RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	SHISA9	B4DS77	424 aa		5.42	□□□□□ -1.54
TRIM6-205	ENST00000445329	TMEM150C	B9EJG8	249 aa		5.42	□□□□□ -1.54
TRIM6-205	ENST00000445329	CXCL13	O43927	109 aa		5.42	□□□□□ -1.54
TRIM6-205	ENST00000445329	AVP	P01185	164 aa		5.42	□□□□□ -1.54
TRIM6-205	ENST00000445329	ELANE	P08246	267 aa		5.42	□□□□□ -1.54
TRIM6-205	ENST00000445329	FAM90A13P	P0C7W8	464 aa		5.42	□□□□□ -1.54
TRIM6-205	ENST00000445329	FAM90A24P	P0C7X0	464 aa		5.42	□□□□□ -1.54
TRIM6-205	ENST00000445329	PLGLB1	Q02325	96 aa		5.42	□□□□□ -1.54
TRIM6-205	ENST00000445329	MRPL14	Q6P1L8	145 aa	Known RBP	5.42	□□□□□ -1.54
TRIM6-205	ENST00000445329	CCL4L1	Q8NHW4	92 aa		5.42	□□□□□ -1.54
TRIM6-205	ENST00000445329	PLEKHB2	Q96CS7	222 aa		5.42	□□□□□ -1.54
TRIM6-205	ENST00000445329	NABP2	Q9BQ15	211 aa		5.42	□□□□□ -1.54
TRIM6-205	ENST00000445329	PHPT1	Q9NRX4	125 aa	Predicted RBP	5.42	□□□□□ -1.54
TRIM6-205	ENST00000445329	ADAMTS9	Q9P2N4	1935 aa		5.42	□□□□□ -1.54
TRIM6-205	ENST00000445329	TRAV41	A0A0B4J266	112 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	MYMX	A0A1B0GTQ4	84 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	APRG1	Q8IVJ8	170 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	TMEM52	Q8NDY8	209 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	FSCN3	Q9NQT6	498 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	CALY	Q9NYX4	217 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	DMXL1	Q9Y485	3027 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	RALGAPA1	Q6GYQ0	2036 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	PRSS38	A1L453	326 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	COX6A1	P12074	109 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	MAGEA5	P43359	124 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	ZNF137P	P52743	207 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	EDDM3B	P56851	147 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	LINC01620	Q4KN68	170 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	SFTPA2	Q8IWL1	248 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	C16orf92	Q96LL3	132 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	AGPAT4-IT1	Q9H0P7	198 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	DEPP	Q9NTK1	212 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	CACNG5	Q9UF02	275 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	CUL9	Q8IWT3	2517 aa		5.41	□□□□□ -1.54
TRIM6-205	ENST00000445329	FAM90A10P	A6NDY2	464 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	FAM90A20P	A6NIJ5	464 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	HIGD1C	A8MV81	97 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	NPIPB11	E5RHQ5	1161 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	LGALS1	P09382	135 aa	Known RBP	5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	HBB	P68871	147 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	PCOLCE	Q15113	449 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	LPAL2	Q16609	132 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	PMS2CL	Q68D20	193 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	C11orf52	Q96A22	123 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	SHANK2-AS3	Q9BTD1	123 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	CACNA1E	Q15878	2313 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	SPTY2D1-AS1	A0A0U1RR47	76 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	FRG2C	A6NGY1	282 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	PLXDC1	Q8IUK5	500 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	OR52N5	Q8NH56	324 aa		5.4	□□□□□ -1.54
TRIM6-205	ENST00000445329	CPAMD8	Q8IZJ3	1885 aa		5.4	□□□□□ -1.55
TRIM6-205	ENST00000445329	LILRA5	A6NI73	299 aa		5.4	□□□□□ -1.55
TRIM6-205	ENST00000445329	NPY	P01303	97 aa		5.4	□□□□□ -1.55
TRIM6-205	ENST00000445329	PMAIP1	Q13794	54 aa		5.4	□□□□□ -1.55
TRIM6-205	ENST00000445329	PRIMA1	Q86XR5	153 aa		5.4	□□□□□ -1.55
TRIM6-205	ENST00000445329	AAMDC	Q9H7C9	122 aa		5.4	□□□□□ -1.55
TRIM6-205	ENST00000445329	DKK2	Q9UBU2	259 aa		5.4	□□□□□ -1.55
TRIM6-205	ENST00000445329	KLF13	Q9Y2Y9	288 aa	Predicted RBP	5.4	□□□□□ -1.55
TRIM6-205	ENST00000445329	CABIN1	Q9Y6J0	2220 aa		5.4	□□□□□ -1.55
TRIM6-205	ENST00000445329	GPR179	Q6PRD1	2367 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	TEX49	A0A1B0GTD5	131 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	C17orf51	A8MQB3	221 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	PATE3	B3GLJ2	98 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	UBE2D3	P61077	147 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	UBE2D2	P62837	147 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	PRSS3P2	Q8NHM4	247 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	BORCS8	Q96FH0	119 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	STARD5	Q9NSY2	213 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	ALKBH4	Q9NXW9	302 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	C5orf63	A6NC05	138 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329		P01737	135 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	ZNF883	P0CG24	379 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	NXPH1	P58417	271 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	SRY	Q05066	204 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	EBI3	Q14213	229 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	CT83	Q5H943	113 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	IGFL2	Q6UWQ7	119 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	ZNF818P	Q6ZRF7	136 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329		Q6ZRM9	215 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	ATP5L2	Q7Z4Y8	100 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	OR5AS1	Q8N127	324 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	ZNF503	Q96F45	646 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	MRPL20	Q9BYC9	149 aa	Known RBP	5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	CACNA1H	O95180	2353 aa		5.39	□□□□□ -1.55
TRIM6-205	ENST00000445329	PGP	A6NDG6	321 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329		H3BTX0	84 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329	NDUFC2	O95298	119 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329	ATP5G1	P05496	136 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329	SLC25A16	P16260	332 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329	NSUN5P1	Q3KNT7	163 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329	VMA21	Q3ZAQ7	101 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329		Q6P435	159 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329	DRAM1	Q8N682	238 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329	PATE1	Q8WXA2	126 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329	C17orf77	Q96MU5	243 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329	TRGV9	Q99603	122 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329	TRAV17	A0A0B4J275	112 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329		A0A1B0GXF2	115 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329	STATH	P02808	62 aa		5.38	□□□□□ -1.55
TRIM6-205	ENST00000445329	CD164	Q04900	197 aa		5.38	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms