RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ST6GAL2Q96JF0 529 aa10.08□□□□□ -0.8
SMG5-204ENST00000476954 MRPL16Q9NX20 251 aaKnown RBP10.08□□□□□ -0.8
SMG5-204ENST00000476954 COPZ2Q9P299 210 aa10.08□□□□□ -0.8
SMG5-204ENST00000476954 SLC45A2Q9UMX9 530 aa10.08□□□□□ -0.8
SMG5-204ENST00000476954 LINC00854A0A1B0GVQ3 168 aa10.07□□□□□ -0.8
SMG5-204ENST00000476954 SPINK4O60575 86 aa10.07□□□□□ -0.8
SMG5-204ENST00000476954 GYPEP15421 78 aa10.07□□□□□ -0.8
SMG5-204ENST00000476954 SRIP30626 198 aa10.07□□□□□ -0.8
SMG5-204ENST00000476954 AQP4P55087 323 aa10.07□□□□□ -0.8
SMG5-204ENST00000476954 GLYATL2Q8WU03 294 aa10.07□□□□□ -0.8
SMG5-204ENST00000476954 TMEM222Q9H0R3 208 aa10.07□□□□□ -0.8
SMG5-204ENST00000476954 RBKSQ9H477 322 aa10.07□□□□□ -0.8
SMG5-204ENST00000476954 TMEM56-RWDD3S4R434 201 aa10.07□□□□□ -0.8
SMG5-204ENST00000476954 U3KQ87 197 aa10.07□□□□□ -0.8
SMG5-204ENST00000476954 TRAV5A0A0B4J249 113 aa10.06□□□□□ -0.8
SMG5-204ENST00000476954 H3BRN7 92 aa10.06□□□□□ -0.8
SMG5-204ENST00000476954 SNRPCP09234 159 aaKnown RBP10.06□□□□□ -0.8
SMG5-204ENST00000476954 UBE2NLQ5JXB2 153 aa10.06□□□□□ -0.8
SMG5-204ENST00000476954 SAMD12Q8N8I0 201 aa10.06□□□□□ -0.8
SMG5-204ENST00000476954 DTD1Q8TEA8 209 aa10.06□□□□□ -0.8
SMG5-204ENST00000476954 PYGO2Q9BRQ0 406 aa10.06□□□□□ -0.8
SMG5-204ENST00000476954 TMEM147Q9BVK8 224 aa10.06□□□□□ -0.8
SMG5-204ENST00000476954 TMEM268Q5VZI3 342 aa10.05□□□□□ -0.8
SMG5-204ENST00000476954 GGNBP1Q5YKI7 109 aa10.05□□□□□ -0.8
SMG5-204ENST00000476954 OR13C8Q8NGS7 320 aa10.05□□□□□ -0.8
SMG5-204ENST00000476954 RBPMSQ93062 196 aaKnown RBP10.05□□□□□ -0.8
SMG5-204ENST00000476954 IGHV3-38A0A0C4DH36 116 aa10.04□□□□□ -0.8
SMG5-204ENST00000476954 LOC100506127A0A0U1RQW1 187 aa10.04□□□□□ -0.8
SMG5-204ENST00000476954 CT45A10P0DMU9 189 aa10.04□□□□□ -0.8
SMG5-204ENST00000476954 SNX29P2Q8IUI4 249 aa10.04□□□□□ -0.8
SMG5-204ENST00000476954 CCDC71LQ8N9Z2 235 aa10.04□□□□□ -0.8
SMG5-204ENST00000476954 LRRC20Q8TCA0 184 aa10.04□□□□□ -0.8
SMG5-204ENST00000476954 ZNF431Q8TF32 576 aaPredicted RBP10.04□□□□□ -0.8
SMG5-204ENST00000476954 SHANK2-AS3Q9BTD1 123 aa10.04□□□□□ -0.8
SMG5-204ENST00000476954 MRPL32Q9BYC8 188 aaKnown RBP10.04□□□□□ -0.8
SMG5-204ENST00000476954 PRR13Q9NZ81 148 aa10.04□□□□□ -0.8
SMG5-204ENST00000476954 FAT4Q6V0I7 4981 aa10.03□□□□□ -0.8
SMG5-204ENST00000476954 A0A087X0K7 114 aa10.03□□□□□ -0.8
SMG5-204ENST00000476954 CFDP00746 253 aaPredicted RBP10.03□□□□□ -0.8
SMG5-204ENST00000476954 TEPPQ6URK8 271 aa10.03□□□□□ -0.8
SMG5-204ENST00000476954 BPIFCQ8NFQ6 507 aa10.03□□□□□ -0.8
SMG5-204ENST00000476954 VCXQ9H320 206 aa10.03□□□□□ -0.8
SMG5-204ENST00000476954 TEX13DA0A0J9YY54 714 aaPredicted RBP10.02□□□□□ -0.81
SMG5-204ENST00000476954 IGHV3-30P01768 117 aa10.02□□□□□ -0.81
SMG5-204ENST00000476954 IGHV3-33P01772 117 aa10.02□□□□□ -0.81
SMG5-204ENST00000476954 SFTA3P0C7M3 94 aa10.02□□□□□ -0.81
SMG5-204ENST00000476954 SULT1A3P0DMM9 295 aa10.02□□□□□ -0.81
SMG5-204ENST00000476954 SULT1A4P0DMN0 295 aa10.02□□□□□ -0.81
SMG5-204ENST00000476954 IGHV3-30-3P0DP02 117 aa10.02□□□□□ -0.81
SMG5-204ENST00000476954 IGHV3-30-5P0DP03 117 aa10.02□□□□□ -0.81
