RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 PPIAL4FP0DN26 164 aa10.85□□□□□ -0.67
PTPRE-204ENST00000455661 CLEC2AQ6UVW9 174 aa10.85□□□□□ -0.67
PTPRE-204ENST00000455661 SEM1Q6ZVN7 128 aa10.85□□□□□ -0.67
PTPRE-204ENST00000455661 TMSB15BA0A087X1C1 80 aa10.84□□□□□ -0.67
PTPRE-204ENST00000455661 SCGB1A1P11684 91 aa10.84□□□□□ -0.67
PTPRE-204ENST00000455661 BCL6BQ8N143 479 aaPredicted RBP10.84□□□□□ -0.67
PTPRE-204ENST00000455661 PIFOQ8TCI5 191 aa10.84□□□□□ -0.67
PTPRE-204ENST00000455661 C8orf49Q96NF6 230 aa10.84□□□□□ -0.67
PTPRE-204ENST00000455661 SPOCK3Q9BQ16 436 aa10.84□□□□□ -0.67
PTPRE-204ENST00000455661 HIGD1BQ9P298 99 aa10.84□□□□□ -0.67
PTPRE-204ENST00000455661 SIGLEC9Q9Y336 463 aa10.84□□□□□ -0.67
PTPRE-204ENST00000455661 FBLL1A6NHQ2 334 aaKnown RBP10.84□□□□□ -0.67
PTPRE-204ENST00000455661 H3BRN7 92 aa10.84□□□□□ -0.67
PTPRE-204ENST00000455661 PAX8Q06710 450 aa10.84□□□□□ -0.67
PTPRE-204ENST00000455661 TM4SF20Q53R12 229 aa10.84□□□□□ -0.67
PTPRE-204ENST00000455661 DKK2Q9UBU2 259 aa10.84□□□□□ -0.67
PTPRE-204ENST00000455661 NKX2-8O15522 239 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 GNG7O60262 68 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 CRYGBP07316 175 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 CD59P13987 128 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 PLGLAQ15195 96 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 AAMDCQ9H7C9 122 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 PPIAL4CA0A0B4J2A2 164 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 TEX48A0A1B0GUV7 120 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 C19orf67A6NJJ6 358 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 I3L2K1 104 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 PPIAL4GP0DN37 164 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 CD40P25942 277 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 CNTFRP26992 372 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 ASCL5Q7RTU5 278 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 PPP1R27Q86WC6 154 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 SIGMAR1Q99720 223 aa10.83□□□□□ -0.68
PTPRE-204ENST00000455661 SHISA9B4DS77 424 aa10.82□□□□□ -0.68
PTPRE-204ENST00000455661 TEX22C9J3V5 150 aa10.82□□□□□ -0.68
PTPRE-204ENST00000455661 FCN3O75636 299 aa10.82□□□□□ -0.68
PTPRE-204ENST00000455661 NPYP01303 97 aa10.82□□□□□ -0.68
PTPRE-204ENST00000455661 TWIST1Q15672 202 aa10.82□□□□□ -0.68
PTPRE-204ENST00000455661 C1orf185Q5T7R7 199 aa10.82□□□□□ -0.68
PTPRE-204ENST00000455661 IGFL2Q6UWQ7 119 aa10.82□□□□□ -0.68
PTPRE-204ENST00000455661 S100A7AQ86SG5 101 aa10.82□□□□□ -0.68
PTPRE-204ENST00000455661 VGLL1Q99990 258 aa10.82□□□□□ -0.68
PTPRE-204ENST00000455661 DMDP11532 3685 aa10.82□□□□□ -0.68
PTPRE-204ENST00000455661 PLXNB1O43157 2135 aa10.82□□□□□ -0.68
PTPRE-204ENST00000455661 C17orf100A8MU93 164 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 J3QR89 54 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 SH2D1AO60880 128 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 IGKV1-17P01599 117 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 PRB4P10163 310 aaPredicted RBP10.81□□□□□ -0.68
PTPRE-204ENST00000455661 FCGR2BP31994 310 aaPredicted RBP10.81□□□□□ -0.68
PTPRE-204ENST00000455661 WFDC3Q8IUB2 231 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 NUP37Q8NFH4 326 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 MAP1LC3AQ9H492 121 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 ICE1Q9Y2F5 2266 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 SMKR1H3BMG3 65 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 M0R3E3 92 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 THBDP07204 575 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 FTH1P19P0C7X4 201 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 IGHV1-8P0DP01 117 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 FXYD2P54710 66 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 LYPD2Q6UXB3 125 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 C18orf15Q96N68 181 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 CHAC1Q9BUX1 264 aa10.81□□□□□ -0.68
PTPRE-204ENST00000455661 TMEM178BH3BS89 294 aa10.8□□□□□ -0.68
PTPRE-204ENST00000455661 AZU1P20160 251 aa10.8□□□□□ -0.68
PTPRE-204ENST00000455661 TNFRSF14Q92956 283 aa10.8□□□□□ -0.68
PTPRE-204ENST00000455661 WI2-2373I1.2A0A1W2PRP0 233 aa10.8□□□□□ -0.68
PTPRE-204ENST00000455661 PRSS1P07477 247 aa10.8□□□□□ -0.68
PTPRE-204ENST00000455661 WT1P19544 449 aaPredicted RBP10.8□□□□□ -0.68
PTPRE-204ENST00000455661 DLX6P56179 175 aa10.8□□□□□ -0.68
PTPRE-204ENST00000455661 PDE6HQ13956 83 aa10.8□□□□□ -0.68
PTPRE-204ENST00000455661 CCL17Q92583 94 aa10.8□□□□□ -0.68
PTPRE-204ENST00000455661 RNF125Q96EQ8 232 aa10.8□□□□□ -0.68
PTPRE-204ENST00000455661 CEACAM4O75871 244 aa10.79□□□□□ -0.68
PTPRE-204ENST00000455661 IL4P05112 153 aa10.79□□□□□ -0.68
PTPRE-204ENST00000455661 LOXP28300 417 aaPredicted RBP10.79□□□□□ -0.68
PTPRE-204ENST00000455661 LINC01559Q495D7 138 aa10.79□□□□□ -0.68
PTPRE-204ENST00000455661 TMEM155Q4W5P6 130 aa10.79□□□□□ -0.68
PTPRE-204ENST00000455661 ZNF491Q8N8L2 437 aa10.79□□□□□ -0.68
PTPRE-204ENST00000455661 GTSF1LQ9H1H1 148 aa10.79□□□□□ -0.68
PTPRE-204ENST00000455661 F8W1H4 67 aa10.79□□□□□ -0.68
PTPRE-204ENST00000455661 IGKCP01834 107 aa10.79□□□□□ -0.68
PTPRE-204ENST00000455661 FCER1GP30273 86 aa10.79□□□□□ -0.68
PTPRE-204ENST00000455661 LEPP41159 167 aa10.79□□□□□ -0.68
PTPRE-204ENST00000455661 CD300EQ496F6 205 aaPredicted RBP10.79□□□□□ -0.68
PTPRE-204ENST00000455661 TMEM108Q6UXF1 575 aa10.79□□□□□ -0.68
PTPRE-204ENST00000455661 FBXL15Q9H469 300 aa10.79□□□□□ -0.68
PTPRE-204ENST00000455661 ZMAT4Q9H898 229 aa10.79□□□□□ -0.68
PTPRE-204ENST00000455661 IGKV2D-26A0A0A0MRZ7 120 aa10.78□□□□□ -0.68
PTPRE-204ENST00000455661 NDUFS8O00217 210 aa10.78□□□□□ -0.68
PTPRE-204ENST00000455661 MRPS12O15235 138 aaKnown RBP10.78□□□□□ -0.68
PTPRE-204ENST00000455661 ZNF207O43670 478 aaKnown RBP10.78□□□□□ -0.68
PTPRE-204ENST00000455661 BMI1P35226 326 aa10.78□□□□□ -0.68
PTPRE-204ENST00000455661 FAM27E3Q08E93 113 aa10.78□□□□□ -0.68
PTPRE-204ENST00000455661 ODF1Q14990 250 aa10.78□□□□□ -0.68
PTPRE-204ENST00000455661 NXT2Q9NPJ8 142 aaKnown RBP10.78□□□□□ -0.68
PTPRE-204ENST00000455661 NHP2Q9NX24 153 aaKnown RBP10.78□□□□□ -0.68
PTPRE-204ENST00000455661 SMPXQ9UHP9 88 aa10.78□□□□□ -0.68
PTPRE-204ENST00000455661 K7ERJ3 54 aa10.78□□□□□ -0.68
PTPRE-204ENST00000455661 CEND1Q8N111 149 aa10.78□□□□□ -0.68
PTPRE-204ENST00000455661 SRSF8Q9BRL6 282 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms