
HDLBP-238	ENST00000479894	CLEC5A	Q9NY25	188 aa		11.41	□□□□□ -0.58
HDLBP-238	ENST00000479894	APLN	Q9ULZ1	77 aa		11.41	□□□□□ -0.58
HDLBP-238	ENST00000479894	HSPG2	P98160	4391 aa		11.41	□□□□□ -0.58
HDLBP-238	ENST00000479894	SPP1	P10451	314 aa		11.4	□□□□□ -0.58
HDLBP-238	ENST00000479894	KHDC3L	Q587J8	217 aa		11.4	□□□□□ -0.58
HDLBP-238	ENST00000479894	TMEM41B	Q5BJD5	291 aa		11.4	□□□□□ -0.58
HDLBP-238	ENST00000479894	C9orf62	Q8N4C0	152 aa		11.4	□□□□□ -0.58
HDLBP-238	ENST00000479894	C11orf45	Q8TAV5	145 aa		11.4	□□□□□ -0.58
HDLBP-238	ENST00000479894	LRRC20	Q8TCA0	184 aa		11.4	□□□□□ -0.58
HDLBP-238	ENST00000479894	SCRT1	Q9BWW7	348 aa		11.4	□□□□□ -0.58
HDLBP-238	ENST00000479894	MS4A6A	Q9H2W1	248 aa		11.4	□□□□□ -0.58
HDLBP-238	ENST00000479894	TMEM14C	Q9P0S9	112 aa		11.4	□□□□□ -0.58
HDLBP-238	ENST00000479894	EDN2	P20800	178 aa		11.39	□□□□□ -0.59
HDLBP-238	ENST00000479894	RAB5C	P51148	216 aa		11.39	□□□□□ -0.59
HDLBP-238	ENST00000479894	DPPA3	Q6W0C5	159 aa		11.39	□□□□□ -0.59
HDLBP-238	ENST00000479894	PQLC2	Q6ZP29	291 aa		11.39	□□□□□ -0.59
HDLBP-238	ENST00000479894	ISLR	O14498	428 aa		11.38	□□□□□ -0.59
HDLBP-238	ENST00000479894	NANOS2	P60321	138 aa	Known RBP	11.38	□□□□□ -0.59
HDLBP-238	ENST00000479894	CD300C	Q08708	224 aa		11.38	□□□□□ -0.59
HDLBP-238	ENST00000479894	LCN15	Q6UWW0	184 aa		11.38	□□□□□ -0.59
HDLBP-238	ENST00000479894	C11orf68	Q9H3H3	251 aa	Known RBP	11.38	□□□□□ -0.59
HDLBP-238	ENST00000479894	HRH4	Q9H3N8	390 aa		11.38	□□□□□ -0.59
HDLBP-238	ENST00000479894	IGKV3-7	A0A075B6H7	116 aa		11.37	□□□□□ -0.59
HDLBP-238	ENST00000479894		A0A087X0K7	114 aa		11.37	□□□□□ -0.59
HDLBP-238	ENST00000479894	RTL8C	O15255	209 aa		11.37	□□□□□ -0.59
HDLBP-238	ENST00000479894	ZNF253	O75346	499 aa		11.37	□□□□□ -0.59
HDLBP-238	ENST00000479894	HIST1H1E	P10412	219 aa	Known RBP	11.37	□□□□□ -0.59
HDLBP-238	ENST00000479894	CDC34	P49427	236 aa	Predicted RBP	11.37	□□□□□ -0.59
HDLBP-238	ENST00000479894	PSMB3	P49720	205 aa		11.37	□□□□□ -0.59
HDLBP-238	ENST00000479894	LEMD1	Q68G75	181 aa		11.37	□□□□□ -0.59
HDLBP-238	ENST00000479894	GBGT1	Q8N5D6	347 aa		11.37	□□□□□ -0.59
HDLBP-238	ENST00000479894	PHYHIPL	Q96FC7	376 aa		11.37	□□□□□ -0.59
HDLBP-238	ENST00000479894	SLC50A1	Q9BRV3	221 aa		11.37	□□□□□ -0.59
HDLBP-238	ENST00000479894	SH3BGRL3	Q9H299	93 aa		11.37	□□□□□ -0.59
HDLBP-238	ENST00000479894	HERC1	Q15751	4861 aa		11.36	□□□□□ -0.59
HDLBP-238	ENST00000479894		K7EQG2	157 aa		11.36	□□□□□ -0.59
HDLBP-238	ENST00000479894	TFPI2	P48307	235 aa		11.36	□□□□□ -0.59
HDLBP-238	ENST00000479894	PSG9	Q00887	426 aa		11.36	□□□□□ -0.59
HDLBP-238	ENST00000479894	PDE6H	Q13956	83 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 280.6 ms