SMG5-204ENST00000476954 RPL7P18124 248 aaKnown RBP10.02□□□□□ -0.81
SMG5-204ENST00000476954 SLAQ13239 276 aa10.02□□□□□ -0.81
SMG5-204ENST00000476954 LINC01556Q5JQF7 62 aa10.02□□□□□ -0.81
SMG5-204ENST00000476954 ZNF680Q8NEM1 530 aa10.02□□□□□ -0.81
SMG5-204ENST00000476954 MARCH1Q8TCQ1 289 aa10.02□□□□□ -0.81
SMG5-204ENST00000476954 BLNKQ8WV28 456 aa10.02□□□□□ -0.81
SMG5-204ENST00000476954 VGLL1Q99990 258 aa10.02□□□□□ -0.81
SMG5-204ENST00000476954 HSPB7Q9UBY9 170 aa10.02□□□□□ -0.81
SMG5-204ENST00000476954 LOC100131303A0A0U1RQF7 123 aa10.01□□□□□ -0.81
SMG5-204ENST00000476954 H3BTX0 84 aa10.01□□□□□ -0.81
SMG5-204ENST00000476954 TGFBR1P36897 503 aa10.01□□□□□ -0.81
SMG5-204ENST00000476954 TCL1AP56279 114 aa10.01□□□□□ -0.81
SMG5-204ENST00000476954 ZBTB8BQ8NAP8 495 aaPredicted RBP10.01□□□□□ -0.81
SMG5-204ENST00000476954 OR4D10Q8NGI6 311 aa10.01□□□□□ -0.81
SMG5-204ENST00000476954 TP53TG3Q9ULZ0 132 aa10.01□□□□□ -0.81
SMG5-204ENST00000476954 TRGV4A0A0C4DH28 118 aa10□□□□□ -0.81
SMG5-204ENST00000476954 MRPS12O15235 138 aaKnown RBP10□□□□□ -0.81
SMG5-204ENST00000476954 IGLV2-11P01706 119 aa10□□□□□ -0.81
SMG5-204ENST00000476954 CD3DP04234 171 aa10□□□□□ -0.81
SMG5-204ENST00000476954 ACOT6Q3I5F7 207 aaPredicted RBP10□□□□□ -0.81
SMG5-204ENST00000476954 RNASE10Q5GAN6 216 aaKnown RBP10□□□□□ -0.81
SMG5-204ENST00000476954 ZFAND1Q8TCF1 268 aa10□□□□□ -0.81
SMG5-204ENST00000476954 BAALCQ8WXS3 180 aa10□□□□□ -0.81
SMG5-204ENST00000476954 ZNF479Q96JC4 524 aa10□□□□□ -0.81
SMG5-204ENST00000476954 NAA60Q9H7X0 242 aa10□□□□□ -0.81
SMG5-204ENST00000476954 ZNF331Q9NQX6 463 aaPredicted RBP10□□□□□ -0.81
SMG5-204ENST00000476954 PAIP2BQ9ULR5 123 aaKnown RBP10□□□□□ -0.81
SMG5-204ENST00000476954 RBFOX3A6NFN3 312 aa9.99□□□□□ -0.81
SMG5-204ENST00000476954 PMS2P5A8MQ11 134 aa9.99□□□□□ -0.81
SMG5-204ENST00000476954 SLC17A3O00476 420 aa9.99□□□□□ -0.81
SMG5-204ENST00000476954 B3GALNT1O75752 331 aa9.99□□□□□ -0.81
SMG5-204ENST00000476954 LEPP41159 167 aa9.99□□□□□ -0.81
SMG5-204ENST00000476954 GPR107Q5VW38 600 aa9.99□□□□□ -0.81
SMG5-204ENST00000476954 STEAP1BQ6NZ63 245 aa9.99□□□□□ -0.81
SMG5-204ENST00000476954 C9orf47Q6ZRZ4 202 aa9.99□□□□□ -0.81
SMG5-204ENST00000476954 EIF4E3Q8N5X7 224 aaKnown RBP9.99□□□□□ -0.81
SMG5-204ENST00000476954 OR1S1Q8NH92 325 aa9.99□□□□□ -0.81
SMG5-204ENST00000476954 PCNPQ8WW12 178 aaKnown RBP9.99□□□□□ -0.81
SMG5-204ENST00000476954 NRG4Q8WWG1 115 aa9.99□□□□□ -0.81
SMG5-204ENST00000476954 RTBDNQ9BSG5 229 aaPredicted RBP9.99□□□□□ -0.81
SMG5-204ENST00000476954 HIGD1AQ9Y241 93 aa9.99□□□□□ -0.81
SMG5-204ENST00000476954 IAPPP10997 89 aa9.98□□□□□ -0.81
SMG5-204ENST00000476954 CD300CQ08708 224 aa9.98□□□□□ -0.81
SMG5-204ENST00000476954 BTN1A1Q13410 526 aa9.98□□□□□ -0.81
SMG5-204ENST00000476954 ASAH1Q13510 395 aa9.98□□□□□ -0.81
SMG5-204ENST00000476954 ANXA2RQ3ZCQ2 193 aa9.98□□□□□ -0.81
SMG5-204ENST00000476954 SCGB2B2Q4G0G5 96 aa9.98□□□□□ -0.81
SMG5-204ENST00000476954 LELP1Q5T871 98 aa9.98□□□□□ -0.81
SMG5-204ENST00000476954 Q6ZQT7 251 aa9.98□□□□□ -0.81
SMG5-204ENST00000476954 Q8N3U1 123 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms