RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 PEMTQ9UBM1 199 aa4.48□□□□□ -1.69
USP39-213ENST00000467885 VWFP04275 2813 aa4.48□□□□□ -1.69
USP39-213ENST00000467885 TRBV19A0A075B6N1 114 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 TRAV8-2A0A0B4J237 113 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 IZUMO1RA6ND01 250 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 CXorf1O96002 111 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 IGLV1-51P01701 117 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 ARL14EPLP0DKL9 152 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 GP9P14770 177 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 ODF1Q14990 250 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 PQLC2Q6ZP29 291 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 TCF24Q7RTU0 167 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 S100A7AQ86SG5 101 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 BPIFA4PQ86YQ2 179 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 CCDC28AQ8IWP9 274 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 STXBP6Q8NFX7 210 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 PAXXQ9BUH6 204 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 SLC25A22Q9H936 323 aa4.47□□□□□ -1.69
USP39-213ENST00000467885 A0A087X0K7 114 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 TRAV25A0A0B4J276 109 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 MAP1LC3B2A6NCE7 125 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 H3BTX0 84 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 SOCS3O14543 225 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 OR10J4P0C629 311 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 RPL7P18124 248 aaKnown RBP4.46□□□□□ -1.7
USP39-213ENST00000467885 S100A7P31151 101 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 TAS2R45P59539 299 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 RANP62826 216 aaKnown RBP4.46□□□□□ -1.7
USP39-213ENST00000467885 SRSF3P84103 164 aaKnown RBP4.46□□□□□ -1.7
USP39-213ENST00000467885 CD300EQ496F6 205 aaPredicted RBP4.46□□□□□ -1.7
USP39-213ENST00000467885 IGFL4Q6B9Z1 124 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 DCANP1Q8TF63 244 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 GPR82Q96P67 336 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 RARRES2Q99969 163 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 MAP1LC3BQ9GZQ8 125 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 RNF24Q9Y225 148 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 ZNF256Q9Y2P7 627 aaPredicted RBP4.46□□□□□ -1.7
USP39-213ENST00000467885 YTHDF2Q9Y5A9 579 aaKnown RBP4.46□□□□□ -1.7
USP39-213ENST00000467885 STAB1Q9NY15 2570 aa4.46□□□□□ -1.7
USP39-213ENST00000467885 A0A1B0GV50 99 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 LINC00862A6NCI5 91 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 PGPA6NDG6 321 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 HELTA6NFD8 242 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 RBFOX3A6NFN3 312 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 FAM74A7A6NL05 159 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 C9JQL5 133 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 K7EQG2 157 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 M0QZ24 198 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 TSPAN4O14817 238 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 OR7C2O60412 319 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 PAGE4O60829 102 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 HBE1P02100 147 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 CD5P06127 495 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 IGLL1P15814 213 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 GALR1P47211 349 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 PSMB3P49720 205 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 INSL3P51460 131 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 RAB14P61106 215 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 GUK1Q16774 197 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 BEAN1Q3B7T3 259 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 KHDC3LQ587J8 217 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 LCN12Q6JVE5 192 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 SIGLEC15Q6ZMC9 328 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 WFDC3Q8IUB2 231 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 TMEM61Q8N0U2 210 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 LYPD1Q8N2G4 141 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 GBGT1Q8N5D6 347 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 BLNKQ8WV28 456 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 GRAMD2BQ96HH9 432 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 NARS2Q96I59 477 aaKnown RBP4.45□□□□□ -1.7
USP39-213ENST00000467885 MS4A6AQ9H2W1 248 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 TMEM231Q9H6L2 316 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 ZNF331Q9NQX6 463 aaPredicted RBP4.45□□□□□ -1.7
USP39-213ENST00000467885 TMEM167BQ9NRX6 74 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 MED9Q9NWA0 146 aa4.45□□□□□ -1.7
USP39-213ENST00000467885 IGKV3-7A0A075B6H7 116 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 TRAV2A0A0B4J234 112 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 A0A1W2PRE2 83 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 ZNF705FA8MVS1 300 aaPredicted RBP4.44□□□□□ -1.7
USP39-213ENST00000467885 TEX46H3BTG2 121 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 SLC17A3O00476 420 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 ZNF253O75346 499 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 SAP30O75446 220 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 HLA-DMBP28068 263 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 CD81P60033 236 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 RPL11P62913 178 aaKnown RBP4.44□□□□□ -1.7
USP39-213ENST00000467885 HAGHQ16775 308 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 C9orf66Q5T8R8 295 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 Q8N1Y9 231 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 EXOC3-AS1Q8N2X6 119 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 FAM24BQ8N5W8 94 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 ARL6IP6Q8N6S5 226 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 OR2K2Q8NGT1 345 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 C20orf173Q96LM9 149 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 FAM210AQ96ND0 272 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 MCRIP2Q9BUT9 160 aaKnown RBP4.44□□□□□ -1.7
USP39-213ENST00000467885 NRN1Q9NPD7 142 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 C19orf73Q9NVV2 129 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 GNG13Q9P2W3 67 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms