RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 LOC102723996A0A087X1L8 192 aa9.5□□□□□ -0.89
U2AF1-209ENST00000475639 PPIFP30405 207 aaKnown RBP9.5□□□□□ -0.89
U2AF1-209ENST00000475639 TMEM126AQ9H061 195 aa9.5□□□□□ -0.89
U2AF1-209ENST00000475639 CHD7Q9P2D1 2997 aa9.5□□□□□ -0.89
U2AF1-209ENST00000475639 OVOL1O14753 267 aa9.49□□□□□ -0.89
U2AF1-209ENST00000475639 SMAD7O15105 426 aaKnown RBP9.49□□□□□ -0.89
U2AF1-209ENST00000475639 SAP30O75446 220 aa9.49□□□□□ -0.89
U2AF1-209ENST00000475639 SPINK8P0C7L1 97 aa9.49□□□□□ -0.89
U2AF1-209ENST00000475639 INAFM2P0DMQ5 153 aa9.49□□□□□ -0.89
U2AF1-209ENST00000475639 LCN12Q6JVE5 192 aa9.49□□□□□ -0.89
U2AF1-209ENST00000475639 IGKV1-12A0A0C4DH73 117 aa9.49□□□□□ -0.89
U2AF1-209ENST00000475639 IGKV1D-12P01611 117 aa9.49□□□□□ -0.89
U2AF1-209ENST00000475639 RASL11AQ6T310 242 aa9.49□□□□□ -0.89
U2AF1-209ENST00000475639 CCL19Q99731 98 aa9.49□□□□□ -0.89
U2AF1-209ENST00000475639 GAGE12BA1L429 117 aa9.49□□□□□ -0.89
U2AF1-209ENST00000475639 HOXD3P31249 432 aaPredicted RBP9.49□□□□□ -0.89
U2AF1-209ENST00000475639 CFHR5Q9BXR6 569 aa9.49□□□□□ -0.89
U2AF1-209ENST00000475639 TRAV8-3A0A0A6YYJ7 113 aa9.49□□□□□ -0.89
U2AF1-209ENST00000475639 TIMP3P35625 211 aa9.49□□□□□ -0.89
U2AF1-209ENST00000475639 ACP7Q6ZNF0 438 aa9.49□□□□□ -0.89
U2AF1-209ENST00000475639 SLC25A48Q6ZT89 311 aaKnown RBP9.49□□□□□ -0.89
U2AF1-209ENST00000475639 H3BMM0 161 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 NBR2O15453 112 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 CELA2AP08217 269 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 TSKUQ8WUA8 353 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 FAM168AQ92567 244 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 NAA38Q9BRA0 125 aaKnown RBP9.48□□□□□ -0.89
U2AF1-209ENST00000475639 MYMXA0A1B0GTQ4 84 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 A0A1W2PRX2 142 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 PCOLCEQ15113 449 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 GAGE2AQ6NT46 116 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 TMEM190Q8WZ59 177 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 WDFY3Q8IZQ1 3526 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 THADAQ6YHU6 1953 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 IGHV1-45A0A0A0MS14 117 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 PSCAO43653 123 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 LAGE3Q14657 143 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 KLF17Q5JT82 389 aaPredicted RBP9.48□□□□□ -0.89
U2AF1-209ENST00000475639 PRIMA1Q86XR5 153 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 FAM216BQ8N7L0 139 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 LINC00312Q9Y6C7 94 aa9.48□□□□□ -0.89
U2AF1-209ENST00000475639 LEPROTO15243 131 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 DAZAP2Q15038 168 aaPredicted RBP9.47□□□□□ -0.89
U2AF1-209ENST00000475639 MPV17L2Q567V2 206 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 C1orf122Q6ZSJ8 110 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 GTSCR1Q86UQ5 136 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 SAA2-SAA4A0A096LPE2 208 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 SOCS3O14543 225 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 RSPO1Q2MKA7 263 aaPredicted RBP9.47□□□□□ -0.89
U2AF1-209ENST00000475639 C1orf159Q96HA4 380 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 IGLL1P15814 213 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 EVI2AP22794 236 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 C3orf36Q3SXR2 165 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 NRN1LQ496H8 165 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 OCC1Q8TAD7 63 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 UBL5Q9BZL1 73 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 UPK2O00526 184 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 TCTEX1D4Q5JR98 221 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 IMMP1LQ96LU5 166 aa9.47□□□□□ -0.89
U2AF1-209ENST00000475639 GNG5P63218 68 aa9.46□□□□□ -0.89
U2AF1-209ENST00000475639 LINC01560Q8TB33 94 aa9.46□□□□□ -0.89
U2AF1-209ENST00000475639 SORL1Q92673 2214 aa9.46□□□□□ -0.89
U2AF1-209ENST00000475639 VCYO14598 125 aa9.46□□□□□ -0.89
U2AF1-209ENST00000475639 FOXL2P58012 376 aa9.46□□□□□ -0.89
U2AF1-209ENST00000475639 SPANXDQ9BXN6 97 aa9.46□□□□□ -0.89
U2AF1-209ENST00000475639 PSG7Q13046 419 aa9.46□□□□□ -0.9
U2AF1-209ENST00000475639 IGKV1-39P01597 117 aa9.46□□□□□ -0.9
U2AF1-209ENST00000475639 IGKV1D-39P04432 117 aa9.46□□□□□ -0.9
U2AF1-209ENST00000475639 Q6ZSR3 168 aa9.46□□□□□ -0.9
U2AF1-209ENST00000475639 FAM90A1Q86YD7 464 aa9.46□□□□□ -0.9
U2AF1-209ENST00000475639 C2orf16Q68DN1 1984 aa9.45□□□□□ -0.9
U2AF1-209ENST00000475639 TCRBV4S1A1TA0A5B7 111 aa9.45□□□□□ -0.9
U2AF1-209ENST00000475639 C9JAW5 83 aa9.45□□□□□ -0.9
U2AF1-209ENST00000475639 OR9G9P0C7N8 305 aa9.45□□□□□ -0.9
U2AF1-209ENST00000475639 NPC2P61916 151 aa9.45□□□□□ -0.9
U2AF1-209ENST00000475639 TFF2Q03403 129 aa9.45□□□□□ -0.9
U2AF1-209ENST00000475639 UBE2WQ96B02 151 aa9.45□□□□□ -0.9
U2AF1-209ENST00000475639 IQCF6A8MYZ5 107 aa9.45□□□□□ -0.9
U2AF1-209ENST00000475639 GUSBP1Q15486 140 aa9.45□□□□□ -0.9
U2AF1-209ENST00000475639 ZC2HC1BQ5TFG8 222 aa9.45□□□□□ -0.9
U2AF1-209ENST00000475639 WFDC12Q8WWY7 111 aa9.45□□□□□ -0.9
U2AF1-209ENST00000475639 CECR9P0C854 216 aa9.45□□□□□ -0.9
U2AF1-209ENST00000475639 CELA3BP08861 270 aa9.44□□□□□ -0.9
U2AF1-209ENST00000475639 ZC2HC1AQ96GY0 325 aa9.44□□□□□ -0.9
U2AF1-209ENST00000475639 WDR83OSQ9Y284 106 aa9.44□□□□□ -0.9
U2AF1-209ENST00000475639 IGKV1-6A0A0C4DH72 117 aa9.44□□□□□ -0.9
U2AF1-209ENST00000475639 H0YJW9 148 aa9.44□□□□□ -0.9
U2AF1-209ENST00000475639 PYYP10082 97 aa9.44□□□□□ -0.9
U2AF1-209ENST00000475639 HAMPP81172 84 aa9.44□□□□□ -0.9
U2AF1-209ENST00000475639 DEFB125Q8N687 156 aa9.44□□□□□ -0.9
U2AF1-209ENST00000475639 LY6G5BQ8NDX9 201 aa9.44□□□□□ -0.9
U2AF1-209ENST00000475639 MRAPQ8TCY5 172 aa9.44□□□□□ -0.9
U2AF1-209ENST00000475639 K7EN84 100 aa9.44□□□□□ -0.9
U2AF1-209ENST00000475639 DUTP33316 252 aaKnown RBP9.44□□□□□ -0.9
U2AF1-209ENST00000475639 TMEM258P61165 79 aa9.44□□□□□ -0.9
U2AF1-209ENST00000475639 IGKV1-5P01602 117 aa9.44□□□□□ -0.9
U2AF1-209ENST00000475639 SELENOKQ9Y6D0 94 aa9.44□□□□□ -0.9
U2AF1-209ENST00000475639 CD5LO43866 347 aa9.43□□□□□ -0.9
U2AF1-209ENST00000475639 EFNA2O43921 213 aa9.43□□□□□ -0.9
U2AF1-209ENST00000475639 PAX8Q06710 450 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms