RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 HIGD1AQ9Y241 93 aa4.89□□□□□ -1.63
SH3D19-207ENST00000478503 ACACBO00763 2458 aa4.89□□□□□ -1.63
SH3D19-207ENST00000478503 CUBNO60494 3623 aa4.89□□□□□ -1.63
SH3D19-207ENST00000478503 TRBV20OR9-2A0A075B6H5 130 aa4.89□□□□□ -1.63
SH3D19-207ENST00000478503 SPINK8P0C7L1 97 aa4.89□□□□□ -1.63
SH3D19-207ENST00000478503 CD99P14209 185 aa4.89□□□□□ -1.63
SH3D19-207ENST00000478503 VDAC2P45880 294 aaPredicted RBP4.89□□□□□ -1.63
SH3D19-207ENST00000478503 HCP5Q6MZN7 132 aa4.89□□□□□ -1.63
SH3D19-207ENST00000478503 C5orf17Q8NAS9 161 aa4.89□□□□□ -1.63
SH3D19-207ENST00000478503 OR4X1Q8NH49 305 aa4.89□□□□□ -1.63
SH3D19-207ENST00000478503 TMEM126AQ9H061 195 aa4.89□□□□□ -1.63
SH3D19-207ENST00000478503 SMDT1Q9H4I9 107 aa4.89□□□□□ -1.63
SH3D19-207ENST00000478503 SPANXB1Q9NS25 103 aaPredicted RBP4.89□□□□□ -1.63
SH3D19-207ENST00000478503 YTHDF2Q9Y5A9 579 aaKnown RBP4.89□□□□□ -1.63
SH3D19-207ENST00000478503 ITPR1Q14643 2758 aa4.89□□□□□ -1.63
SH3D19-207ENST00000478503 TRBV9A0A0B4J1U6 114 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 TRAV5A0A0B4J249 113 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 CSN3P07498 182 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 SAA1P0DJI8 122 aaPredicted RBP4.88□□□□□ -1.63
SH3D19-207ENST00000478503 TPSG1Q9NRR2 321 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 IGLV3-9A0A075B6K5 115 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 IGKV1OR2-108A0A075B7D4 117 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 FAM240AA0A1B0GVK7 77 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 FABP5P3A8MUU1 101 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 CD24P25063 80 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 OR10J1P30954 320 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 GNB2P62879 340 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 JOSD1Q15040 202 aaPredicted RBP4.88□□□□□ -1.63
SH3D19-207ENST00000478503 TMEM200BQ69YZ2 307 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 SSX8Q7RTT4 187 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 TEX29Q8N6K0 151 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 ZNF418Q8TF45 676 aaPredicted RBP4.88□□□□□ -1.63
SH3D19-207ENST00000478503 IMMP2LQ96T52 175 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 U3KQE9 123 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 VPS13CQ709C8 3753 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 PTPRBP23467 1997 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 PIGBOS1A0A0B4J2F0 54 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 LOC107984640A0A0U1RRK4 108 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.88□□□□□ -1.63
SH3D19-207ENST00000478503 COX7A1P24310 79 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 HSPE1P61604 102 aaKnown RBP4.88□□□□□ -1.63
SH3D19-207ENST00000478503 MEF2CQ06413 473 aaPredicted RBP4.88□□□□□ -1.63
SH3D19-207ENST00000478503 CYP2G1PQ6ZSU1 146 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 KIR3DL3Q8N743 410 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 C8orf46Q8TAG6 207 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 PLEKHA3Q9HB20 300 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 CREBBPQ92793 2442 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 PKD1L2Q7Z442 2459 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 A0A087WWC5 75 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 GRIFINA4D1Z8 144 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 C15orf61A6NNL5 157 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 HINT1P49773 126 aaPredicted RBP4.88□□□□□ -1.63
SH3D19-207ENST00000478503 FXYD3Q14802 87 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 CDSNQ15517 529 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 MORN5Q5VZ52 161 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 SPACA3Q8IXA5 215 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 LINC00479Q96M42 142 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 GPR82Q96P67 336 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 SFXN3Q9BWM7 321 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 PRSS22Q9GZN4 317 aa4.88□□□□□ -1.63
SH3D19-207ENST00000478503 CFAP46Q8IYW2 2715 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 CGB3P0DN86 165 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 CGB7P0DN87 165 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 CNTFRP26992 372 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 RUSC1-AS1Q66K80 236 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 TEPPQ6URK8 271 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 IGFL3Q6UXB1 125 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 SGMS2Q8NHU3 365 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 DDB2Q92466 427 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 NPVFQ9HCQ7 196 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 SIGLEC9Q9Y336 463 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 CSPG4Q6UVK1 2322 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 TEX50A0A1B0GTY4 177 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 hADV38S2A0JD32 116 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 CRYBB3P26998 211 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 GNG4P50150 75 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 RPS20P60866 119 aaKnown RBP4.87□□□□□ -1.63
SH3D19-207ENST00000478503 PNRC1Q12796 327 aaPredicted RBP4.87□□□□□ -1.63
SH3D19-207ENST00000478503 C11orf45Q8TAV5 145 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 COMMD5Q9GZQ3 224 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 AAMDCQ9H7C9 122 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 CTSZQ9UBR2 303 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 RPUSD1Q9UJJ7 312 aaKnown RBP4.87□□□□□ -1.63
SH3D19-207ENST00000478503 CYSLTR1Q9Y271 337 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 S4R3C0 116 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 IGF1P05019 195 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 PFN1P07737 140 aaKnown RBP4.87□□□□□ -1.63
SH3D19-207ENST00000478503 FAM162BQ5T6X4 162 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 APRG1Q8IVJ8 170 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 HIST3H2BBQ8N257 126 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 C3orf56Q8N813 242 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 OR2T10Q8NGZ9 312 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 MALSU1Q96EH3 234 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 TIMM9Q9Y5J7 89 aa4.87□□□□□ -1.63
SH3D19-207ENST00000478503 CELSR2Q9HCU4 2923 aa4.86□□□□□ -1.63
SH3D19-207ENST00000478503 RAI1Q7Z5J4 1906 aaPredicted RBP4.86□□□□□ -1.63
SH3D19-207ENST00000478503 MOSP00540 346 aa4.86□□□□□ -1.63
SH3D19-207ENST00000478503 HRASP01112 189 aa4.86□□□□□ -1.63
SH3D19-207ENST00000478503 MGST1P10620 155 aaKnown RBP4.86□□□□□ -1.63
SH3D19-207ENST00000478503 ZNF90Q03938 601 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms