RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 RITA1Q96K30 269 aa10.5□□□□□ -0.73
SCAMP4-207ENST00000472442 NAV3Q8IVL0 2385 aa10.5□□□□□ -0.73
SCAMP4-207ENST00000472442 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.5□□□□□ -0.73
SCAMP4-207ENST00000472442 LTAP01374 205 aa10.5□□□□□ -0.73
SCAMP4-207ENST00000472442 SEC11AP67812 179 aa10.5□□□□□ -0.73
SCAMP4-207ENST00000472442 UFSP1Q6NVU6 142 aa10.5□□□□□ -0.73
SCAMP4-207ENST00000472442 NEU4Q8WWR8 484 aaPredicted RBP10.5□□□□□ -0.73
SCAMP4-207ENST00000472442 ZNF492Q9P255 531 aa10.5□□□□□ -0.73
SCAMP4-207ENST00000472442 PPIAL4CA0A0B4J2A2 164 aa10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 IGLV1-47P01700 117 aa10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 IGLV2-23P01705 113 aa10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 PPIAL4GP0DN37 164 aa10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 Q71RC1 249 aaPredicted RBP10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 OR4C13Q8NGP0 309 aa10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 AP1S3Q96PC3 154 aa10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 C19orf84I3L1E1 186 aa10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 APOHP02749 345 aaPredicted RBP10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 NBEAP1P0C6P0 100 aa10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 TCTAP57738 103 aa10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 DTX2Q86UW9 622 aa10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 FMC1Q96HJ9 113 aa10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 GFRA4Q9GZZ7 299 aa10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 CFAP46Q8IYW2 2715 aa10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 SVEP1Q4LDE5 3571 aa10.49□□□□□ -0.73
SCAMP4-207ENST00000472442 ASH1LQ9NR48 2969 aaKnown RBP10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 TRAV8-1A0A0A6YYK1 113 aa10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 C22orf46C9J442 243 aa10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 H3BUT2 72 aa10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 COL8A1P27658 744 aa10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 GTF2H5Q6ZYL4 71 aa10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 C8orf46Q8TAG6 207 aa10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 PERPQ96FX8 193 aa10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 ZNF747Q9BV97 191 aa10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 AP5S1Q9NUS5 200 aa10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 HILPDAQ9Y5L2 63 aa10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 TCRAP04437 139 aa10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 RUSC1-AS1Q66K80 236 aa10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 CIARTQ8N365 385 aaPredicted RBP10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 C5orf17Q8NAS9 161 aa10.48□□□□□ -0.73
SCAMP4-207ENST00000472442 IGHV3-72A0A0B4J1Y9 119 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 CGB1A6NKQ9 187 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 LY6G5BQ8NDX9 201 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 STXBP6Q8NFX7 210 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 RABAC1Q9UI14 185 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 C9orf118A6NHY6 69 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 FGF6P10767 208 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 MRGPRG-AS1Q2M3A8 158 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 THAP8Q8NA92 274 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 TMEM116Q8NCL8 245 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 Q9H3A6 140 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 ARHGAP32A7KAX9 2087 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 HAX1O00165 279 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 NDUFS7O75251 213 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 PAX2Q02962 417 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 TMEM167AQ8TBQ9 72 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 TNFRSF14Q92956 283 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 TPSG1Q9NRR2 321 aa10.47□□□□□ -0.73
SCAMP4-207ENST00000472442 G3V4G9 280 aa10.46□□□□□ -0.73
SCAMP4-207ENST00000472442 BUB1B-PAK6H3BSN5 160 aa10.46□□□□□ -0.73
SCAMP4-207ENST00000472442 NPIPB6E9PJ23 425 aa10.46□□□□□ -0.74
SCAMP4-207ENST00000472442 H3BRM9 83 aa10.46□□□□□ -0.74
SCAMP4-207ENST00000472442 K7EP34 96 aa10.46□□□□□ -0.74
SCAMP4-207ENST00000472442 RBP4P02753 201 aa10.46□□□□□ -0.74
SCAMP4-207ENST00000472442 COX7A1P24310 79 aa10.46□□□□□ -0.74
SCAMP4-207ENST00000472442 Q86TA4 180 aa10.46□□□□□ -0.74
SCAMP4-207ENST00000472442 OR8A1Q8NGG7 326 aa10.46□□□□□ -0.74
SCAMP4-207ENST00000472442 A6NDN8 102 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 ARMS2P0C7Q2 107 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 GP9P14770 177 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 MC5RP33032 325 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 FA2HQ7L5A8 372 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 RAB37Q96AX2 223 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 TIMD4Q96H15 378 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 SLC25A17O43808 307 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 FAM106CPP0CH98 169 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 CSN1S1P47710 185 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 KIR3DS1Q14943 382 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 FAM106AQ4KMX7 169 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 OR10AG1Q8NH19 301 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 PRSS3P2Q8NHM4 247 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 ONECUT1Q9UBC0 465 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 IGSF10Q6WRI0 2623 aa10.45□□□□□ -0.74
SCAMP4-207ENST00000472442 A0A0G2JLM5 398 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 OVOL3O00110 214 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 SUB1P53999 127 aaKnown RBP eCLIP10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 PRNTQ86SH4 94 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 OR4A5Q8NH83 315 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 VSTM2AQ8TAG5 236 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 IGHV3-21A0A0B4J1V1 117 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 IGHV1-3A0A0C4DH29 117 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 TMEM8BA6NDV4 472 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 INS-IGF2F8WCM5 200 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 ENSAO43768 121 aaKnown RBP10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 PRB4P10163 310 aaPredicted RBP10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 TMEM11P17152 192 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 CNTFRP26992 372 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 PIP4P2Q8N4L2 257 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 ASCL2Q99929 193 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 THYN1Q9P016 225 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 A0A1B0GUT8 65 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms