RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 PPP1R35Q8TAP8 253 aa10.99□□□□□ -0.65
HDAC1-206ENST00000476391 NDUFA4L2Q9NRX3 87 aa10.99□□□□□ -0.65
HDAC1-206ENST00000476391 CENPVL3A0A0U1RRI6 287 aa10.98□□□□□ -0.65
HDAC1-206ENST00000476391 FCER1GP30273 86 aa10.98□□□□□ -0.65
HDAC1-206ENST00000476391 PRDX2P32119 198 aa10.98□□□□□ -0.65
HDAC1-206ENST00000476391 SUB1P53999 127 aaKnown RBP eCLIP10.98□□□□□ -0.654e-8■■■■□ 20.5
HDAC1-206ENST00000476391 LYRM7Q5U5X0 104 aa10.98□□□□□ -0.65
HDAC1-206ENST00000476391 MAPKAPK5-AS1Q8N8E1 139 aa10.98□□□□□ -0.65
HDAC1-206ENST00000476391 IGFLR1Q9H665 355 aa10.98□□□□□ -0.65
HDAC1-206ENST00000476391 RAB9BQ9NP90 201 aa10.98□□□□□ -0.65
HDAC1-206ENST00000476391 KIAA0100Q14667 2235 aaKnown RBP10.98□□□□□ -0.65
HDAC1-206ENST00000476391 A0A087WX48 190 aa10.98□□□□□ -0.65
HDAC1-206ENST00000476391 NPYP01303 97 aa10.98□□□□□ -0.65
HDAC1-206ENST00000476391 IGHG4P01861 327 aa10.98□□□□□ -0.65
HDAC1-206ENST00000476391 CKS2P33552 79 aa10.98□□□□□ -0.65
HDAC1-206ENST00000476391 TPPP3Q9BW30 176 aa10.98□□□□□ -0.65
HDAC1-206ENST00000476391 CHD9Q3L8U1 2897 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 IGHV1OR15-9A0A0B4J2B8 117 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 GAGE2BQ13066 116 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 DIAPH2-AS1Q14236 149 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 GAGE2EQ4V326 116 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 GOLT1AQ6ZVE7 132 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 PIP4P1Q86T03 277 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 GAGE2DQ9UEU5 116 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 DOCK7Q96N67 2140 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 PCNX2A6NKB5 2137 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 A0A1W2PQM1 296 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 SBSPONQ8IVN8 264 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 TMEM75Q8N9X5 138 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 MAP1LC3AQ9H492 121 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 CALYQ9NYX4 217 aa10.97□□□□□ -0.65
HDAC1-206ENST00000476391 Q6Q795 121 aa10.96□□□□□ -0.65
HDAC1-206ENST00000476391 RPEQ96AT9 228 aa10.96□□□□□ -0.65
HDAC1-206ENST00000476391 TMEM213A2RRL7 107 aa10.96□□□□□ -0.66
HDAC1-206ENST00000476391 CCDC179H3BU77 68 aa10.96□□□□□ -0.66
HDAC1-206ENST00000476391 J3KRW8 73 aa10.96□□□□□ -0.66
HDAC1-206ENST00000476391 SAA1P0DJI8 122 aaPredicted RBP10.96□□□□□ -0.66
HDAC1-206ENST00000476391 LEPP41159 167 aa10.96□□□□□ -0.66
HDAC1-206ENST00000476391 ASIPP42127 132 aa10.96□□□□□ -0.66
HDAC1-206ENST00000476391 TMEM240Q5SV17 173 aa10.96□□□□□ -0.66
HDAC1-206ENST00000476391 FOXC2Q99958 501 aa10.96□□□□□ -0.66
HDAC1-206ENST00000476391 FAM173AQ9BQD7 235 aa10.96□□□□□ -0.66
HDAC1-206ENST00000476391 SLC25A39Q9BZJ4 359 aaPredicted RBP10.96□□□□□ -0.66
HDAC1-206ENST00000476391 FSCN3Q9NQT6 498 aa10.96□□□□□ -0.66
HDAC1-206ENST00000476391 NCBP2LA6PVI3 153 aaKnown RBP10.95□□□□□ -0.66
HDAC1-206ENST00000476391 IGKV1-16P04430 117 aa10.95□□□□□ -0.66
HDAC1-206ENST00000476391 CCL11P51671 97 aa10.95□□□□□ -0.66
HDAC1-206ENST00000476391 LYZL1Q6UWQ5 148 aa10.95□□□□□ -0.66
HDAC1-206ENST00000476391 IFITM1P13164 125 aa10.95□□□□□ -0.66
HDAC1-206ENST00000476391 PSMB2P49721 201 aa10.95□□□□□ -0.66
HDAC1-206ENST00000476391 UBE2D3P61077 147 aa10.95□□□□□ -0.66
HDAC1-206ENST00000476391 UBE2D2P62837 147 aa10.95□□□□□ -0.66
HDAC1-206ENST00000476391 TTC32Q5I0X7 151 aa10.95□□□□□ -0.66
HDAC1-206ENST00000476391 LEAP2Q969E1 77 aa10.95□□□□□ -0.66
HDAC1-206ENST00000476391 PTH2Q96A98 100 aa10.95□□□□□ -0.66
HDAC1-206ENST00000476391 FBXL15Q9H469 300 aa10.95□□□□□ -0.66
HDAC1-206ENST00000476391 NXT2Q9NPJ8 142 aaKnown RBP10.95□□□□□ -0.66
HDAC1-206ENST00000476391 YAE1D1Q9NRH1 226 aa10.95□□□□□ -0.66
HDAC1-206ENST00000476391 COL6A3P12111 3177 aa10.95□□□□□ -0.66
HDAC1-206ENST00000476391 DOCK10Q96BY6 2186 aa10.94□□□□□ -0.66
HDAC1-206ENST00000476391 H3BTX0 84 aa10.94□□□□□ -0.66
HDAC1-206ENST00000476391 CGB3P0DN86 165 aa10.94□□□□□ -0.66
HDAC1-206ENST00000476391 CGB7P0DN87 165 aa10.94□□□□□ -0.66
HDAC1-206ENST00000476391 SLC25A45Q8N413 288 aa10.94□□□□□ -0.66
HDAC1-206ENST00000476391 KLF14Q8TD94 323 aaPredicted RBP10.94□□□□□ -0.66
HDAC1-206ENST00000476391 TRGV9Q99603 122 aa10.94□□□□□ -0.66
HDAC1-206ENST00000476391 ZNF71Q9NQZ8 489 aaPredicted RBP10.94□□□□□ -0.66
HDAC1-206ENST00000476391 TMEM160Q9NX00 188 aa10.94□□□□□ -0.66
HDAC1-206ENST00000476391 TRAV40A0A0B4J280 105 aa10.94□□□□□ -0.66
HDAC1-206ENST00000476391 MYMXA0A1B0GTQ4 84 aa10.94□□□□□ -0.66
HDAC1-206ENST00000476391 A8MWV9 139 aa10.94□□□□□ -0.66
HDAC1-206ENST00000476391 SNCGO76070 127 aa10.94□□□□□ -0.66
HDAC1-206ENST00000476391 CRIP1P50238 77 aa10.94□□□□□ -0.66
HDAC1-206ENST00000476391 Q71RC1 249 aaPredicted RBP10.94□□□□□ -0.66
HDAC1-206ENST00000476391 MRPL36Q9P0J6 103 aaKnown RBP10.94□□□□□ -0.66
HDAC1-206ENST00000476391 TMEM14CQ9P0S9 112 aa10.94□□□□□ -0.66
HDAC1-206ENST00000476391 TRBV20-1A0A075B6N2 111 aa10.93□□□□□ -0.66
HDAC1-206ENST00000476391 C17orf58Q2M2W7 97 aa10.93□□□□□ -0.66
HDAC1-206ENST00000476391 UTF1Q5T230 341 aa10.93□□□□□ -0.66
HDAC1-206ENST00000476391 SRSF8Q9BRL6 282 aaKnown RBP10.93□□□□□ -0.66
HDAC1-206ENST00000476391 IGKV1D-17A0A075B6S4 117 aa10.92□□□□□ -0.66
HDAC1-206ENST00000476391 IGHV3-48P01763 117 aa10.92□□□□□ -0.66
HDAC1-206ENST00000476391 WT1-ASQ06250 92 aa10.92□□□□□ -0.66
HDAC1-206ENST00000476391 Q6ZS52 159 aa10.92□□□□□ -0.66
HDAC1-206ENST00000476391 EXOC3-AS1Q8N2X6 119 aa10.92□□□□□ -0.66
HDAC1-206ENST00000476391 KIR2DL4Q99706 377 aa10.92□□□□□ -0.66
HDAC1-206ENST00000476391 TRANK1O15050 2925 aa10.92□□□□□ -0.66
HDAC1-206ENST00000476391 LOC107984156A0A0G2JMH3 177 aa10.92□□□□□ -0.66
HDAC1-206ENST00000476391 IGHV5-10-1A0A0J9YXX1 117 aa10.92□□□□□ -0.66
HDAC1-206ENST00000476391 PINLYPA6NC86 204 aa10.92□□□□□ -0.66
HDAC1-206ENST00000476391 SMKR1H3BMG3 65 aa10.92□□□□□ -0.66
HDAC1-206ENST00000476391 FCN3O75636 299 aa10.92□□□□□ -0.66
HDAC1-206ENST00000476391 ARL17AQ8IVW1 177 aa10.92□□□□□ -0.66
HDAC1-206ENST00000476391 MRPL35Q9NZE8 188 aaKnown RBP10.92□□□□□ -0.66
HDAC1-206ENST00000476391 FZR1Q9UM11 496 aa10.92□□□□□ -0.66
HDAC1-206ENST00000476391 LINC01549A6NIU2 74 aa10.91□□□□□ -0.66
HDAC1-206ENST00000476391 PLNP26678 52 aa10.91□□□□□ -0.66
HDAC1-206ENST00000476391 UBE2D1P51668 147 aa10.91□□□□□ -0.66
HDAC1-206ENST00000476391 ANXA2RQ3ZCQ2 193 aa10.91□□□□□ -0.66
HDAC1-206ENST00000476391 PRR30Q53SZ7 412 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms