RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 HYLS1Q96M11 299 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 C17orf77Q96MU5 243 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 CIB3Q96Q77 187 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-204ENST00000463622 ATP5SQ99766 215 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 TMEM147Q9BVK8 224 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 WDR61Q9GZS3 305 aaKnown RBP2.68□□□□□ -1.98
SCFD1-204ENST00000463622 ARL6Q9H0F7 186 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 ARV1Q9H2C2 271 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 C21orf62Q9NYP8 219 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 DOK5Q9P104 306 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 FRAS1Q86XX4 4008 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 IGHV3OR16-13A0A075B7E8 117 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 IGHV3-49A0A0A0MS15 119 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.68□□□□□ -1.98
SCFD1-204ENST00000463622 IGHV3-74A0A0B4J1X5 117 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 IGHV3-66A0A0C4DH42 116 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 H3BUA1 57 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 AGPAT2O15120 278 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 TGOLN2O43493 480 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 CLN5O75503 358 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 BRI3O95415 125 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 SNRPCP09234 159 aaKnown RBP2.68□□□□□ -1.98
SCFD1-204ENST00000463622 LGALS1P09382 135 aaKnown RBP2.68□□□□□ -1.98
SCFD1-204ENST00000463622 PET100P0DJ07 73 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 PVALBP20472 110 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-204ENST00000463622 FGF7P21781 194 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 S100A11P31949 105 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 CDX1P47902 265 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-204ENST00000463622 FHITP49789 147 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 RAB2AP61019 212 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 AKR1C1Q04828 323 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 ATP5G2Q06055 141 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 BAXQ07812 192 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 ZNF726P1Q15940 193 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 Q56UQ5 140 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 LEMD1Q68G75 181 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 HSD17B13Q7Z5P4 300 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-204ENST00000463622 TMEM144Q7Z5S9 345 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 STX12Q86Y82 276 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 TMEM116Q8NCL8 245 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 KLHL30-AS1Q8NEE0 82 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 BPIFCQ8NFQ6 507 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 OR4X1Q8NH49 305 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 VN1R17PQ8TDU5 208 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 GATAD1Q8WUU5 269 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 TMEM37Q8WXS4 190 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 SLC35E1Q96K37 410 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 TMEM68Q96MH6 324 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 ZNF471Q9BX82 626 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-204ENST00000463622 NPCDR1Q9BY65 106 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 UQCC1Q9NVA1 299 aa2.68□□□□□ -1.98
SCFD1-204ENST00000463622 TRAV5A0A0B4J249 113 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 PIGBOS1A0A0B4J2F0 54 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 FAM223BA6NKX1 122 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 TEX46H3BTG2 121 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 HMGB3O15347 200 aaKnown RBP2.67□□□□□ -1.98
SCFD1-204ENST00000463622 HIST1H1BP16401 226 aaKnown RBP2.67□□□□□ -1.98
SCFD1-204ENST00000463622 FCGR2BP31994 310 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-204ENST00000463622 ARL3P36405 182 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 GPX4P36969 197 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-204ENST00000463622 RAB11AP62491 216 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 ALKAL2Q6UX46 152 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 TOMM20LQ6UXN7 152 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 IL34Q6ZMJ4 242 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 CYP2G1PQ6ZSU1 146 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 FAM223AQ8IWN6 122 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 OR11H1Q8NG94 326 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 OR51G1Q8NGK1 321 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 C4orf3Q8WVX3 66 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 DLX4Q92988 240 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-204ENST00000463622 EEF1AKMT3Q96AZ1 226 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 UBE2E2Q96LR5 201 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 LITAFQ99732 161 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 GINS3Q9BRX5 216 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 SCRT1Q9BWW7 348 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 SLC25A31Q9H0C2 315 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 SLA2Q9H6Q3 261 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 PUS1Q9Y606 427 aaKnown RBP eCLIP2.67□□□□□ -1.98
SCFD1-204ENST00000463622 PXMP4Q9Y6I8 212 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 ABCA13Q86UQ4 5058 aa2.67□□□□□ -1.98
SCFD1-204ENST00000463622 DNAH10Q8IVF4 4471 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 TMEM213A2RRL7 107 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 ZFP92A6NM28 416 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 H3BTX0 84 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 VCYO14598 125 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 GNG7O60262 68 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 HSPB1P04792 205 aaKnown RBP2.66□□□□□ -1.98
SCFD1-204ENST00000463622 CAMLGP49069 296 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 SUB1P53999 127 aaKnown RBP eCLIP2.66□□□□□ -1.981e-7■■■■□ 20.1
SCFD1-204ENST00000463622 MFAP4P55083 255 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 SYNJ2BPP57105 145 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 LYZP61626 148 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 SLC35B1P78383 322 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 MIR17HGQ75NE6 70 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 INO80EQ8NBZ0 244 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-204ENST00000463622 STOML3Q8TAV4 291 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 TRGV9Q99603 122 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 NPVFQ9HCQ7 196 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 RPRMQ9NS64 109 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 PEF1Q9UBV8 284 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms