RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 PAXXQ9BUH6 204 aa6.83□□□□□ -1.32
SMG5-203ENST00000473643 UBQLN2Q9UHD9 624 aa6.83□□□□□ -1.32
SMG5-203ENST00000473643 TENM3Q9P273 2699 aa6.83□□□□□ -1.32
SMG5-203ENST00000473643 MAP1LC3B2A6NCE7 125 aa6.82□□□□□ -1.32
SMG5-203ENST00000473643 ZNF785A8K8V0 405 aa6.82□□□□□ -1.32
SMG5-203ENST00000473643 ZNF705EA8MWA4 302 aaPredicted RBP6.82□□□□□ -1.32
SMG5-203ENST00000473643 H3BQ15 152 aa6.82□□□□□ -1.32
SMG5-203ENST00000473643 ZNF253O75346 499 aa6.82□□□□□ -1.32
SMG5-203ENST00000473643 EIF3GO75821 320 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMG5-203ENST00000473643 NBEAP1P0C6P0 100 aa6.82□□□□□ -1.32
SMG5-203ENST00000473643 PYYP10082 97 aa6.82□□□□□ -1.32
SMG5-203ENST00000473643 LCN15Q6UWW0 184 aa6.82□□□□□ -1.32
SMG5-203ENST00000473643 TMEM61Q8N0U2 210 aa6.82□□□□□ -1.32
SMG5-203ENST00000473643 DCANP1Q8TF63 244 aa6.82□□□□□ -1.32
SMG5-203ENST00000473643 SFT2D1Q8WV19 159 aa6.82□□□□□ -1.32
SMG5-203ENST00000473643 SPAG8Q99932 426 aaPredicted RBP6.82□□□□□ -1.32
SMG5-203ENST00000473643 B9D2Q9BPU9 175 aa6.82□□□□□ -1.32
SMG5-203ENST00000473643 MAP1LC3BQ9GZQ8 125 aa6.82□□□□□ -1.32
SMG5-203ENST00000473643 NRN1Q9NPD7 142 aa6.82□□□□□ -1.32
SMG5-203ENST00000473643 TMEM167BQ9NRX6 74 aa6.82□□□□□ -1.32
SMG5-203ENST00000473643 TRBV19A0A075B6N1 114 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 TEX46H3BTG2 121 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 SOCS3O14543 225 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 RGS13O14921 159 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 HMGB3O15347 200 aaKnown RBP6.81□□□□□ -1.32
SMG5-203ENST00000473643 OR7C2O60412 319 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 HBE1P02100 147 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 ARL14EPLP0DKL9 152 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 GCHFRP30047 84 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 PSMB3P49720 205 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 PAFAH1B2P68402 229 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 PDE6HQ13956 83 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 SAMD13Q5VXD3 122 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 LCN12Q6JVE5 192 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 RBPMS2Q6ZRY4 209 aaKnown RBP6.81□□□□□ -1.32
SMG5-203ENST00000473643 MS4A6AQ9H2W1 248 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 ZNF586Q9NXT0 402 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 SORL1Q92673 2214 aa6.81□□□□□ -1.32
SMG5-203ENST00000473643 IZUMO1RA6ND01 250 aa6.8□□□□□ -1.32
SMG5-203ENST00000473643 K7EQG2 157 aa6.8□□□□□ -1.32
SMG5-203ENST00000473643 NDUFB4O95168 129 aa6.8□□□□□ -1.32
SMG5-203ENST00000473643 NMBP08949 121 aa6.8□□□□□ -1.32
SMG5-203ENST00000473643 OR10J4P0C629 311 aa6.8□□□□□ -1.32
SMG5-203ENST00000473643 ATF4P18848 351 aaPredicted RBP6.8□□□□□ -1.32
SMG5-203ENST00000473643 PPT1P50897 306 aa6.8□□□□□ -1.32
SMG5-203ENST00000473643 FGF8P55075 233 aaPredicted RBP6.8□□□□□ -1.32
SMG5-203ENST00000473643 RPL11P62913 178 aaKnown RBP6.8□□□□□ -1.32
SMG5-203ENST00000473643 UBE2L3P68036 154 aaKnown RBP6.8□□□□□ -1.32
