RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TAS2R60P59551 318 aa10.25□□□□□ -0.77
SMARCE1-209ENST00000478349 BAP18Q8IXM2 172 aa10.25□□□□□ -0.77
SMARCE1-209ENST00000478349 ZBTB8BQ8NAP8 495 aaPredicted RBP10.25□□□□□ -0.77
SMARCE1-209ENST00000478349 MITD1Q8WV92 249 aa10.25□□□□□ -0.77
SMARCE1-209ENST00000478349 UHRF2Q96PU4 802 aa10.25□□□□□ -0.77
SMARCE1-209ENST00000478349 LINC01587Q99440 93 aa10.25□□□□□ -0.77
SMARCE1-209ENST00000478349 RBM38Q9H0Z9 239 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-209ENST00000478349 LINC00854A0A1B0GVQ3 168 aa10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 PMS2P5A8MQ11 134 aa10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 ZNF705GA8MUZ8 300 aaPredicted RBP10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 ATP5G1P05496 136 aa10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 DEFB130BP0DP73 79 aa10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 DEFB130AP0DP74 79 aa10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 CDKN1BP46527 198 aa10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 ATP5G3P48201 142 aa10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 SLC38A11Q08AI6 406 aa10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 BAK1Q16611 211 aa10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 ZNF493Q6ZR52 646 aa10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 RPUSD4Q96CM3 377 aaKnown RBP10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 C17orf77Q96MU5 243 aa10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 C20orf144Q9BQM9 153 aa10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 FLVCR2Q9UPI3 526 aa10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 HECTD4Q9Y4D8 3996 aa10.24□□□□□ -0.77
SMARCE1-209ENST00000478349 IGLV2-18A0A075B6J9 118 aa10.23□□□□□ -0.77
SMARCE1-209ENST00000478349 CRXO43186 299 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-209ENST00000478349 MED14OSP0DP75 135 aa10.23□□□□□ -0.77
SMARCE1-209ENST00000478349 PVALBP20472 110 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-209ENST00000478349 IGFL4Q6B9Z1 124 aa10.23□□□□□ -0.77
SMARCE1-209ENST00000478349 Q6ZRG5 221 aa10.23□□□□□ -0.77
SMARCE1-209ENST00000478349 LINC00305Q7Z4B0 112 aa10.23□□□□□ -0.77
SMARCE1-209ENST00000478349 OR10J6PQ8NGY7 276 aa10.23□□□□□ -0.77
SMARCE1-209ENST00000478349 TIMM8BQ9Y5J9 83 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-209ENST00000478349 PXMP4Q9Y6I8 212 aa10.23□□□□□ -0.77
SMARCE1-209ENST00000478349 TRAV12-2A0A075B6T6 113 aa10.22□□□□□ -0.77
SMARCE1-209ENST00000478349 F5H768 121 aa10.22□□□□□ -0.77
SMARCE1-209ENST00000478349 H7BYZ3 331 aa10.22□□□□□ -0.77
SMARCE1-209ENST00000478349 AGPAT2O15120 278 aa10.22□□□□□ -0.77
SMARCE1-209ENST00000478349 RTL8CO15255 209 aa10.22□□□□□ -0.77
SMARCE1-209ENST00000478349 IL7P13232 177 aa10.22□□□□□ -0.77
SMARCE1-209ENST00000478349 SMCPP49901 116 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-209ENST00000478349 GUK1Q16774 197 aa10.22□□□□□ -0.77
SMARCE1-209ENST00000478349 C1orf134Q5TEV5 83 aa10.22□□□□□ -0.77
SMARCE1-209ENST00000478349 C10orf113Q5VZT2 155 aa10.22□□□□□ -0.77
SMARCE1-209ENST00000478349 CCDC28AQ8IWP9 274 aa10.22□□□□□ -0.77
SMARCE1-209ENST00000478349 C20orf85Q9H1P6 137 aa10.22□□□□□ -0.77
SMARCE1-209ENST00000478349 RCL1Q9Y2P8 373 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-209ENST00000478349 A0A1B0GVY2 172 aa10.21□□□□□ -0.77
SMARCE1-209ENST00000478349 CBY3A6NI87 242 aa10.21□□□□□ -0.77
SMARCE1-209ENST00000478349 HTN1P15515 57 aa10.21□□□□□ -0.77
SMARCE1-209ENST00000478349 BCAP31P51572 246 aa10.21□□□□□ -0.77
SMARCE1-209ENST00000478349 CAV2P51636 162 aa10.21□□□□□ -0.77
SMARCE1-209ENST00000478349 CCL18P55774 89 aa10.21□□□□□ -0.77
SMARCE1-209ENST00000478349 Q6ZR54 194 aa10.21□□□□□ -0.77
SMARCE1-209ENST00000478349 OR1L4Q8NGR5 311 aa10.21□□□□□ -0.77
SMARCE1-209ENST00000478349 TMEM263Q8WUH6 116 aaKnown RBP10.21□□□□□ -0.77
SMARCE1-209ENST00000478349 PFDN5Q99471 154 aa10.21□□□□□ -0.77
SMARCE1-209ENST00000478349 ZNF331Q9NQX6 463 aaPredicted RBP10.21□□□□□ -0.77
SMARCE1-209ENST00000478349 C7orf66A4D0T2 115 aa10.2□□□□□ -0.78
SMARCE1-209ENST00000478349 FAM25EA8MYX2 175 aa10.2□□□□□ -0.78
SMARCE1-209ENST00000478349 CCNKO75909 580 aa10.2□□□□□ -0.78
SMARCE1-209ENST00000478349 MBPP02686 304 aaPredicted RBP10.2□□□□□ -0.78
SMARCE1-209ENST00000478349 BTCP35070 178 aa10.2□□□□□ -0.78
SMARCE1-209ENST00000478349 CAMLGP49069 296 aa10.2□□□□□ -0.78
SMARCE1-209ENST00000478349 CLINT1Q14677 625 aa10.2□□□□□ -0.78
SMARCE1-209ENST00000478349 C12orf45Q8N5I9 185 aaPredicted RBP10.2□□□□□ -0.78
SMARCE1-209ENST00000478349 VPS13DQ5THJ4 4388 aa10.19□□□□□ -0.78
SMARCE1-209ENST00000478349 DNAH6Q9C0G6 4158 aa10.19□□□□□ -0.78
SMARCE1-209ENST00000478349 C5orf51A6NDU8 294 aa10.19□□□□□ -0.78
SMARCE1-209ENST00000478349 LYRM1O43325 122 aa10.19□□□□□ -0.78
SMARCE1-209ENST00000478349 NUDT3O95989 172 aa10.19□□□□□ -0.78
SMARCE1-209ENST00000478349 LEPP41159 167 aa10.19□□□□□ -0.78
SMARCE1-209ENST00000478349 HBG1P69891 147 aa10.19□□□□□ -0.78
SMARCE1-209ENST00000478349 HBG2P69892 147 aa10.19□□□□□ -0.78
SMARCE1-209ENST00000478349 PATE2Q6UY27 113 aa10.19□□□□□ -0.78
SMARCE1-209ENST00000478349 STX12Q86Y82 276 aa10.19□□□□□ -0.78
SMARCE1-209ENST00000478349 UQCC1Q9NVA1 299 aa10.19□□□□□ -0.78
SMARCE1-209ENST00000478349 NDUFA13Q9P0J0 144 aa10.19□□□□□ -0.78
SMARCE1-209ENST00000478349 LSM5Q9Y4Y9 91 aaKnown RBP10.19□□□□□ -0.78
SMARCE1-209ENST00000478349 MRPS12O15235 138 aaKnown RBP10.18□□□□□ -0.78
SMARCE1-209ENST00000478349 ZNF431Q8TF32 576 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-209ENST00000478349 ODF3Q96PU9 254 aa10.18□□□□□ -0.78
SMARCE1-209ENST00000478349 MGST2Q99735 147 aa10.18□□□□□ -0.78
SMARCE1-209ENST00000478349 DNAJC4Q9NNZ3 241 aa10.18□□□□□ -0.78
SMARCE1-209ENST00000478349 DNAH10Q8IVF4 4471 aa10.17□□□□□ -0.78
SMARCE1-209ENST00000478349 SNURFLB1AK76 121 aa10.17□□□□□ -0.78
SMARCE1-209ENST00000478349 ZNF253O75346 499 aa10.17□□□□□ -0.78
SMARCE1-209ENST00000478349 RLN2P04090 185 aa10.17□□□□□ -0.78
SMARCE1-209ENST00000478349 TCRBP04435 133 aa10.17□□□□□ -0.78
SMARCE1-209ENST00000478349 AZU1P20160 251 aa10.17□□□□□ -0.78
SMARCE1-209ENST00000478349 S100A11P31949 105 aa10.17□□□□□ -0.78
SMARCE1-209ENST00000478349 RNASE8Q8TDE3 154 aaKnown RBP10.17□□□□□ -0.78
SMARCE1-209ENST00000478349 SDHCQ99643 169 aaPredicted RBP10.17□□□□□ -0.78
SMARCE1-209ENST00000478349 NOP10Q9NPE3 64 aaKnown RBP10.17□□□□□ -0.78
SMARCE1-209ENST00000478349 NUDT15Q9NV35 164 aa10.17□□□□□ -0.78
SMARCE1-209ENST00000478349 PLAC8L1A1L4L8 177 aa10.16□□□□□ -0.78
SMARCE1-209ENST00000478349 CCSO14618 274 aa10.16□□□□□ -0.78
SMARCE1-209ENST00000478349 IGLC2P0DOY2 106 aa10.16□□□□□ -0.78
SMARCE1-209ENST00000478349 SULT1A1P50225 295 aa10.16□□□□□ -0.78
SMARCE1-209ENST00000478349 S100A10P60903 97 aa10.16□□□□□ -0.78
SMARCE1-209ENST00000478349 BAXQ07812 192 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 950.4 ms