RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 LINC00052Q96N35 136 aa12.53□□□□□ -0.4
RPN1-202ENST00000476931 WFDC10AQ9H1F0 79 aa12.53□□□□□ -0.4
RPN1-202ENST00000476931 RPRMQ9NS64 109 aa12.53□□□□□ -0.4
RPN1-202ENST00000476931 A0A1B0GVG6 124 aa12.52□□□□□ -0.41
RPN1-202ENST00000476931 BCL2L11O43521 198 aa12.52□□□□□ -0.41
RPN1-202ENST00000476931 PDE6HQ13956 83 aa12.52□□□□□ -0.41
RPN1-202ENST00000476931 FAM167A-AS1Q96KT0 104 aa12.52□□□□□ -0.41
RPN1-202ENST00000476931 CITED4Q96RK1 184 aa12.52□□□□□ -0.41
RPN1-202ENST00000476931 OR51M1Q9H341 326 aa12.52□□□□□ -0.41
RPN1-202ENST00000476931 PSG9Q00887 426 aa12.51□□□□□ -0.41
RPN1-202ENST00000476931 HAGHQ16775 308 aa12.51□□□□□ -0.41
RPN1-202ENST00000476931 KHDC3LQ587J8 217 aa12.51□□□□□ -0.41
RPN1-202ENST00000476931 PQLC2Q6ZP29 291 aa12.51□□□□□ -0.41
RPN1-202ENST00000476931 SAT2Q96F10 170 aaPredicted RBP12.51□□□□□ -0.41
RPN1-202ENST00000476931 PAXXQ9BUH6 204 aa12.51□□□□□ -0.41
RPN1-202ENST00000476931 SLC25A2Q9BXI2 301 aa12.51□□□□□ -0.41
RPN1-202ENST00000476931 ZNF331Q9NQX6 463 aaPredicted RBP12.51□□□□□ -0.41
RPN1-202ENST00000476931 H3BQ15 152 aa12.5□□□□□ -0.41
RPN1-202ENST00000476931 NBEAP1P0C6P0 100 aa12.5□□□□□ -0.41
RPN1-202ENST00000476931 SEC11BP0C7V7 166 aa12.5□□□□□ -0.41
RPN1-202ENST00000476931 SPP1P10451 314 aa12.5□□□□□ -0.41
RPN1-202ENST00000476931 LGALSLQ3ZCW2 172 aaPredicted RBP12.5□□□□□ -0.41
RPN1-202ENST00000476931 ZFP69Q49AA0 526 aa12.5□□□□□ -0.41
RPN1-202ENST00000476931 TMEM41BQ5BJD5 291 aa12.5□□□□□ -0.41
RPN1-202ENST00000476931 EBLN2Q6P2I7 272 aa12.5□□□□□ -0.41
RPN1-202ENST00000476931 FOXI2Q6ZQN5 318 aa12.5□□□□□ -0.41
RPN1-202ENST00000476931 SBSPONQ8IVN8 264 aa12.5□□□□□ -0.41
RPN1-202ENST00000476931 RNF141Q8WVD5 230 aa12.5□□□□□ -0.41
RPN1-202ENST00000476931 CLUHP3Q96NS8 147 aa12.5□□□□□ -0.41
RPN1-202ENST00000476931 ZNF471Q9BX82 626 aaPredicted RBP12.5□□□□□ -0.41
RPN1-202ENST00000476931 ACTR3CQ9C0K3 210 aaPredicted RBP12.5□□□□□ -0.41
RPN1-202ENST00000476931 CSTL1Q9H114 145 aa12.5□□□□□ -0.41
RPN1-202ENST00000476931 ZMAT4Q9H898 229 aa12.5□□□□□ -0.41
RPN1-202ENST00000476931 RFNGQ9Y644 331 aa12.5□□□□□ -0.41
RPN1-202ENST00000476931 TRBV19A0A075B6N1 114 aa12.49□□□□□ -0.41
RPN1-202ENST00000476931 TRAV8-2A0A0B4J237 113 aa12.49□□□□□ -0.41
RPN1-202ENST00000476931 RAB2AP61019 212 aa12.49□□□□□ -0.41
RPN1-202ENST00000476931 NUTF2P61970 127 aaKnown RBP12.49□□□□□ -0.41
RPN1-202ENST00000476931 PSG3Q16557 428 aa12.49□□□□□ -0.41
RPN1-202ENST00000476931 ACTL10Q5JWF8 245 aa12.49□□□□□ -0.41
RPN1-202ENST00000476931 AKR1C8PQ5T2L2 129 aa12.49□□□□□ -0.41
RPN1-202ENST00000476931 EIF5AL1Q6IS14 154 aaKnown RBP12.49□□□□□ -0.41
RPN1-202ENST00000476931 MORN3Q6PF18 240 aaPredicted RBP12.49□□□□□ -0.41
RPN1-202ENST00000476931 BAP18Q8IXM2 172 aa12.49□□□□□ -0.41
RPN1-202ENST00000476931 RPP25LQ8N5L8 163 aaKnown RBP12.49□□□□□ -0.41
RPN1-202ENST00000476931 SH3BGRL3Q9H299 93 aa12.49□□□□□ -0.41
RPN1-202ENST00000476931 SAV1Q9H4B6 383 aaPredicted RBP12.49□□□□□ -0.41
RPN1-202ENST00000476931 ZNF586Q9NXT0 402 aa12.49□□□□□ -0.41
RPN1-202ENST00000476931 PRELID1Q9Y255 219 aa12.49□□□□□ -0.41
RPN1-202ENST00000476931 UMAD1C9J7I0 102 aa12.48□□□□□ -0.41
