RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 EVI2AP22794 236 aa14.81□□□□□ -0.04
PTPA-223ENST00000452489 TMSB15BA0A087X1C1 80 aa14.81□□□□□ -0.04
PTPA-223ENST00000452489 PSMB2P49721 201 aa14.81□□□□□ -0.04
PTPA-223ENST00000452489 MEOX1P50221 254 aa14.81□□□□□ -0.04
PTPA-223ENST00000452489 POU2AF1Q16633 256 aa14.81□□□□□ -0.04
PTPA-223ENST00000452489 TBC1D28Q2M2D7 210 aa14.81□□□□□ -0.04
PTPA-223ENST00000452489 ZNF296Q8WUU4 475 aaPredicted RBP14.81□□□□□ -0.04
PTPA-223ENST00000452489 FOXC2Q99958 501 aa14.81□□□□□ -0.04
PTPA-223ENST00000452489 TMEM8BA6NDV4 472 aa14.8□□□□□ -0.04
PTPA-223ENST00000452489 SAA1P0DJI8 122 aaPredicted RBP14.8□□□□□ -0.04
PTPA-223ENST00000452489 PRDX2P32119 198 aa14.8□□□□□ -0.04
PTPA-223ENST00000452489 PPDPFLQ8WWR9 84 aa14.8□□□□□ -0.04
PTPA-223ENST00000452489 DLX4Q92988 240 aaPredicted RBP14.8□□□□□ -0.04
PTPA-223ENST00000452489 HARBI1Q96MB7 349 aa14.8□□□□□ -0.04
PTPA-223ENST00000452489 TMEM160Q9NX00 188 aa14.8□□□□□ -0.04
PTPA-223ENST00000452489 IQCF6A8MYZ5 107 aa14.8□□□□□ -0.04
PTPA-223ENST00000452489 CRIP1P50238 77 aa14.8□□□□□ -0.04
PTPA-223ENST00000452489 NXPH1P58417 271 aa14.8□□□□□ -0.04
PTPA-223ENST00000452489 LYZL1Q6UWQ5 148 aa14.8□□□□□ -0.04
PTPA-223ENST00000452489 AJUBAQ96IF1 538 aa14.8□□□□□ -0.04
PTPA-223ENST00000452489 CITED1Q99966 193 aa14.8□□□□□ -0.04
PTPA-223ENST00000452489 GAGE12JA6NER3 117 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 GAGE7O76087 117 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 GAGE12FP0CL80 117 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 GAGE12GP0CL81 117 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 GAGE12IP0CL82 117 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 GAGE4Q13068 117 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 TAL2Q16559 108 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 Q6ZS92 163 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.79□□□□□ -0.04
PTPA-223ENST00000452489 C8orf46Q8TAG6 207 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 ZNRD1Q9P1U0 126 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 ARFGEF3Q5TH69 2177 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 NAV3Q8IVL0 2385 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 SHISA9B4DS77 424 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 CKS2P33552 79 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 LEPP41159 167 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 ZFP2Q6ZN57 461 aa14.79□□□□□ -0.04
PTPA-223ENST00000452489 TRBV7-3A0A075B6L6 115 aa14.78□□□□□ -0.04
PTPA-223ENST00000452489 TRAV40A0A0B4J280 105 aa14.78□□□□□ -0.04
PTPA-223ENST00000452489 FABP5P3A8MUU1 101 aa14.78□□□□□ -0.04
PTPA-223ENST00000452489 ATP5IP56385 69 aaPredicted RBP14.78□□□□□ -0.04
PTPA-223ENST00000452489 ZNRF1Q8ND25 227 aa14.78□□□□□ -0.04
PTPA-223ENST00000452489 TMEM158Q8WZ71 300 aa14.78□□□□□ -0.04
PTPA-223ENST00000452489 CALYQ9NYX4 217 aa14.78□□□□□ -0.04
PTPA-223ENST00000452489 PCNX2A6NKB5 2137 aa14.78□□□□□ -0.04
PTPA-223ENST00000452489 DPM2O94777 84 aa14.77□□□□□ -0.04
PTPA-223ENST00000452489 PRTN3P24158 256 aa14.77□□□□□ -0.04
PTPA-223ENST00000452489 ID1P41134 155 aa14.77□□□□□ -0.04
PTPA-223ENST00000452489 MRPS17Q9Y2R5 130 aaKnown RBP14.77□□□□□ -0.04
PTPA-223ENST00000452489 NDUFV3P56181 108 aaKnown RBP14.77□□□□□ -0.05
PTPA-223ENST00000452489 C10orf55Q5SWW7 151 aa14.77□□□□□ -0.05
PTPA-223ENST00000452489 TEN1Q86WV5 123 aa14.77□□□□□ -0.05
PTPA-223ENST00000452489 LOC107984156A0A0G2JMH3 177 aa14.76□□□□□ -0.05
PTPA-223ENST00000452489 ERHP84090 104 aaKnown RBP14.76□□□□□ -0.05
PTPA-223ENST00000452489 WT1-ASQ06250 92 aa14.76□□□□□ -0.05
PTPA-223ENST00000452489 ARL17AQ8IVW1 177 aa14.76□□□□□ -0.05
PTPA-223ENST00000452489 KLF14Q8TD94 323 aaPredicted RBP14.76□□□□□ -0.05
PTPA-223ENST00000452489 NDUFA4L2Q9NRX3 87 aa14.76□□□□□ -0.05
PTPA-223ENST00000452489 IGKV1D-17A0A075B6S4 117 aa14.76□□□□□ -0.05
PTPA-223ENST00000452489 IGHV3OR15-7A0A075B7D8 119 aa14.76□□□□□ -0.05
PTPA-223ENST00000452489 HOXA3O43365 443 aaPredicted RBP14.76□□□□□ -0.05
PTPA-223ENST00000452489 GAS8-AS1O95177 125 aa14.76□□□□□ -0.05
PTPA-223ENST00000452489 IL4P05112 153 aa14.76□□□□□ -0.05
PTPA-223ENST00000452489 ZNF688P0C7X2 276 aa14.76□□□□□ -0.05
PTPA-223ENST00000452489 PSMG4Q5JS54 123 aa14.75□□□□□ -0.05
PTPA-223ENST00000452489 THAP8Q8NA92 274 aa14.75□□□□□ -0.05
PTPA-223ENST00000452489 A0A087WX48 190 aa14.75□□□□□ -0.05
PTPA-223ENST00000452489 IGHV5-10-1A0A0J9YXX1 117 aa14.75□□□□□ -0.05
PTPA-223ENST00000452489 A0A1W2PQM1 296 aa14.75□□□□□ -0.05
PTPA-223ENST00000452489 RHODO00212 210 aa14.75□□□□□ -0.05
PTPA-223ENST00000452489 MAGEA5P43359 124 aa14.75□□□□□ -0.05
PTPA-223ENST00000452489 SRD5A1P18405 259 aa14.74□□□□□ -0.05
PTPA-223ENST00000452489 ARL3P36405 182 aa14.74□□□□□ -0.05
PTPA-223ENST00000452489 CXXC4Q9H2H0 198 aa14.74□□□□□ -0.05
PTPA-223ENST00000452489 MRPL35Q9NZE8 188 aaKnown RBP14.74□□□□□ -0.05
PTPA-223ENST00000452489 RAX2Q96IS3 184 aa14.74□□□□□ -0.05
PTPA-223ENST00000452489 TMEM133Q9H2Q1 129 aa14.74□□□□□ -0.05
PTPA-223ENST00000452489 OTORQ9NRC9 128 aa14.74□□□□□ -0.05
PTPA-223ENST00000452489 PI4KAP42356 2102 aa14.74□□□□□ -0.05
PTPA-223ENST00000452489 LINC01549A6NIU2 74 aa14.73□□□□□ -0.05
PTPA-223ENST00000452489 HLA-DRB4P13762 266 aa14.73□□□□□ -0.05
PTPA-223ENST00000452489 C17orf58Q2M2W7 97 aa14.73□□□□□ -0.05
PTPA-223ENST00000452489 ZCCHC24Q8N2G6 241 aaKnown RBP14.73□□□□□ -0.05
PTPA-223ENST00000452489 HLA-DRB4X5D2U9 266 aa14.73□□□□□ -0.05
PTPA-223ENST00000452489 HOXB4P17483 251 aaPredicted RBP14.73□□□□□ -0.05
PTPA-223ENST00000452489 TNFRSF1AP19438 455 aa14.73□□□□□ -0.05
PTPA-223ENST00000452489 TWIST1Q15672 202 aa14.73□□□□□ -0.05
PTPA-223ENST00000452489 GUSBP11Q6P575 273 aa14.73□□□□□ -0.05
PTPA-223ENST00000452489 IGHV3-21A0A0B4J1V1 117 aa14.72□□□□□ -0.05
PTPA-223ENST00000452489 C8orf49Q96NF6 230 aa14.72□□□□□ -0.05
PTPA-223ENST00000452489 TRAV4A0A0B4J268 109 aa14.72□□□□□ -0.05
PTPA-223ENST00000452489 CGB1A6NKQ9 187 aa14.72□□□□□ -0.05
PTPA-223ENST00000452489 ZNF784Q8NCA9 323 aaPredicted RBP14.72□□□□□ -0.05
PTPA-223ENST00000452489 SSUH2Q9Y2M2 353 aa14.72□□□□□ -0.05
PTPA-223ENST00000452489 CRLF1O75462 422 aa14.71□□□□□ -0.05
PTPA-223ENST00000452489 TGFAP01135 160 aa14.71□□□□□ -0.05
PTPA-223ENST00000452489 GAGE2BQ13066 116 aa14.71□□□□□ -0.05
PTPA-223ENST00000452489 GAGE2EQ4V326 116 aa14.71□□□□□ -0.05
PTPA-223ENST00000452489 PEAR1Q5VY43 1037 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms