RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, human

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF1-204	ENST00000474020	GFRA4	Q9GZZ7	299 aa		4.64	□□□□□ -1.67
ATPAF1-204	ENST00000474020	NAGK	Q9UJ70	344 aa		4.64	□□□□□ -1.67
ATPAF1-204	ENST00000474020	TNFRSF18	Q9Y5U5	241 aa		4.64	□□□□□ -1.67
ATPAF1-204	ENST00000474020	SPTA1	P02549	2419 aa		4.64	□□□□□ -1.67
ATPAF1-204	ENST00000474020	CFAP46	Q8IYW2	2715 aa		4.64	□□□□□ -1.67
ATPAF1-204	ENST00000474020	KALRN	O60229	2985 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	IGHV2-70D	A0A0C4DH43	119 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020		A0A1B0GW15	77 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020		A0A1W2PRD5	423 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020		A0A1W2PRF3	423 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020		A0A1W2PRM7	423 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	FAM231B	A6NCW3	169 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020		A6NNC1	897 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	LINC00587	B1AMM8	73 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020		H3BRN7	92 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	BMPR1B	O00238	502 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	CHEK1	O14757	476 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	ZNF253	O75346	499 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	LTA	P01374	205 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	IL4	P05112	153 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	ESD	P10768	282 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	RPL7	P18124	248 aa	Known RBP	4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	RAB4A	P20338	218 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	DDT	P30046	118 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	CDKN1A	P38936	164 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	MYCNOS	P40205	109 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	UBE2E1	P51965	193 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	MFAP2	P55001	183 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	HBB	P68871	147 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	KLRD1	Q13241	179 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	PDE6H	Q13956	83 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	MRGPRG-AS1	Q2M3A8	158 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	LBH	Q53QV2	105 aa	Predicted RBP	4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	MORN5	Q5VZ52	161 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020		Q6AWC8	147 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	MRPL54	Q6P161	138 aa	Known RBP	4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020		Q86TA4	180 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	TTC9C	Q8N5M4	171 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	NHLRC2	Q8NBF2	726 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	KCNS1	Q96KK3	526 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	PIMREG	Q9BSJ6	248 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	PRORY	Q9H606	182 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	C21orf62	Q9NYP8	219 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	MRPL36	Q9P0J6	103 aa	Known RBP	4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	ZFP30	Q9Y2G7	519 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	KLF12	Q9Y4X4	402 aa		4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	TET2	Q6N021	2002 aa	Predicted RBP	4.63	□□□□□ -1.67
ATPAF1-204	ENST00000474020	AKAP13	Q12802	2813 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	TRBV19	A0A075B6N1	114 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	TRAV34	A0A0B4J273	112 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020		K7EIM0	57 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	SPINK4	O60575	86 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	SERF1A	O75920	110 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	IGLV2-8	P01709	118 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	GZMB	P10144	247 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	FCGR2B	P31994	310 aa	Predicted RBP	4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	AMT	P48728	403 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	GNG5	P63218	68 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	PRB3	Q04118	309 aa	Predicted RBP	4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	RIG	Q13278	110 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	LY6D	Q14210	128 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	EBI3	Q14213	229 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	UNQ5815/PRO19632	Q6UWF5	114 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	TMEM136	Q6ZRR5	245 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	C19orf35	Q6ZS72	473 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	GOLT1A	Q6ZVE7	132 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	CIART	Q8N365	385 aa	Predicted RBP	4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	ARL6IP6	Q8N6S5	226 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	TMEM75	Q8N9X5	138 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	VN1R17P	Q8TDU5	208 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	ITLN2	Q8WWU7	325 aa	Predicted RBP	4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	NDFIP1	Q9BT67	221 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	SIRPD	Q9H106	197 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	MRPL27	Q9P0M9	148 aa	Known RBP	4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	RABAC1	Q9UI14	185 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	ITPR3	Q14573	2671 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	ICE1	Q9Y2F5	2266 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	LAMA5	O15230	3695 aa		4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	SPTAN1	Q13813	2472 aa	Known RBP	4.62	□□□□□ -1.67
ATPAF1-204	ENST00000474020	IGLV11-55	A0A075B6I3	123 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	C20orf202	A1L168	122 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	GRIFIN	A4D1Z8	144 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	HIGD1C	A8MV81	97 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	NDUFS8	O00217	210 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	HSBP1	O75506	76 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	LY6H	O94772	140 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	NDUFB8	O95169	186 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	IGKV1-17	P01599	117 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	SRI	P30626	198 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	DLX1	P56177	255 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	RPS20	P60866	119 aa	Known RBP	4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	REL	Q04864	619 aa	Predicted RBP	4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	C9orf152	Q5JTZ5	239 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	SAPCD1	Q5SSQ6	148 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	CLEC2A	Q6UVW9	174 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	TOMM20L	Q6UXN7	152 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	LHFPL4	Q7Z7J7	247 aa		4.61	□□□□□ -1.67
ATPAF1-204	ENST00000474020	PRNT	Q86SH4	94 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 71 ms