SMG5-203ENST00000473643 LYPD1Q8N2G4 141 aa6.8□□□□□ -1.32
SMG5-203ENST00000473643 PRR25Q96S07 402 aa6.8□□□□□ -1.32
SMG5-203ENST00000473643 SLC50A1Q9BRV3 221 aa6.8□□□□□ -1.32
SMG5-203ENST00000473643 TMPRSS5Q9H3S3 457 aa6.8□□□□□ -1.32
SMG5-203ENST00000473643 ZNF331Q9NQX6 463 aaPredicted RBP6.8□□□□□ -1.32
SMG5-203ENST00000473643 CLEC5AQ9NY25 188 aa6.8□□□□□ -1.32
SMG5-203ENST00000473643 ZNF256Q9Y2P7 627 aaPredicted RBP6.8□□□□□ -1.32
SMG5-203ENST00000473643 STAB2Q8WWQ8 2551 aa6.79□□□□□ -1.32
SMG5-203ENST00000473643 TRAV8-2A0A0B4J237 113 aa6.79□□□□□ -1.32
SMG5-203ENST00000473643 A0A1W2PRE2 83 aa6.79□□□□□ -1.32
SMG5-203ENST00000473643 OR4C46A6NHA9 309 aa6.79□□□□□ -1.32
SMG5-203ENST00000473643 DNASE2O00115 360 aaPredicted RBP6.79□□□□□ -1.32
SMG5-203ENST00000473643 ISLRO14498 428 aa6.79□□□□□ -1.32
SMG5-203ENST00000473643 CCL20P78556 96 aa6.79□□□□□ -1.32
SMG5-203ENST00000473643 PSG9Q00887 426 aa6.79□□□□□ -1.32
SMG5-203ENST00000473643 CLLU1Q5K131 121 aa6.79□□□□□ -1.32
SMG5-203ENST00000473643 ARL6IP6Q8N6S5 226 aa6.79□□□□□ -1.32
SMG5-203ENST00000473643 FAM110AQ9BQ89 295 aa6.79□□□□□ -1.32
SMG5-203ENST00000473643 SELENOKQ9Y6D0 94 aa6.79□□□□□ -1.32
SMG5-203ENST00000473643 ARL2-SNX15V9GYD0 113 aa6.79□□□□□ -1.32
SMG5-203ENST00000473643 IGKV3-7A0A075B6H7 116 aa6.78□□□□□ -1.32
SMG5-203ENST00000473643 SLC17A3O00476 420 aa6.78□□□□□ -1.32
SMG5-203ENST00000473643 SNRPCP09234 159 aaKnown RBP6.78□□□□□ -1.32
SMG5-203ENST00000473643 NHLRC4P0CG21 123 aaPredicted RBP6.78□□□□□ -1.32
SMG5-203ENST00000473643 ID1P41134 155 aa6.78□□□□□ -1.32
SMG5-203ENST00000473643 CMC4P56277 68 aaPredicted RBP6.78□□□□□ -1.32
SMG5-203ENST00000473643 RAB14P61106 215 aa6.78□□□□□ -1.32
SMG5-203ENST00000473643 GBGT1Q8N5D6 347 aa6.78□□□□□ -1.32
SMG5-203ENST00000473643 NKX6-2Q9C056 277 aaPredicted RBP6.78□□□□□ -1.32
SMG5-203ENST00000473643 FAM74A7A6NL05 159 aa6.77□□□□□ -1.33
SMG5-203ENST00000473643 H3BTX0 84 aa6.77□□□□□ -1.33
SMG5-203ENST00000473643 TAGLN2P37802 199 aaKnown RBP6.77□□□□□ -1.33
SMG5-203ENST00000473643 RANP62826 216 aaKnown RBP6.77□□□□□ -1.33
SMG5-203ENST00000473643 GUCA2BQ16661 112 aa6.77□□□□□ -1.33
SMG5-203ENST00000473643 WFDC3Q8IUB2 231 aa6.77□□□□□ -1.33
SMG5-203ENST00000473643 CCDC28AQ8IWP9 274 aa6.77□□□□□ -1.33
SMG5-203ENST00000473643 FAM24BQ8N5W8 94 aa6.77□□□□□ -1.33
SMG5-203ENST00000473643 BLNKQ8WV28 456 aa6.77□□□□□ -1.33
SMG5-203ENST00000473643 MRPL53Q96EL3 112 aaKnown RBP6.77□□□□□ -1.33
SMG5-203ENST00000473643 C16orf92Q96LL3 132 aa6.77□□□□□ -1.33
SMG5-203ENST00000473643 MANBALQ9NQG1 85 aa6.77□□□□□ -1.33
SMG5-203ENST00000473643 OTORQ9NRC9 128 aa6.77□□□□□ -1.33
SMG5-203ENST00000473643 C19orf73Q9NVV2 129 aa6.77□□□□□ -1.33
SMG5-203ENST00000473643 PRELID1Q9Y255 219 aa6.77□□□□□ -1.33
SMG5-203ENST00000473643 RYR3Q15413 4870 aa6.77□□□□□ -1.33
SMG5-203ENST00000473643 A0A1B0GV50 99 aa6.76□□□□□ -1.33
SMG5-203ENST00000473643 PGPA6NDG6 321 aa6.76□□□□□ -1.33
SMG5-203ENST00000473643 NDUFS6O75380 124 aaKnown RBP6.76□□□□□ -1.33
SMG5-203ENST00000473643 TFPI2P48307 235 aa6.76□□□□□ -1.33
SMG5-203ENST00000473643 SNRPD3P62318 126 aaKnown RBP6.76□□□□□ -1.33
SMG5-203ENST00000473643 PSG3Q16557 428 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms