RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 PARD6GQ9BYG4 376 aaPredicted RBP-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 CCDC90BQ9GZT6 254 aa-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 DRC3Q9H069 523 aa-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 TCEAL2Q9H3H9 227 aaPredicted RBP-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 UQCC1Q9NVA1 299 aa-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 FGFR1OP2Q9NVK5 253 aa-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 LSM5Q9Y4Y9 91 aaKnown RBP-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 ARL5AQ9Y689 179 aa-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 KIAA1109Q2LD37 5005 aa-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 CREBBPQ92793 2442 aa-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 CADP27708 2225 aa-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 COL6A3P12111 3177 aa-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 DCHS2Q6V1P9 2916 aa-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 MYLKQ15746 1914 aa-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 FLNAP21333 2647 aaKnown RBP-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 STAB2Q8WWQ8 2551 aa-0.52□□□□□ -2.49
SNHG3-203ENST00000447507 EP300Q09472 2414 aaPredicted RBP-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 CEP164Q9UPV0 1460 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 TENM2Q9NT68 2774 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 PKHD1P08F94 4074 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 FLGP20930 4061 aaPredicted RBP-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 DSPPQ9NZW4 1301 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 A0A0J9YY99 117 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 hADV38S2A0JD32 116 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 C17orf112F2Z3M2 114 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 SULT1C4O75897 302 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 OR7C1O76099 320 aaPredicted RBP-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 CFDP00746 253 aaPredicted RBP-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 EVI2AP22794 236 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 RPS3P23396 243 aaKnown RBP eCLIP-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 PSME3P61289 254 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 COX6A2Q02221 97 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 NEDD8Q15843 81 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 Q6Q795 121 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 OR5D16Q8NGK9 328 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 OR4K15Q8NH41 348 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 HYLS1Q96M11 299 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 NPCDR1Q9BY65 106 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 NAT8BQ9UHF3 227 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 ASB4Q9Y574 426 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 NUP98P52948 1817 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 PDZD2O15018 2839 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 FRMPD1Q5SYB0 1578 aa-0.53□□□□□ -2.49
SNHG3-203ENST00000447507 SOGA1O94964 1423 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 PKD1L1Q8TDX9 2849 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 SETD2Q9BYW2 2564 aaPredicted RBP-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 TRAV27A0A087WT01 109 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 A0A096LNT2 108 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 A0A096LPI6 279 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 TRGV10A0A0A0MS01 117 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 A0A0G2JMM0 328 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 A0A1W2PPB8 328 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 hDV103S1A0JD37 113 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 ERICH2A1L162 156 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 KIR3DP1A8MWS1 328 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 HSBP1L1C9JCN9 74 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 LRRN3E7EW58 273 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 KPNA3O00505 521 aaPredicted RBP-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 TAX1BP3O14907 124 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 CST8O60676 142 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 DEXIO95424 95 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 HAND1O96004 215 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 IGHV3-33P01772 117 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 APOEP02649 317 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 TTRP02766 147 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 CXCL1P09341 107 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 HIST1H1EP10412 219 aaKnown RBP-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 SULT1A1P50225 295 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 RAB5CP51148 216 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 DYNLT3P51808 116 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 PIGPP57054 158 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 RANP62826 216 aaKnown RBP-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 IMPG1Q17R60 797 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 RRN3P1Q2M238 152 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 LINC00299Q6ZSB3 139 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 OR6V1Q8N148 313 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 LRRC18Q8N456 261 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 CT55Q8WUE5 264 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 PTH2Q96A98 100 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 C2orf50Q96LR7 162 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 OR52E6Q96RD3 313 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 POPDC3Q9HBV1 291 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 UNC13BO14795 1591 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 SNAPC4Q5SXM2 1469 aa-0.54□□□□□ -2.5
SNHG3-203ENST00000447507 C9orf84Q5VXU9 1444 aa-0.55□□□□□ -2.5
SNHG3-203ENST00000447507 N4BP2Q86UW6 1770 aaPredicted RBP-0.55□□□□□ -2.5
SNHG3-203ENST00000447507 TNS1Q9HBL0 1735 aaKnown RBP-0.55□□□□□ -2.5
SNHG3-203ENST00000447507 PTPRQQ9UMZ3 2332 aa-0.55□□□□□ -2.5
SNHG3-203ENST00000447507 ABCA1O95477 2261 aa-0.55□□□□□ -2.5
SNHG3-203ENST00000447507 A0A087WUJ7 227 aa-0.55□□□□□ -2.5
SNHG3-203ENST00000447507 TRAV4A0A0B4J268 109 aa-0.55□□□□□ -2.5
SNHG3-203ENST00000447507 CLDN24A6NM45 220 aa-0.55□□□□□ -2.5
SNHG3-203ENST00000447507 A6NN06 94 aa-0.55□□□□□ -2.5
SNHG3-203ENST00000447507 SLC16A4O15374 487 aa-0.55□□□□□ -2.5
SNHG3-203ENST00000447507 IGHV3-30P01768 117 aa-0.55□□□□□ -2.5
SNHG3-203ENST00000447507 CALB1P05937 261 aa-0.55□□□□□ -2.5
SNHG3-203ENST00000447507 CRHP06850 196 aa-0.55□□□□□ -2.5
SNHG3-203ENST00000447507 C8GP07360 202 aa-0.55□□□□□ -2.5
SNHG3-203ENST00000447507 NMBP08949 121 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms