RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 MITD1Q8WV92 249 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 BORCS5Q969J3 196 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 TMEM230Q96A57 120 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 VCXQ9H320 206 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 SAV1Q9H4B6 383 aaPredicted RBP3.16□□□□□ -1.9
CKS1B-207ENST00000477676 NRN1Q9NPD7 142 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 IFT46Q9NQC8 304 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 DIABLOQ9NR28 239 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 SSR3Q9UNL2 185 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 STRAPQ9Y3F4 350 aaKnown RBP3.16□□□□□ -1.9
CKS1B-207ENST00000477676 LRP2P98164 4655 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 IGKV1D-37A0A075B6S9 117 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 A0A0J9YX75 114 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 hDV102S1A0JD36 115 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 TMEM189A5PLL7 270 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 ZNF705GA8MUZ8 300 aaPredicted RBP3.15□□□□□ -1.91
CKS1B-207ENST00000477676 IL4P05112 153 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 PRB4P10163 310 aaPredicted RBP3.15□□□□□ -1.91
CKS1B-207ENST00000477676 AZU1P20160 251 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 OR10J1P30954 320 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 PRSS3P35030 304 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 SNCAP37840 140 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 CDKN1BP46527 198 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 FHITP49789 147 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 RORCP51449 518 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 PAX9P55771 341 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 TAS2R46P59540 309 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 GABARAPL2P60520 117 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 YPEL3P61236 119 aaPredicted RBP3.15□□□□□ -1.91
CKS1B-207ENST00000477676 RND3P61587 244 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 DAD1P61803 113 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 UBE2NLQ5JXB2 153 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 FAM78BQ5VT40 261 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 SIGLEC15Q6ZMC9 328 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 FOXI2Q6ZQN5 318 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 Q6ZRN7 208 aaPredicted RBP3.15□□□□□ -1.91
CKS1B-207ENST00000477676 NRARPQ7Z6K4 114 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 AKAP14Q86UN6 197 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 CENPSQ8N2Z9 138 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 SLC35G3Q8N808 338 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 SAMD12Q8N8I0 201 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 OR4D10Q8NGI6 311 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 OR51G1Q8NGK1 321 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 OR1S2Q8NGQ3 325 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 OCC1Q8TAD7 63 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 GPR146Q96CH1 333 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 LINC00052Q96N35 136 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 SDF2L1Q9HCN8 221 aa3.15□□□□□ -1.91
CKS1B-207ENST00000477676 IGKV1OR2-108A0A075B7D4 117 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 FAM240BA0A1B0GVZ2 78 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 F8WDY8 70 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 M0R2Z0 102 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 CORTO00230 105 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 INAFM2P0DMQ5 153 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 S100A1P23297 94 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 UCP1P25874 307 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 HOXA1P49639 335 aaPredicted RBP3.14□□□□□ -1.91
CKS1B-207ENST00000477676 AP2S1P53680 142 aaPredicted RBP3.14□□□□□ -1.91
CKS1B-207ENST00000477676 PIGPP57054 158 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 SPCS3P61009 180 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 NUTF2P61970 127 aaKnown RBP3.14□□□□□ -1.91
CKS1B-207ENST00000477676 SNRPD3P62318 126 aaKnown RBP3.14□□□□□ -1.91
CKS1B-207ENST00000477676 PSG9Q00887 426 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 ZNF90Q03938 601 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 MEF2DQ14814 521 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 C2orf83Q53S99 150 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 TMEM69Q5SWH9 247 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 TMEM182Q6ZP80 229 aaPredicted RBP3.14□□□□□ -1.91
CKS1B-207ENST00000477676 ARRDC1Q8N5I2 433 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 C15orf53Q8NAA6 179 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 OR4B1Q8NGF8 309 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 Q8WTZ3 238 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 GLYATL2Q8WU03 294 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 S100A16Q96FQ6 103 aaKnown RBP3.14□□□□□ -1.91
CKS1B-207ENST00000477676 ACY3Q96HD9 319 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 VCX2Q9H322 139 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 TREM1Q9NP99 234 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 KLK11Q9UBX7 282 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 TMED3Q9Y3Q3 217 aa3.14□□□□□ -1.91
CKS1B-207ENST00000477676 TRAV30A0A087WSZ9 112 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 TRAV8-2A0A0B4J237 113 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 C3orf85A0A1B0GTC6 90 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 TEX48A0A1B0GUV7 120 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 PCP4L1A6NKN8 68 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 EPM2AB3EWF7 344 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 SCGB2A1O75556 95 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 CDS2O95674 445 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 HBE1P02100 147 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 CD3DP04234 171 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 RD3LP0DJH9 198 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 DEFB130BP0DP73 79 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 DEFB130AP0DP74 79 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 PSMB3P49720 205 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 AKR1C2P52895 323 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 SUB1P53999 127 aaKnown RBP eCLIP3.13□□□□□ -1.914e-57■■■■■ 205.6
CKS1B-207ENST00000477676 KRTAP10-1P60331 282 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 LSM3P62310 102 aaKnown RBP3.13□□□□□ -1.91
CKS1B-207ENST00000477676 NEDD8Q15843 81 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 ESRGQ1W209 222 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 RRN3P1Q2M238 152 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 212.8 ms