RPN1-202ENST00000476931 H3BMM0 161 aa12.48□□□□□ -0.41
RPN1-202ENST00000476931 OR7C2O60412 319 aa12.48□□□□□ -0.41
RPN1-202ENST00000476931 TPT1P13693 172 aaKnown RBP12.48□□□□□ -0.41
RPN1-202ENST00000476931 HLA-DRB4P13762 266 aa12.48□□□□□ -0.41
RPN1-202ENST00000476931 CDC34P49427 236 aaPredicted RBP12.48□□□□□ -0.41
RPN1-202ENST00000476931 ZNF124Q15973 351 aa12.48□□□□□ -0.41
RPN1-202ENST00000476931 FAM122CQ6P4D5 195 aa12.48□□□□□ -0.41
RPN1-202ENST00000476931 Q6ZWC4 215 aa12.48□□□□□ -0.41
RPN1-202ENST00000476931 TRPT1Q86TN4 253 aaKnown RBP12.48□□□□□ -0.41
RPN1-202ENST00000476931 LYPD1Q8N2G4 141 aa12.48□□□□□ -0.41
RPN1-202ENST00000476931 STOML3Q8TAV4 291 aa12.48□□□□□ -0.41
RPN1-202ENST00000476931 MRPL53Q96EL3 112 aaKnown RBP12.48□□□□□ -0.41
RPN1-202ENST00000476931 TM2D3Q9BRN9 247 aa12.48□□□□□ -0.41
RPN1-202ENST00000476931 HLA-DRB4X5D2U9 266 aa12.48□□□□□ -0.41
RPN1-202ENST00000476931 KNCNA6PVL3 124 aa12.47□□□□□ -0.41
RPN1-202ENST00000476931 DUSP14O95147 198 aaKnown RBP12.47□□□□□ -0.41
RPN1-202ENST00000476931 PYYP10082 97 aa12.47□□□□□ -0.41
RPN1-202ENST00000476931 RPL35AP18077 110 aaKnown RBP12.47□□□□□ -0.41
RPN1-202ENST00000476931 RAB24Q969Q5 203 aa12.47□□□□□ -0.41
RPN1-202ENST00000476931 FXYD5Q96DB9 178 aa12.47□□□□□ -0.41
RPN1-202ENST00000476931 ASCL2Q99929 193 aa12.47□□□□□ -0.41
RPN1-202ENST00000476931 SPATA25Q9BR10 227 aa12.47□□□□□ -0.41
RPN1-202ENST00000476931 AAMDCQ9H7C9 122 aa12.47□□□□□ -0.41
RPN1-202ENST00000476931 STAG3L2P0CL84 134 aa12.46□□□□□ -0.41
RPN1-202ENST00000476931 STAG3L3P0CL85 134 aa12.46□□□□□ -0.41
RPN1-202ENST00000476931 SLC51BQ86UW2 128 aa12.46□□□□□ -0.41
RPN1-202ENST00000476931 ZNF738Q8NE65 137 aa12.46□□□□□ -0.41
RPN1-202ENST00000476931 C20orf173Q96LM9 149 aa12.46□□□□□ -0.41
RPN1-202ENST00000476931 PRKDCP78527 4128 aaKnown RBP12.46□□□□□ -0.41
RPN1-202ENST00000476931 A0A0J9YX75 114 aa12.45□□□□□ -0.42
RPN1-202ENST00000476931 CXorf1O96002 111 aa12.45□□□□□ -0.42
RPN1-202ENST00000476931 IGFL4Q6B9Z1 124 aa12.45□□□□□ -0.42
RPN1-202ENST00000476931 BLNKQ8WV28 456 aa12.45□□□□□ -0.42
RPN1-202ENST00000476931 ZNF503Q96F45 646 aa12.45□□□□□ -0.42
RPN1-202ENST00000476931 C1QTNF4Q9BXJ3 329 aa12.45□□□□□ -0.42
RPN1-202ENST00000476931 TP53TG1Q9Y2A0 90 aa12.45□□□□□ -0.42
RPN1-202ENST00000476931 CTXND1A0A1B0GTU2 59 aa12.44□□□□□ -0.42
RPN1-202ENST00000476931 NDUFB4O95168 129 aa12.44□□□□□ -0.42
RPN1-202ENST00000476931 UBE2L3P68036 154 aaKnown RBP12.44□□□□□ -0.42
RPN1-202ENST00000476931 DPPA3Q6W0C5 159 aa12.44□□□□□ -0.42
RPN1-202ENST00000476931 RNF182Q8N6D2 247 aa12.44□□□□□ -0.42
RPN1-202ENST00000476931 RPUSD4Q96CM3 377 aaKnown RBP12.44□□□□□ -0.42
RPN1-202ENST00000476931 H3BTX0 84 aa12.43□□□□□ -0.42
RPN1-202ENST00000476931 SLC17A3O00476 420 aa12.43□□□□□ -0.42
RPN1-202ENST00000476931 SNRPCP09234 159 aaKnown RBP12.43□□□□□ -0.42
RPN1-202ENST00000476931 OR10J4P0C629 311 aa12.43□□□□□ -0.42
RPN1-202ENST00000476931 RAB5CP51148 216 aa12.43□□□□□ -0.42
RPN1-202ENST00000476931 CD300CQ08708 224 aa12.43□□□□□ -0.42
RPN1-202ENST00000476931 FAM74A1Q5RGS3 127 aa12.43□□□□□ -0.42
RPN1-202ENST00000476931 TMEM167BQ9NRX6 74 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms