RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 M0QZ24 198 aa14.57□□□□□ -0.08
RPS28-202ENST00000449223 PAGE4O60829 102 aa14.57□□□□□ -0.08
RPS28-202ENST00000449223 NDUFB4O95168 129 aa14.57□□□□□ -0.08
RPS28-202ENST00000449223 PF4P02776 101 aa14.57□□□□□ -0.08
RPS28-202ENST00000449223 ATF4P18848 351 aaPredicted RBP14.57□□□□□ -0.08
RPS28-202ENST00000449223 MEF2BQ02080 365 aaPredicted RBP14.57□□□□□ -0.08
RPS28-202ENST00000449223 TOR2AQ5JU69 321 aa14.57□□□□□ -0.08
RPS28-202ENST00000449223 UQCC3Q6UW78 93 aa14.57□□□□□ -0.08
RPS28-202ENST00000449223 C12orf54Q6X4T0 127 aa14.57□□□□□ -0.08
RPS28-202ENST00000449223 MLXQ9UH92 298 aa14.57□□□□□ -0.08
RPS28-202ENST00000449223 YTHDF2Q9Y5A9 579 aaKnown RBP14.57□□□□□ -0.08
RPS28-202ENST00000449223 ICAM4Q14773 271 aa14.56□□□□□ -0.08
RPS28-202ENST00000449223 HAGHQ16775 308 aa14.56□□□□□ -0.08
RPS28-202ENST00000449223 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.56□□□□□ -0.08
RPS28-202ENST00000449223 CCDC28AQ8IWP9 274 aa14.56□□□□□ -0.08
RPS28-202ENST00000449223 C3orf56Q8N813 242 aa14.56□□□□□ -0.08
RPS28-202ENST00000449223 RARRES2Q99969 163 aa14.56□□□□□ -0.08
RPS28-202ENST00000449223 EIF5A2Q9GZV4 153 aaKnown RBP14.56□□□□□ -0.08
RPS28-202ENST00000449223 GGTLC3B5MD39 225 aa14.55□□□□□ -0.08
RPS28-202ENST00000449223 CD81P60033 236 aa14.55□□□□□ -0.08
RPS28-202ENST00000449223 UBE2G2P60604 165 aa14.55□□□□□ -0.08
RPS28-202ENST00000449223 TCF24Q7RTU0 167 aa14.55□□□□□ -0.08
RPS28-202ENST00000449223 BLNKQ8WV28 456 aa14.55□□□□□ -0.08
RPS28-202ENST00000449223 TCEAL7Q9BRU2 100 aa14.55□□□□□ -0.08
RPS28-202ENST00000449223 NRN1Q9NPD7 142 aa14.55□□□□□ -0.08
RPS28-202ENST00000449223 ZNF331Q9NQX6 463 aaPredicted RBP14.55□□□□□ -0.08
RPS28-202ENST00000449223 ZNF785A8K8V0 405 aa14.54□□□□□ -0.08
RPS28-202ENST00000449223 C11orf94C9JXX5 98 aa14.54□□□□□ -0.08
RPS28-202ENST00000449223 SLC17A3O00476 420 aa14.54□□□□□ -0.08
RPS28-202ENST00000449223 SOCS3O14543 225 aa14.54□□□□□ -0.08
RPS28-202ENST00000449223 SRSF3P84103 164 aaKnown RBP14.54□□□□□ -0.08
RPS28-202ENST00000449223 PSG9Q00887 426 aa14.54□□□□□ -0.08
RPS28-202ENST00000449223 PEA15Q15121 130 aa14.54□□□□□ -0.08
RPS28-202ENST00000449223 SAMD13Q5VXD3 122 aa14.54□□□□□ -0.08
RPS28-202ENST00000449223 SLC50A1Q9BRV3 221 aa14.54□□□□□ -0.08
RPS28-202ENST00000449223 SNRPCP09234 159 aaKnown RBP14.53□□□□□ -0.08
RPS28-202ENST00000449223 ATP5G3P48201 142 aa14.53□□□□□ -0.08
RPS28-202ENST00000449223 RANP62826 216 aaKnown RBP14.53□□□□□ -0.08
RPS28-202ENST00000449223 DEFB114Q30KQ6 69 aa14.53□□□□□ -0.08
RPS28-202ENST00000449223 ARL6IP6Q8N6S5 226 aa14.53□□□□□ -0.08
RPS28-202ENST00000449223 Q9H3A6 140 aa14.53□□□□□ -0.08
RPS28-202ENST00000449223 OTORQ9NRC9 128 aa14.53□□□□□ -0.08
RPS28-202ENST00000449223 CLEC5AQ9NY25 188 aa14.53□□□□□ -0.08
RPS28-202ENST00000449223 PDE6DO43924 150 aa14.52□□□□□ -0.08
RPS28-202ENST00000449223 CST9LP1Q5W188 147 aa14.52□□□□□ -0.08
RPS28-202ENST00000449223 SLC7A5P1Q8MH63 180 aa14.52□□□□□ -0.08
RPS28-202ENST00000449223 DCANP1Q8TF63 244 aa14.52□□□□□ -0.08
RPS28-202ENST00000449223 TRAV2A0A0B4J234 112 aa14.51□□□□□ -0.09
RPS28-202ENST00000449223 TRAV25A0A0B4J276 109 aa14.51□□□□□ -0.09
RPS28-202ENST00000449223 TMEM250H0YL14 139 aa14.51□□□□□ -0.09
RPS28-202ENST00000449223 H3BTX0 84 aa14.51□□□□□ -0.09
RPS28-202ENST00000449223 SUMO1P63165 101 aaKnown RBP14.51□□□□□ -0.09
RPS28-202ENST00000449223 RXFP4Q8TDU9 374 aa14.51□□□□□ -0.09
RPS28-202ENST00000449223 DYNLRB2Q8TF09 96 aa14.51□□□□□ -0.09
RPS28-202ENST00000449223 C9JQL5 133 aa14.51□□□□□ -0.09
RPS28-202ENST00000449223 TSPAN4O14817 238 aa14.51□□□□□ -0.09
RPS28-202ENST00000449223 C5orf17Q8NAS9 161 aa14.51□□□□□ -0.09
RPS28-202ENST00000449223 WFDC9Q8NEX5 89 aa14.51□□□□□ -0.09
RPS28-202ENST00000449223 C11orf52Q96A22 123 aa14.51□□□□□ -0.09
RPS28-202ENST00000449223 AAMDCQ9H7C9 122 aa14.51□□□□□ -0.09
RPS28-202ENST00000449223 F6UZH7 168 aa14.5□□□□□ -0.09
RPS28-202ENST00000449223 ISLRO14498 428 aa14.5□□□□□ -0.09
RPS28-202ENST00000449223 OR2K2Q8NGT1 345 aa14.5□□□□□ -0.09
RPS28-202ENST00000449223 MRPL53Q96EL3 112 aaKnown RBP14.5□□□□□ -0.09
RPS28-202ENST00000449223 MS4A6AQ9H2W1 248 aa14.5□□□□□ -0.09
RPS28-202ENST00000449223 TRAV8-2A0A0B4J237 113 aa14.49□□□□□ -0.09
RPS28-202ENST00000449223 PGPA6NDG6 321 aa14.49□□□□□ -0.09
RPS28-202ENST00000449223 IGLV1-51P01701 117 aa14.49□□□□□ -0.09
RPS28-202ENST00000449223 SRP19P09132 144 aaKnown RBP14.49□□□□□ -0.09
RPS28-202ENST00000449223 INSL3P51460 131 aa14.49□□□□□ -0.09
RPS28-202ENST00000449223 RPL11P62913 178 aaKnown RBP14.49□□□□□ -0.09
RPS28-202ENST00000449223 TMEM61Q8N0U2 210 aa14.49□□□□□ -0.09
RPS28-202ENST00000449223 EXOC3-AS1Q8N2X6 119 aa14.49□□□□□ -0.09
RPS28-202ENST00000449223 SLC35B3Q9H1N7 401 aa14.49□□□□□ -0.09
RPS28-202ENST00000449223 TRRAPQ9Y4A5 3859 aa14.48□□□□□ -0.09
RPS28-202ENST00000449223 RIPPLY3P57055 190 aa14.48□□□□□ -0.09
RPS28-202ENST00000449223 CD300EQ496F6 205 aaPredicted RBP14.48□□□□□ -0.09
RPS28-202ENST00000449223 HIST1H2BAQ96A08 127 aa14.48□□□□□ -0.09
RPS28-202ENST00000449223 PRELID1Q9Y255 219 aa14.48□□□□□ -0.09
RPS28-202ENST00000449223 K7EQG2 157 aa14.47□□□□□ -0.09
RPS28-202ENST00000449223 SAP30O75446 220 aa14.47□□□□□ -0.09
RPS28-202ENST00000449223 PAFAH1B2P68402 229 aa14.47□□□□□ -0.09
RPS28-202ENST00000449223 SPAG8Q99932 426 aaPredicted RBP14.47□□□□□ -0.09
RPS28-202ENST00000449223 TREM1Q9NP99 234 aa14.47□□□□□ -0.09
RPS28-202ENST00000449223 EPDR1Q9UM22 224 aa14.47□□□□□ -0.09
RPS28-202ENST00000449223 RBPMS2Q6ZRY4 209 aaKnown RBP14.46□□□□□ -0.09
RPS28-202ENST00000449223 C2CD4CQ8TF44 421 aa14.46□□□□□ -0.09
RPS28-202ENST00000449223 C16orf92Q96LL3 132 aa14.46□□□□□ -0.09
RPS28-202ENST00000449223 MCRIP2Q9BUT9 160 aaKnown RBP14.46□□□□□ -0.09
RPS28-202ENST00000449223 ANK2Q01484 3957 aa14.46□□□□□ -0.09
RPS28-202ENST00000449223 TMEM218A2RU14 115 aa14.46□□□□□ -0.1
RPS28-202ENST00000449223 SLC25A5P05141 298 aaKnown RBP14.46□□□□□ -0.1
RPS28-202ENST00000449223 CYB561D1Q8N8Q1 229 aa14.46□□□□□ -0.1
RPS28-202ENST00000449223 RPUSD4Q96CM3 377 aaKnown RBP14.46□□□□□ -0.1
RPS28-202ENST00000449223 CITED4Q96RK1 184 aa14.46□□□□□ -0.1
RPS28-202ENST00000449223 MDFIQ99750 246 aa14.46□□□□□ -0.1
RPS28-202ENST00000449223 ATG101Q9BSB4 218 aa14.46□□□□□ -0.1
RPS28-202ENST00000449223 SERTM2A0A1B0GWG4 89 aa14.45□□□□□ -0.1
RPS28-202ENST00000449223 SCO2A0A1W2PP80 73 aa14.45□□□□□ -0.1
RPS28-202ENST00000449223 M0R3E3 92 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms