RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 SIGLECL1Q8N7X8 197 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 RBMXL1Q96E39 390 aaKnown RBP2.15□□□□□ -2.07
VPS8-215ENST00000460158 PRO1933Q9H354 126 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 SAR1AQ9NR31 198 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 FKBP11Q9NYL4 201 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 ZNF222Q9UK12 451 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 TRAPPC1Q9Y5R8 145 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 TMEM14AQ9Y6G1 99 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 RGPD3A6NKT7 1758 aaPredicted RBP2.15□□□□□ -2.07
VPS8-215ENST00000460158 PPLO60437 1756 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 RBBP6Q7Z6E9 1792 aaKnown RBP2.15□□□□□ -2.07
VPS8-215ENST00000460158 MYH4Q9Y623 1939 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 GLI3P10071 1580 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 SCN4AP35499 1836 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 PSME4Q14997 1843 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 CFTRP13569 1480 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 MCM3APO60318 1980 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 TNRC6AQ8NDV7 1962 aaKnown RBP2.14□□□□□ -2.07
VPS8-215ENST00000460158 RIMBP3CA6NJZ7 1639 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 RIMBP3BA6NNM3 1639 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 TRPM1Q7Z4N2 1603 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 RIMBP3Q9UFD9 1639 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 TRBV24-1A0A075B6N3 115 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 SMIM31A0A1B0GVY4 71 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 A8MWP4 228 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 APOC4-APOC2K7ER74 178 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 GEMIN2O14893 280 aaKnown RBP2.14□□□□□ -2.07
VPS8-215ENST00000460158 YPEL1O60688 119 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 SH2D1AO60880 128 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 IGHV1-69P01742 117 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 APOC2P02655 101 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 IGKV1-16P04430 117 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 CGB3P0DN86 165 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 CGB7P0DN87 165 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 IGHV3-30-3P0DP02 117 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 CCL3P10147 92 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 TPT1P13693 172 aaKnown RBP2.14□□□□□ -2.07
VPS8-215ENST00000460158 RPS10P46783 165 aaKnown RBP2.14□□□□□ -2.07
VPS8-215ENST00000460158 ZNF846Q147U1 533 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 Q56UQ5 140 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 KHDC3LQ587J8 217 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 C10orf91Q5T1B1 145 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 C6orf52Q5T4I8 152 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 ZNF322Q6U7Q0 402 aaPredicted RBP2.14□□□□□ -2.07
VPS8-215ENST00000460158 NTM-AS1Q6ZSK4 140 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 CNEP1R1Q8N9A8 125 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 PLPP5Q8NEB5 264 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 CIRBP-AS1Q8TBR5 109 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 LCN9Q8WX39 176 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 VAMP8Q9BV40 100 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 DPY30Q9C005 99 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 C11orf1Q9H5F2 150 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 ZNF443Q9Y2A4 671 aaPredicted RBP2.14□□□□□ -2.07
VPS8-215ENST00000460158 LINC00588Q9Y4M8 146 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 CHCHD2Q9Y6H1 151 aaPredicted RBP2.14□□□□□ -2.07
VPS8-215ENST00000460158 SBF2Q86WG5 1849 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 ARHGAP21Q5T5U3 1957 aa2.14□□□□□ -2.07
VPS8-215ENST00000460158 SUPT6HQ7KZ85 1726 aaKnown RBP2.14□□□□□ -2.07
VPS8-215ENST00000460158 TRBV20-1A0A075B6N2 111 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 A0A0D9SG52 128 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 C3orf85A0A1B0GTC6 90 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 OR51F1A6NGY5 319 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 C17orf51A8MQB3 221 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 C11orf94C9JXX5 98 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 C3orf84H3BNL1 204 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 CREBL2O60519 120 aaPredicted RBP2.13□□□□□ -2.07
VPS8-215ENST00000460158 LY6HO94772 140 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 TCL1BO95988 128 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 NPYP01303 97 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 IGKV1D-33P01593 117 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 IGKV1-33P01594 117 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 CTSDP07339 412 aaPredicted RBP2.13□□□□□ -2.07
VPS8-215ENST00000460158 LINC00032P0C843 101 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 PCBD1P61457 104 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 SYCNQ0VAF6 134 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 KLRD1Q13241 179 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 PYY3Q5JQD4 70 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 DPPA3Q6W0C5 159 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 SOSTDC1Q6X4U4 206 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 ZFP2Q6ZN57 461 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 FOXI2Q6ZQN5 318 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 Q6ZUT4 128 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 LINC00471Q8N535 108 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 C15orf56Q8N910 161 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 LINC01560Q8TB33 94 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 AQP10Q96PS8 301 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 SEC11CQ9BY50 192 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 AGPAT4-IT1Q9H0P7 198 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 SLC35B3Q9H1N7 401 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 RGS12O14924 1447 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 CRB1P82279 1406 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 SPHKAPQ2M3C7 1700 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 ANK1P16157 1881 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 TRPM7Q96QT4 1865 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 COL1A1P02452 1464 aaPredicted RBP2.13□□□□□ -2.07
VPS8-215ENST00000460158 CCDC141Q6ZP82 1450 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 FYCO1Q9BQS8 1478 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 CC2D2AQ9P2K1 1620 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 LCTP09848 1927 aa2.13□□□□□ -2.07
VPS8-215ENST00000460158 ARHGAP5Q13017 1502 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms